BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0104.0109.p (387 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774251.1| hypothetical protein bll7611 [Bradyrhizobium ja... 656 0.0 ref|NP_085764.1| hypothetical protein mlr9221 [Mesorhizobium lot... 397 e-108 ref|NP_774548.1| hypothetical protein bll7908 [Bradyrhizobium ja... 384 e-104 ref|ZP_08628889.1| hypothetical protein CSIRO_1974 [Bradyrhizobi... 377 e-102 ref|YP_001240219.1| hypothetical protein BBta_4261 [Bradyrhizobi... 362 7e-98 >ref|NP_774251.1| hypothetical protein bll7611 [Bradyrhizobium japonicum USDA 110] dbj|BAC52876.1| bll7611 [Bradyrhizobium japonicum USDA 110] Length = 354 Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust. Identities = 309/352 (87%), Positives = 332/352 (94%) Query: 34 MAATRIDCDIHPAVGGTRTTLLPYLSDHWKEQVVSRAIDGLDLNSYPPSMPLSGRADWRP 93 MAATRIDCDIHPAVGGTRTTLLPYLSDHWKEQVVSRAIDGLDL SYPPSMPLSGRADWRP Sbjct: 1 MAATRIDCDIHPAVGGTRTTLLPYLSDHWKEQVVSRAIDGLDLTSYPPSMPLSGRADWRP 60 Query: 94 ADGSKPGSDLAMVQRGAFDQLGASHAICNVVYGAQAVFDSYMAADFCKAINDWIAAEWLA 153 A+G+KPGSDLAMVQ+GAFDQLGASHAI NV+YGAQAVFD+YMAADFCKAINDWIAAEWLA Sbjct: 61 ANGAKPGSDLAMVQKGAFDQLGASHAILNVLYGAQAVFDAYMAADFCKAINDWIAAEWLA 120 Query: 154 RDKRLRASIVVPIQAPDLAVEEIERRAGDNRFVSVLVPSQGETLLGRRHYWPIYQAAEKY 213 RD RLRASIVVP+QAPDLA+EEIERRAGDNRFVS+LV +QGETLLGRRH+WP+YQ AEKY Sbjct: 121 RDSRLRASIVVPMQAPDLAIEEIERRAGDNRFVSILVLAQGETLLGRRHFWPVYQLAEKY 180 Query: 214 KLPIAIHAGSAYRGAPSSIGWPSYRYEYYLAEAQAFQAQTLSLIYEGVFGKYPGLTVVLM 273 KLP+AIHAG+ YR APSS GWPS+RYEYY EAQAFQAQ LSLIYEGVFGKYP L VVLM Sbjct: 181 KLPLAIHAGTQYRQAPSSAGWPSHRYEYYFVEAQAFQAQILSLIYEGVFGKYPNLKVVLM 240 Query: 274 ESGVSWLPAFMWRANKTWRGVRVEVPWVEREPAAIIRDHFRVTMQPFDAPLDPTSVADII 333 ESGVSWLPAFMWRANKTWRGVRVEVPWVEREPA+IIRD+FRVTMQPFDAP D SV +II Sbjct: 241 ESGVSWLPAFMWRANKTWRGVRVEVPWVEREPASIIRDNFRVTMQPFDAPSDAKSVEEII 300 Query: 334 DQIGSDKMFLFASDYPHWQFDGDDPIPPHLPRSLVQRMCADNPLETFPRLKL 385 DQIGS+KMFLFASDYPHWQFDGDDPIPP+LP+S++ +MC DNPLETFPRL L Sbjct: 301 DQIGSEKMFLFASDYPHWQFDGDDPIPPNLPKSIIAKMCVDNPLETFPRLSL 