BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0105.0003.p         (144 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001242612.1| hypothetical protein BBta_6819 [Bradyrhizobi...   223   7e-57
ref|YP_001203378.1| hypothetical protein BRADO1235 [Bradyrhizobi...   223   9e-57
ref|NP_774035.1| hypothetical protein bll7395 [Bradyrhizobium ja...   207   4e-52
ref|YP_001993582.1| phasin [Rhodopseudomonas palustris TIE-1] >g...   192   1e-47
ref|NP_949473.1| hypothetical protein RPA4137 [Rhodopseudomonas ...   192   2e-47

>ref|YP_001242612.1| hypothetical protein BBta_6819 [Bradyrhizobium sp. BTAi1]
 gb|ABQ38706.1| hypothetical protein BBta_6819 [Bradyrhizobium sp. BTAi1]
          Length = 144

 Score =  223 bits (568), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 108/144 (75%), Positives = 125/144 (86%)

Query: 1   MTNPSDPFSASIIPFEVPEQMRAFAEKGVLQARDSYAKFKDAAETHNSTVEAVFTSVSKG 60
           MTN +DPFSASIIPFEVPEQ+RA AEKGV QAR++YAKFKDAAETHNS +EA F + SKG
Sbjct: 1   MTNATDPFSASIIPFEVPEQVRALAEKGVSQARENYAKFKDAAETHNSAIEAFFANASKG 60

Query: 61  ASAYSAKLVEFFKANTTSSLDFAQELFSVKSPTEAVELWTSHARKQFETYTAQAKELAEL 120
           A  YS+K++EF KANTT+SLDFAQELF VKSP+EA+ELW+   RKQFET+T QAKELAEL
Sbjct: 61  AGTYSSKVMEFTKANTTASLDFAQELFGVKSPSEALELWSGFVRKQFETFTGQAKELAEL 120

Query: 121 GQKVASETAEPIKASASKFYKPAA 144
           GQKVA+ET EPIK SA+K +K AA
Sbjct: 121 GQKVATETVEPIKESATKLFKTAA 144


>ref|YP_001203378.1| hypothetical protein BRADO1235 [Bradyrhizobium sp. ORS 278]
 emb|CAL75141.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 144

 Score =  223 bits (567), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 109/144 (75%), Positives = 124/144 (86%)

Query: 1   MTNPSDPFSASIIPFEVPEQMRAFAEKGVLQARDSYAKFKDAAETHNSTVEAVFTSVSKG 60
           MTN +DPFSASIIPFEVPEQ+RA AEKGV QAR++YAKFKDAAETHNS +EA F + SKG
Sbjct: 1   MTNATDPFSASIIPFEVPEQVRALAEKGVSQARENYAKFKDAAETHNSAIEAFFANASKG 60

Query: 61  ASAYSAKLVEFFKANTTSSLDFAQELFSVKSPTEAVELWTSHARKQFETYTAQAKELAEL 120
           A AYS+K++EF KANTT+SLDFAQELF VKSP++A+ELWT   RKQFET+TAQAKEL EL
Sbjct: 61  AGAYSSKVMEFTKANTTASLDFAQELFGVKSPSDAMELWTGFVRKQFETFTAQAKELGEL 120

Query: 121 GQKVASETAEPIKASASKFYKPAA 144
           GQKVA ET EPIK SA+K  K AA
Sbjct: 121 GQKVAVETVEPIKESATKLLKTAA 144


>ref|NP_774035.1| hypothetical protein bll7395 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52660.1| bll7395 [Bradyrhizobium japonicum USDA 110]
          Length = 144

 Score =  207 bits (528), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 104/144 (72%), Positives = 122/144 (84%)

Query: 1   MTNPSDPFSASIIPFEVPEQMRAFAEKGVLQARDSYAKFKDAAETHNSTVEAVFTSVSKG 60
           MT  +DPFSASIIPFEVPEQ+RAFAEKGV QAR+SYAKFKDAAE+HN T+EAVF+S SKG
Sbjct: 1   MTGATDPFSASIIPFEVPEQVRAFAEKGVSQARESYAKFKDAAESHNGTIEAVFSSASKG 60

Query: 61  ASAYSAKLVEFFKANTTSSLDFAQELFSVKSPTEAVELWTSHARKQFETYTAQAKELAEL 120
           A+ Y+AKL+EF KANTT+ LDF QEL  VKSP++A  LW+SH +KQ ET+ AQAKELAE+
Sbjct: 61  ANEYTAKLMEFMKANTTAHLDFTQELLGVKSPSDAFALWSSHGKKQLETFQAQAKELAEI 120

Query: 121 GQKVASETAEPIKASASKFYKPAA 144
            Q+ A+  AEPIKASASK Y PAA
Sbjct: 121 AQRAATAAAEPIKASASKLYPPAA 144


>ref|YP_001993582.1| phasin [Rhodopseudomonas palustris TIE-1]
 gb|ACF03107.1| phasin [Rhodopseudomonas palustris TIE-1]
          Length = 143

 Score =  192 bits (488), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 94/144 (65%), Positives = 115/144 (79%), Gaps = 1/144 (0%)

Query: 1   MTNPSDPFSASIIPFEVPEQMRAFAEKGVLQARDSYAKFKDAAETHNSTVEAVFTSVSKG 60
           M + SDPFS +++PF++PEQ+RAFAEKGV QAR+SYAK KD AET N T+EAVFTS SKG
Sbjct: 1   MADSSDPFS-TVLPFQLPEQVRAFAEKGVSQARESYAKLKDVAETQNGTIEAVFTSASKG 59

Query: 61  ASAYSAKLVEFFKANTTSSLDFAQELFSVKSPTEAVELWTSHARKQFETYTAQAKELAEL 120
           A+ YS K+ +F K NT++S DFAQ L   K+  + +ELWTSHA+KQ ET TAQ KEL EL
Sbjct: 60  ATDYSTKVFDFVKTNTSASFDFAQNLIGAKTLPDVMELWTSHAKKQIETLTAQTKELTEL 119

Query: 121 GQKVASETAEPIKASASKFYKPAA 144
            QKVA+ET EPIKA+ASK +KPAA
Sbjct: 120 TQKVAAETVEPIKANASKIFKPAA 143


>ref|NP_949473.1| hypothetical protein RPA4137 [Rhodopseudomonas palustris CGA009]
 emb|CAE29578.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 143

 Score =  192 bits (487), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 94/144 (65%), Positives = 115/144 (79%), Gaps = 1/144 (0%)

Query: 1   MTNPSDPFSASIIPFEVPEQMRAFAEKGVLQARDSYAKFKDAAETHNSTVEAVFTSVSKG 60
           M + SDPFS +++PF++PEQ+RAFAEKGV QAR+SYAK KD AET N T+EAVFTS SKG
Sbjct: 1   MADSSDPFS-TVLPFQLPEQVRAFAEKGVSQARESYAKLKDVAETQNGTIEAVFTSASKG 59

Query: 61  ASAYSAKLVEFFKANTTSSLDFAQELFSVKSPTEAVELWTSHARKQFETYTAQAKELAEL 120
           A+ YS K+ +F K NT++S DFAQ L   K+  + +ELWTSHA+KQ ET TAQ KEL EL
Sbjct: 60  ATDYSTKVFDFVKTNTSASFDFAQSLIGAKTLPDVMELWTSHAKKQIETLTAQTKELTEL 119

Query: 121 GQKVASETAEPIKASASKFYKPAA 144
            QKVA+ET EPIKA+ASK +KPAA
Sbjct: 120 TQKVAAETVEPIKANASKIFKPAA 143