BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0104.0098.p (222 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_534706.1| hypothetical protein RPC_4865 [Rhodopseudomonas... 326 1e-87 ref|ZP_01044568.1| hypothetical protein NB311A_03539 [Nitrobacte... 326 2e-87 ref|YP_568084.1| hypothetical protein RPD_0945 [Rhodopseudomonas... 319 2e-85 ref|YP_317197.1| hypothetical protein Nwi_0578 [Nitrobacter wino... 314 7e-84 ref|NP_950068.1| hypothetical protein RPA4734 [Rhodopseudomonas ... 313 2e-83 >ref|YP_534706.1| hypothetical protein RPC_4865 [Rhodopseudomonas palustris BisB18] gb|ABD90387.1| protein of unknown function DUF218 [Rhodopseudomonas palustris BisB18] Length = 240 Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 163/211 (77%), Positives = 177/211 (83%), Gaps = 2/211 (0%) Query: 1 MSLQSDDTSPNGFAARPR--GWLRAAIVAPLALAFVAAAVGFVGFLSQLRGVETDPPHNA 58 M+ SD PN A P LRAAIVA LA+ FV A GFV FLSQLRG E P NA Sbjct: 1 MTQPSDQDPPNLAAGAPPRCSGLRAAIVATLAIGFVGMASGFVVFLSQLRGAEIQPGRNA 60 Query: 59 DGIVVLTGGSSRVSDAMELLAAGYGKRLLISGVHPTNDAHDISRTVPDSQGLMRCCVDLD 118 DGIVVLTGGSSRVSDA+ELLAAGYG+RLLISGVHPTN A+DISR++PDSQ L+ CCVDLD Sbjct: 61 DGIVVLTGGSSRVSDAIELLAAGYGRRLLISGVHPTNGANDISRSLPDSQQLLSCCVDLD 120 Query: 119 RSAVNTRSNAAETRRWARERGFKSLIVVTSNYHMPRALVELSHAMPDVTLIPFAVVGDKW 178 RSA+NTRSNAAE RRWA ERGF SLIVVTSNYHMPRA+VE+SHAMPD+ LIPFAVVGDKW Sbjct: 121 RSAINTRSNAAEARRWAHERGFHSLIVVTSNYHMPRAIVEMSHAMPDIELIPFAVVGDKW 180 Query: 179 RDEPWWTSGGTFRLLLSEYAKYVAAEMRVRL 209 RD+PWWTSG TFRLLLSEYAKY+AAE RVRL Sbjct: 181 RDDPWWTSGATFRLLLSEYAKYIAAEARVRL 211 >ref|ZP_01044568.1| hypothetical protein NB311A_03539 [Nitrobacter sp. Nb-311A] gb|EAQ37349.1| hypothetical protein NB311A_03539 [Nitrobacter sp. Nb-311A] Length = 239 Score = 326 bits (835), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 157/198 (79%), Positives = 174/198 (87%) Query: 12 GFAARPRGWLRAAIVAPLALAFVAAAVGFVGFLSQLRGVETDPPHNADGIVVLTGGSSRV 71 G +AR RG L A +VA +AFV A VGFVGFLSQLRGVET P +NADGIVVLTGGSSR+ Sbjct: 15 GMSARRRGMLLATLVAAAGIAFVGAGVGFVGFLSQLRGVETKPVNNADGIVVLTGGSSRI 74 Query: 72 SDAMELLAAGYGKRLLISGVHPTNDAHDISRTVPDSQGLMRCCVDLDRSAVNTRSNAAET 131 SDA+ELLA GYGKRLLISGVHPTN DISR++PDSQ L+ CCVDLDRSAVNTRSNA+ET Sbjct: 75 SDAVELLAGGYGKRLLISGVHPTNGVSDISRSLPDSQQLLTCCVDLDRSAVNTRSNASET 134 Query: 132 RRWARERGFKSLIVVTSNYHMPRALVELSHAMPDVTLIPFAVVGDKWRDEPWWTSGGTFR 191 RRW E+GF+SLIVVTSNYHMPRA+VELSHAMP+VTLIPFAV+GDKWR+EPWWTSG T R Sbjct: 135 RRWVDEQGFRSLIVVTSNYHMPRAIVELSHAMPNVTLIPFAVIGDKWREEPWWTSGTTLR 194 Query: 192 LLLSEYAKYVAAEMRVRL 209 LLLSEY KY+AAE RVRL Sbjct: 195 LLLSEYVKYLAAEARVRL 212 >ref|YP_568084.1| hypothetical protein RPD_0945 [Rhodopseudomonas palustris BisB5] gb|ABE38183.1| protein of unknown function DUF218 [Rhodopseudomonas palustris BisB5] Length = 241 