352 >ref|NP_085764.1| hypothetical protein mlr9221 [Mesorhizobium loti MAFF303099] dbj|BAB54605.1| mlr9221 [Mesorhizobium loti MAFF303099] Length = 357 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 193/348 (55%), Positives = 245/348 (70%), Gaps = 4/348 (1%) Query: 39 IDCDIHPAVGGTRTTLLPYLSDHWKEQVVSRAID--GLDLNSYPPSMPLSGRADWRPADG 96 IDCD+H A+ TR LLPYL D+W+E V+ R +D L+L+SYPPS+PLS R DWRP G Sbjct: 12 IDCDVHVALPDTRA-LLPYLDDYWREHVIRRGLDREDLELSSYPPSLPLSCRPDWRPQQG 70 Query: 97 SKPGSDLAMVQRGAFDQLGASHAICNVVYGAQAVFDSYMAADFCKAINDWIAAEWLARDK 156 PGS ++ D + AICNV++G+Q +F ++A C+AIN+WI+AEWL RD Sbjct: 71 -LPGSQFEQLRDQVLDPFQSRFAICNVLHGSQIMFSEDLSAALCRAINNWISAEWLDRDP 129 Query: 157 RLRASIVVPIQAPDLAVEEIERRAGDNRFVSVLVPSQGETLLGRRHYWPIYQAAEKYKLP 216 RLRASIVVP+ +P+LAV EIE RA D RFV VL+ + GE LGRR WPIY AAE++ LP Sbjct: 130 RLRASIVVPVHSPELAVAEIEHRAADLRFVQVLMLAMGEVPLGRRQNWPIYAAAERHDLP 189 Query: 217 IAIHAGSAYRGAPSSIGWPSYRYEYYLAEAQAFQAQTLSLIYEGVFGKYPGLTVVLMESG 276 I IHAGS+ R PS +GW S+ + Y+++A F SL+ EGVF K+P L VVL+ESG Sbjct: 190 IGIHAGSSLRNPPSPLGWSSHYIDDYVSQAPGFSGALNSLVVEGVFNKFPRLKVVLLESG 249 Query: 277 VSWLPAFMWRANKTWRGVRVEVPWVEREPAAIIRDHFRVTMQPFDAPLDPTSVADIIDQI 336 V+WLPA +WRANK WRGVR E PW+ R P+ IIR+H R+T+QPFDAP V IIDQI Sbjct: 250 VTWLPAHLWRANKQWRGVRSETPWLTRPPSEIIREHVRLTVQPFDAPPTDGQVQTIIDQI 309 Query: 337 GSDKMFLFASDYPHWQFDGDDPIPPHLPRSLVQRMCADNPLETFPRLK 384 GSD+M LF++DYPHW FDG D +P L + +M ADN L T+PRL Sbjct: 310 GSDEMLLFSTDYPHWHFDGTDAVPQGLSHESLSKMLADNALATYPRLN 357 >ref|NP_774548.1| hypothetical protein bll7908 [Bradyrhizobium japonicum USDA 110] dbj|BAC53173.1| bll7908 [Bradyrhizobium japonicum USDA 110] Length = 361 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 184/356 (51%), Positives = 244/356 (68%), Gaps = 5/356 (1%) Query: 31 GNAMA---ATRIDCDIHPAVGGTRTTLLPYLSDHWKEQVVSRAIDGLDLNSYPPSMPLSG 87 G+ MA A +DCD+HPAV T+LLPYL+D+W++QV +R + L SYP + P+ Sbjct: 7 GDVMASLIAGGVDCDVHPAVPHL-TSLLPYLNDYWRDQVTTRGMMDLVSQSYPQNSPIVA 65 Query: 88 RADWRPADGSKPGSDLAMVQRGAFDQLGASHAICNVVYGAQAVFDSYMAADFCKAINDWI 