BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0104.0102.p (156 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_316681.1| hypothetical protein Nwi_0061 [Nitrobacter wino... 276 6e-73 ref|YP_575430.1| hypothetical protein Nham_0069 [Nitrobacter ham... 275 1e-72 ref|ZP_01045126.1| hypothetical protein NB311A_08273 [Nitrobacte... 273 4e-72 ref|ZP_08070760.1| alkyl hydroperoxide reductase/ Thiol specific... 235 1e-60 ref|YP_002287263.1| thiol-disulfide isomerase and thioredoxins [... 200 7e-50 >ref|YP_316681.1| hypothetical protein Nwi_0061 [Nitrobacter winogradskyi Nb-255] gb|ABA03329.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 161 Score = 276 bits (707), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 133/149 (89%), Positives = 142/149 (95%) Query: 3 PAPELAASRWFNTSEPLTLAALRGRPVLLHAFQMLCPGCVAHGTPQTQRAFELFKHSDLQ 62 PAPELA S+WFNT+EP+TLAALRGRPVLLHAFQMLCPGCVAHGTPQTQRA ELFK +DLQ Sbjct: 6 PAPELAVSQWFNTAEPITLAALRGRPVLLHAFQMLCPGCVAHGTPQTQRAHELFKATDLQ 65 Query: 63 VIGLHTVFEHHAAMTEVSLEAFIHEYRLTFPIGVDEAGEGTPIPVTMQRYGMQGTPTSIL 122 VIGLHTVFEHHAAMT VSL+AFIHEYRLTFPIGVD AG+GTP+PVTM RYGMQGTPTSIL Sbjct: 66 VIGLHTVFEHHAAMTPVSLQAFIHEYRLTFPIGVDAAGDGTPLPVTMGRYGMQGTPTSIL 125 Query: 123 IGRDGNIVHQGFGQQSDMALGAIIAAELA 151 IGR+G IVHQGFGQQSDMALGA+IAAELA Sbjct: 126 IGRNGRIVHQGFGQQSDMALGAMIAAELA 154 >ref|YP_575430.1| hypothetical protein Nham_0069 [Nitrobacter hamburgensis X14] gb|ABE60970.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 164 Score = 275 bits (704), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 134/149 (89%), Positives = 139/149 (93%) Query: 3 PAPELAASRWFNTSEPLTLAALRGRPVLLHAFQMLCPGCVAHGTPQTQRAFELFKHSDLQ 62 PAPELA S+WFNT EPLTLAALRGRPVLLHAFQMLCPGCVAHGTPQTQRAFELFK +DLQ Sbjct: 7 PAPELAVSQWFNTGEPLTLAALRGRPVLLHAFQMLCPGCVAHGTPQTQRAFELFKATDLQ 66 Query: 63 VIGLHTVFEHHAAMTEVSLEAFIHEYRLTFPIGVDEAGEGTPIPVTMQRYGMQGTPTSIL 122 VIGLHTVFEHHAAMT VSL+AFIHEY LTFPIGVD AGEGTP+PVTM RY MQGTPTSIL Sbjct: 67 VIGLHTVFEHHAAMTPVSLQAFIHEYGLTFPIGVDAAGEGTPLPVTMSRYRMQGTPTSIL 126 Query: 123 IGRDGNIVHQGFGQQSDMALGAIIAAELA 151 IGRDG IVH GFGQQSDMALGA+IAAELA Sbjct: 127 IGRDGRIVHHGFGQQSDMALGAMIAAELA 155 >ref|ZP_01045126.1| hypothetical protein NB311A_08273 [Nitrobacter sp. Nb-311A] gb|EAQ37131.1| hypothetical protein NB311A_08273 [Nitrobacter sp. Nb-311A] Length = 169 Score = 273 bits (699), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 129/148 (87%), Positives = 141/148 (95%) Query: 4 APELAASRWFNTSEPLTLAALRGRPVLLHAFQMLCPGCVAHGTPQTQRAFELFKHSDLQV 