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 165/210 (78%), Positives = 175/210 (83%), Gaps = 2/210 (0%) Query: 4 QSDDTSPNGFAARPRGWLRAAIVAPLALAFVAAAVGFVGFLSQLRGVETDPPHNADGIVV 63 Q T+P A RP G LRA IVA LAL FVA A GFV FL+QLRG E P ADGIVV Sbjct: 8 QPTRTAPGKPARRP-GRLRAVIVATLALGFVATAAGFVAFLAQLRGAELKPNRTADGIVV 66 Query: 64 LTGGSSRVSDAMELLAAGYGKRLLISGVHPTNDAHDISRTVPDSQGLMRCCVDLDRSAVN 123 LTGGSSRVSDA+ELLA+GYGKRLLISGVH TN A DISR+VPDS+ + CCVDLDRSAVN Sbjct: 67 LTGGSSRVSDAVELLASGYGKRLLISGVHRTNGASDISRSVPDSKDWLDCCVDLDRSAVN 126 Query: 124 TRSNAAETRRWARERGFKSLIVVTSNYHMPRALVELSHAMPDVTLIPFAVVGDKWRDEPW 183 TRSNAAETRRWA ERGF SLIVVTSNYHMPRA+VE+SHAMPDV LIPFAV+GDKWRDEPW Sbjct: 127 TRSNAAETRRWAHERGFHSLIVVTSNYHMPRAIVEMSHAMPDVELIPFAVIGDKWRDEPW 186 Query: 184 WTSGGTFRLLLSEYAKYVAAEMRVRLXARL 213 WTSG T RLLLSEYAKYVA E RVRL ARL Sbjct: 187 WTSGATLRLLLSEYAKYVAVEARVRL-ARL 215 >ref|YP_317197.1| hypothetical protein Nwi_0578 [Nitrobacter winogradskyi Nb-255] gb|ABA03845.1| Protein of unknown function DUF218 [Nitrobacter winogradskyi Nb-255] Length = 241 Score = 314 bits (804), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 151/189 (79%), Positives = 167/189 (88%) Query: 21 LRAAIVAPLALAFVAAAVGFVGFLSQLRGVETDPPHNADGIVVLTGGSSRVSDAMELLAA 80 L A +VA +AFV AAVGFVGFLSQLRGVET P NADGIVVLTGGSSR+SDA++LLA Sbjct: 24 LLATLVAAAGIAFVGAAVGFVGFLSQLRGVETKPAANADGIVVLTGGSSRISDAVDLLAG 83 Query: 81 GYGKRLLISGVHPTNDAHDISRTVPDSQGLMRCCVDLDRSAVNTRSNAAETRRWARERGF 140 GYGKRLLISGVHPTN DISR++PDSQ L+ CCVDLDRSAVNTRSNA+ETRRW +GF Sbjct: 84 GYGKRLLISGVHPTNGVSDISRSLPDSQRLLTCCVDLDRSAVNTRSNASETRRWVDGQGF 143 Query: 141 KSLIVVTSNYHMPRALVELSHAMPDVTLIPFAVVGDKWRDEPWWTSGGTFRLLLSEYAKY 200 +SLIVVTSNYHMPRA+VELSHAMPDVTLIPFAV+G+KWR+EPWWTSG T RLLLSEY KY Sbjct: 144 RSLIVVTSNYHMPRAIVELSHAMPDVTLIPFAVIGEKWREEPWWTSGATLRLLLSEYVKY 203 Query: 201 VAAEMRVRL 209 +AAE RVRL Sbjct: 204 LAAEARVRL 212 >ref|NP_950068.1| hypothetical protein RPA4734 [Rhodopseudomonas palustris CGA009] emb|CAE30174.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 255 Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 153/191 (80%), Positives = 167/191 (87%) Query: 19 GWLRAAIVAPLALAFVAAAVGFVGFLSQLRGVETDPPHNADGIVVLTGGSSRVSDAMELL 78 G LRA IVA LAL F+ A GFV FLSQLRG E P HNADGIVVLTGGSSRVSDA+ELL Sbjct: 36 GRLRATIVAVLALGFLVGAGGFVVFLSQLRGAEQKPRHNADGIVVLTGGSSRVSDAVELL 95 Query: 79 AAGYGKRLLISGVHPTNDAHDISRTVPDSQGLMRCCVDLDRSAVNTRSNAAETRRWARER 138 AAGYGKRLLISGVH TN A DISR+VP+S+ CCVDLDRSAV+TRSNA+ETRRW +ER Sbjct: 96 AAGYGKRLLISGVHRTNGARDISRSVPESRDWFSCCVDLDRSAVDTRSNASETRRWVQER 155 Query: 139 GFKSLIVVTSNYHMPRALVELSHAMPDVTLIPFAVVGDKWRDEPWWTSGGTFRLLLSEYA 198 GF+SLIVVTSNYHMPRA+ E+SHAMPDV LIPFAV+GDKWRDEPWWTSGGT RLLLSEYA Sbjct: 156 GFRSLIVVTSNYHMPRAIAEMSHAMPDVELIPFAVIGDKWRDEPWWTSGGTLRLLLSEYA 215 Query: 199 KYVAAEMRVRL 209 KY+A E+RVRL Sbjct: 216 KYLAVELRVRL 226