147 R DWRP G KPG+ L +QR D SHAICN +Y Q VF M A FC+A+NDW+ Sbjct: 66 RPDWRPESG-KPGASLEDMQRHVLDPFQVSHAICNPLYAVQMVFSEDMQAAFCRALNDWL 124 Query: 148 AAEWLARDKRLRASIVVPIQAPDLAVEEIERRAGDNRFVSVLVPSQGETLLGRRHYWPIY 207 EWL RDKRLR SIV+P Q+ + AV EIER A D RFV VL+ G+ LG+R WPIY Sbjct: 125 VKEWLDRDKRLRGSIVIPTQSVEKAVAEIERCAHDRRFVQVLMLVMGDVPLGKRALWPIY 184 Query: 208 QAAEKYKLPIAIHAGSAYRGAPSSIGWPSYRYEYYLAEAQAFQAQTLSLIYEGVFGKYPG 267 +AAE+ L + IHAGSAY P+++GW SY E Y+ +AQAFQ Q S+I EGVF KYP Sbjct: 185 EAAERLDLAVGIHAGSAYHNPPTAVGWGSYHIEDYVGQAQAFQTQLTSVIVEGVFAKYPR 244 Query: 268 LTVVLMESGVSWLPAFMWRANKTWRGVRVEVPWVEREPAAIIRDHFRVTMQPFDAPLDPT 327 L +V++ESGVSW+ F+WR +K WRGVR+E PWV+R P ++R + R ++QPFDAP +P Sbjct: 245 LKMVMLESGVSWISPFLWRLHKFWRGVRMETPWVDRAPLELVRSNIRFSLQPFDAPPEPE 304 Query: 328 SVADIIDQIGSDKMFLFASDYPHWQFDGDDPIPPHLPRSLVQRMCADNPLETFPRL 383 ++ + D + SD++ LF++DYPHWQFDG D +P L LV+++ DNP T+PRL Sbjct: 305 TLIRLFDHMQSDELVLFSTDYPHWQFDGQDALPQGLTPDLVRKIMIDNPHATYPRL 360 >ref|ZP_08628889.1| hypothetical protein CSIRO_1974 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08248.1| hypothetical protein CSIRO_1974 [Bradyrhizobiaceae bacterium SG-6C] Length = 350 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 182/359 (50%), Positives = 251/359 (69%), Gaps = 13/359 (3%) Query: 26 KKINPGNAMAATRIDCDIHPAVGGTRTTLLPYLSDHWKEQVVSRAIDGLDLNSYPPSMPL 85 +++NP +IDCD+H + T+ LLP+L D+W+EQV SR ID L+L S +MP Sbjct: 3 QRVNP-----TPKIDCDLHVTLPTTQK-LLPFLDDYWREQVTSRGIDRLELTSDLSNMPP 56 Query: 86 SGRADWRPADGSKPGSDLAMVQRGAFDQLGASHAICNVVYGAQAVFDSYMAADFCKAIND 145 + R DWR +++ V++ A D +G+ AICN +YG+QAV++ +AA C+A ND Sbjct: 57 AVRPDWRGE------TEVDQVRKRALDDMGSDIAICNCLYGSQAVYNQDLAAALCRATND 110 Query: 146 WIAAEWLARDKRLRASIVVPIQAPDLAVEEIERRAGDNRFVSVLVPSQGETLLGRRHYWP 205 W+A EWL +D R RASIV+P Q+P+LA EEIERRA D RFV VL+ GE LG+R WP Sbjct: 111 WLAKEWLDKDDRFRASIVIPWQSPELAAEEIERRASDPRFVQVLMMVLGEVPLGKRQMWP 170 Query: 206 IYQAAEKYKLPIAIHAGSAYRGAPSSIGWPSYRYEYYLAEAQAFQAQTLSLIYEGVFGKY 265 IY AAEK+ LPI IH+G+ YR AP + GWPSY E +A++ FQ Q LSL+ EGVF ++ Sbjct: 171 IYAAAEKHGLPIGIHSGTIYRSAPWTNGWPSYHIEDQVAQSVGFQTQLLSLVAEGVFEQF 230 Query: 266 PGLTVVLMESGVSWLPAFMWRANKTWRGVRVEVPWVEREPAAIIRDHFRVTMQPFDAPLD 325 PGL VVL+ESGV+WLP+F+WR +K WRG+R+EVPW++R P+ I+++ R+TMQPFD P D Sbjct: 231 PGLNVVLLESGVTWLPSFLWRIDKLWRGLRMEVPWLKRAPSEIVKERVRLTMQPFDGPND 290 Query: 326 PTSVADIIDQIGSDKMFLFASDYPHWQFDGDDPIPPHLPRSLVQRMCADNPLETFPRLK 384 P V ++IDQIG D M LF++DYPHW F+G D P L+ ++ NP++T+ RL+ Sbjct: 291 PQIVREMIDQIGPD-MMLFSTDYPHWNFEGADFAPAGFDADLMAKLRTKNPMKTYARLQ 348 >ref|YP_001240219.1| hypothetical protein BBta_4261 [Bradyrhizobium sp. BTAi1] gb|ABQ36313.1| hypothetical protein BBta_4261 [Bradyrhizobium sp. BTAi1] Length = 366 Score = 362 bits (928), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 178/346 (51%), Positives = 242/346 (69%), Gaps = 7/346 (2%) Query: 39 IDCDIHPAVGGTRTTLLPYLSDHWKEQVVSRAIDGL--DLNSYPPSMPLSGRADWRPADG 96 IDCD+H A T LLP+L D+W++Q+V+RAID + + SYPP+ P+S RADWR Sbjct: 9 IDCDLHVA-APTIAELLPFLDDYWRDQLVNRAIDRMPFAMMSYPPNAPISMRADWRSTPA 67 Query: 97 SKPGSDLAMVQRGAFDQLGASHAICNVVYGAQAVFDSYMAADFCKAINDWIAAEWLARDK 156 + P L ++ A D G AI NV++G A+ MAA C+A+NDW+ +WL R+ Sbjct: 68 ATP---LDTLRAQALDPFGVQCAIVNVIHGCVALHHDDMAAALCRAVNDWLRVQWLDREP 124 Query: 157 RLRASIVVPIQAPDLAVEEIERRAGDNRFVSVLVPSQGETLLGRRHYWPIYQAAEKYKLP 216 RLR SI++ Q AV E+ER A D+RFV +L+ + GE LGRR ++P+Y AAE++ L Sbjct: 125 RLRGSILIHPQDIAQAVAEVERLASDSRFVQILMLAMGERPLGRREFFPLYAAAERHGLV 184 Query: 217 IAIHAGSAYRGAPSSIGWPSYRYEYYLAEAQAFQAQTLSLIYEGVFGKYPGLTVVLMESG 276 +A+HAGS YR AP+ +GWP Y++E Y+A+AQAF+ QT+SLI EGVF ++P L V +ESG Sbjct: 185 VAVHAGSTYRYAPTIVGWPCYQFEDYVAQAQAFENQTVSLIAEGVFQQFPKLKFVFLESG 244 Query: 277 VSWLPAFMWRANKTWRGVRVEVPWVEREPAAIIRDHFRVTMQPFDAPLDPTSVADIIDQI 336 VSWLP MWR +KTWRG R E PWV+R P+ IIR+H R+T QPFDAP D T+VA I +I Sbjct: 245 VSWLPVTMWRTDKTWRGARPETPWVDRWPSEIIREHIRLTTQPFDAP-DATAVAQTIARI 303 Query: 337 GSDKMFLFASDYPHWQFDGDDPIPPHLPRSLVQRMCADNPLETFPR 382 GSD M LFA+DYPHWQF+GDD +P +P + ++++ DN T+PR Sbjct: 304 GSDDMLLFATDYPHWQFEGDDVLPDGVPSATLRKLLIDNAQATYPR 349