63 APELA S+WFNT+EP+TLAALRGRPVLLHAFQMLCPGCVAHGTPQTQRA+ELFK +DLQV Sbjct: 15 APELAVSQWFNTAEPMTLAALRGRPVLLHAFQMLCPGCVAHGTPQTQRAYELFKATDLQV 74 Query: 64 IGLHTVFEHHAAMTEVSLEAFIHEYRLTFPIGVDEAGEGTPIPVTMQRYGMQGTPTSILI 123 IGLHTVFEHHAAMT +SL+AFIHEYRLTFPIGVD AG+GTP+PVTM RYGMQGTPTS+LI Sbjct: 75 IGLHTVFEHHAAMTPISLQAFIHEYRLTFPIGVDAAGDGTPLPVTMGRYGMQGTPTSVLI 134 Query: 124 GRDGNIVHQGFGQQSDMALGAIIAAELA 151 GR+G IVH GFGQQSDMALGA+IAAELA Sbjct: 135 GRNGRIVHHGFGQQSDMALGAMIAAELA 162 >ref|ZP_08070760.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Methylocystis sp. ATCC 49242] gb|EFY01287.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Methylocystis sp. ATCC 49242] Length = 159 Score = 235 bits (600), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 111/148 (75%), Positives = 128/148 (86%) Query: 4 APELAASRWFNTSEPLTLAALRGRPVLLHAFQMLCPGCVAHGTPQTQRAFELFKHSDLQV 63 APEL+ +RWFNT P+TLA+LRGR VLLHAFQMLCPGCVAHGTPQ Q+A LF+++DL V Sbjct: 6 APELSVTRWFNTPAPVTLASLRGRVVLLHAFQMLCPGCVAHGTPQAQKAHSLFRNTDLAV 65 Query: 64 IGLHTVFEHHAAMTEVSLEAFIHEYRLTFPIGVDEAGEGTPIPVTMQRYGMQGTPTSILI 123 IGLHTVFEHHAAMT VSLEAFIHEYRLTFPIGVD GE PIPVTM+RY M+GTPTSI+I Sbjct: 66 IGLHTVFEHHAAMTPVSLEAFIHEYRLTFPIGVDAPGEDGPIPVTMRRYEMRGTPTSIVI 125 Query: 124 GRDGNIVHQGFGQQSDMALGAIIAAELA 151 GRDG I H GFGQ+ DMALGA++ + ++ Sbjct: 126 GRDGRIRHHGFGQEDDMALGALLGSLIS 153 >ref|YP_002287263.1| thiol-disulfide isomerase and thioredoxins [Oligotropha carboxidovorans OM5] ref|YP_004631238.1| hypothetical protein OCA5_c02680 [Oligotropha carboxidovorans OM5] gb|ACI91398.1| thiol-disulfide isomerase and thioredoxins [Oligotropha carboxidovorans OM5] gb|AEI01422.1| hypothetical protein OCA4_c02670 [Oligotropha carboxidovorans OM4] gb|AEI04997.1| hypothetical protein OCA5_c02680 [Oligotropha carboxidovorans OM5] Length = 156 Score = 200 bits (508), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 100/153 (65%), Positives = 112/153 (73%) Query: 1 VTPAPELAASRWFNTSEPLTLAALRGRPVLLHAFQMLCPGCVAHGTPQTQRAFELFKHSD 60 +T APELA S+WFNT PLTLA LRGR V+LHAFQMLCPGCV G PQ QR LF Sbjct: 1 MTQAPELAISQWFNTDTPLTLAQLRGRVVVLHAFQMLCPGCVQGGIPQAQRIANLFSPDK 60 Query: 61 LQVIGLHTVFEHHAAMTEVSLEAFIHEYRLTFPIGVDEAGEGTPIPVTMQRYGMQGTPTS 120 + VIGLHTVFEHH AMT V+L+AF+HEYR+TFP+GVD GE TPIP TM YGMQGTPT Sbjct: 61 VAVIGLHTVFEHHDAMTPVALKAFLHEYRITFPVGVDVPGECTPIPQTMAAYGMQGTPTL 120 Query: 121 ILIGRDGNIVHQGFGQQSDMALGAIIAAELAAP 153 ILI R G I GFG + D+ +GA IA A P Sbjct: 121 ILIDRAGRIRKHGFGAEDDLRVGADIALLTAEP 153