BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0105.0007.p         (100 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770754.1| hypothetical protein blr4114 [Bradyrhizobium ja...   154   4e-36
ref|YP_002362909.1| hypothetical protein Msil_2624 [Methylocella...   137   4e-31
ref|ZP_03698771.1| protein of unknown function DUF485 [Lutiella ...   122   2e-26
ref|YP_003447334.1| inner membrane protein [Azospirillum sp. B51...   117   4e-25
ref|YP_002795227.1| Membrane protein containing DUF485 [Laribact...   115   2e-24

>ref|NP_770754.1| hypothetical protein blr4114 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49379.1| blr4114 [Bradyrhizobium japonicum USDA 110]
          Length = 100

 Score =  154 bits (389), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 75/100 (75%), Positives = 86/100 (86%)

Query: 1   LTTYEQIEQDPNYQELVRRRSSLGWMLSAIMLIVYFGFILLVAYAPHFLGTPMGTGVTTI 60
           ++   +IE+DPNYQELVRRRSSLGWMLSA+ML+VYFGFILLVAYAP FLG P+G+GVTTI
Sbjct: 1   MSNLAKIERDPNYQELVRRRSSLGWMLSAVMLVVYFGFILLVAYAPKFLGIPLGSGVTTI 60

Query: 61  GIPIGLLVIVSAFLLTGIYVSKANSKYDPLIREIVGARRQ 100
           GIPIGL VIV AFLLTGIYV +A+S YD LIR+IV   R 
Sbjct: 61  GIPIGLSVIVLAFLLTGIYVRQASSSYDVLIRKIVEENRS 100


>ref|YP_002362909.1| hypothetical protein Msil_2624 [Methylocella silvestris BL2]
 gb|ACK51547.1| protein of unknown function DUF485 [Methylocella silvestris BL2]
          Length = 101

 Score =  137 bits (346), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 66/96 (68%), Positives = 79/96 (82%)

Query: 4   YEQIEQDPNYQELVRRRSSLGWMLSAIMLIVYFGFILLVAYAPHFLGTPMGTGVTTIGIP 63
           YE I+++P Y ELV+ RSS GW L+AIML +YFGFILL+AYAP FLGTP+GTGV TIGIP
Sbjct: 6   YESIQRNPKYIELVKTRSSFGWTLAAIMLAIYFGFILLIAYAPKFLGTPIGTGVMTIGIP 65

Query: 64  IGLLVIVSAFLLTGIYVSKANSKYDPLIREIVGARR 99
           IGL VI+SAF+L GIYV +AN+ YD LIR+IV   R
Sbjct: 66  IGLAVIISAFVLVGIYVLRANATYDGLIRDIVEESR 101


>ref|ZP_03698771.1| protein of unknown function DUF485 [Lutiella nitroferrum 2002]
 ref|YP_004848200.1| hypothetical protein NH8B_2995 [Pseudogulbenkiania sp. NH8B]
 gb|EEG08070.1| protein of unknown function DUF485 [Lutiella nitroferrum 2002]
 dbj|BAK77786.1| protein of unknown function [Pseudogulbenkiania sp. NH8B]
          Length = 103

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/97 (55%), Positives = 81/97 (83%), Gaps = 1/97 (1%)

Query: 5   EQIEQDPNYQELVRRRSSLGWMLSAIMLIVYFGFILLVAYAPHFLGTPMGTG-VTTIGIP 63
           ++++ +P + ELV +++SLGW LSA+ML++Y+GFILL+A+AP  LGTP+  G VTT+GIP
Sbjct: 7   KRVQSNPKFLELVHKKTSLGWTLSAVMLVIYYGFILLLAFAPKVLGTPLSEGSVTTVGIP 66

Query: 64  IGLLVIVSAFLLTGIYVSKANSKYDPLIREIVGARRQ 100
           IG+L+I+SAF+LTG+YV KAN+++D L +EIV   +Q
Sbjct: 67  IGVLIILSAFVLTGVYVRKANTEFDQLNQEIVEEAKQ 103


>ref|YP_003447334.1| inner membrane protein [Azospirillum sp. B510]
 dbj|BAI70790.1| inner membrane protein [Azospirillum sp. B510]
          Length = 100

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 73/91 (80%)

Query: 5  EQIEQDPNYQELVRRRSSLGWMLSAIMLIVYFGFILLVAYAPHFLGTPMGTGVTTIGIPI 64
          ++I  +P +QELV +RS+  W LS  ML++YFGFILLVA+  +FLGTP+G+GVTT GIPI
Sbjct: 6  QRIVNNPKFQELVAKRSAFAWTLSIAMLVIYFGFILLVAFGRNFLGTPIGSGVTTWGIPI 65

Query: 65 GLLVIVSAFLLTGIYVSKANSKYDPLIREIV 95
          G+  I+SAF+LTGIYV +AN ++D L R+I+
Sbjct: 66 GVFTILSAFILTGIYVHRANGEFDELNRQIL 96


>ref|YP_002795227.1| Membrane protein containing DUF485 [Laribacter hongkongensis
          HLHK9]
 gb|ACO74217.1| Membrane protein containing DUF485 [Laribacter hongkongensis
          HLHK9]
          Length = 102

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 47/91 (51%), Positives = 76/91 (83%)

Query: 5  EQIEQDPNYQELVRRRSSLGWMLSAIMLIVYFGFILLVAYAPHFLGTPMGTGVTTIGIPI 64
          ++++Q+P + ELV +++SLGW LS +ML +Y+GF+L++A+APH LG  +G GV T+GIP+
Sbjct: 7  KRVQQNPKFAELVHKKTSLGWTLSIVMLAIYYGFVLVLAFAPHSLGARIGDGVITLGIPV 66

Query: 65 GLLVIVSAFLLTGIYVSKANSKYDPLIREIV 95
          G+ +IVSAF+LTGIYV KAN+++D L ++++
Sbjct: 67 GVAIIVSAFVLTGIYVRKANTEFDQLNQQVI 97