BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0104.0097.p (313 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_576016.1| hypothetical protein Nham_0668 [Nitrobacter ham... 528 e-148 ref|NP_768031.1| cell division protein [Bradyrhizobium japonicum... 513 e-143 ref|YP_317196.1| hypothetical protein Nwi_0577 [Nitrobacter wino... 512 e-143 ref|YP_001237330.1| cell division ABC transporter membrane compo... 497 e-138 ref|ZP_01044569.1| hypothetical protein NB311A_03544 [Nitrobacte... 493 e-137 >ref|YP_576016.1| hypothetical protein Nham_0668 [Nitrobacter hamburgensis X14] gb|ABE61556.1| protein of unknown function DUF214 [Nitrobacter hamburgensis X14] Length = 323 Score = 528 bits (1359), Expect = e-148, Method: Compositional matrix adjust. Identities = 265/313 (84%), Positives = 291/313 (92%) Query: 1 LVDLGRERPQVPATARNMSPIVPRASISGRALVAVVAIMTFLASLTTGTVLLVSASAAEW 60 L+DLGRERPQVPA ARNMSPIVPRASI+GRALVAVVAIMTFLAS+TTG VLLVSASAA+W Sbjct: 11 LMDLGRERPQVPARARNMSPIVPRASIAGRALVAVVAIMTFLASITTGAVLLVSASAADW 70 Query: 61 QSEVSSEITIQVRPSPGRDLDRDAQAAVEAMRAQPGILEVRPFSKEESAKLLEPWLGSGL 120 QSEV+SEITIQVRP GRD++RD A AMRA+PGIL+VRP+++EESAKLLEPWLGSGL Sbjct: 71 QSEVASEITIQVRPVAGRDIERDVTAVAGAMRAEPGILDVRPYTREESAKLLEPWLGSGL 130 Query: 121 SIDELPVPRVIVARVQPGTTLDLAGLRARVTQAAPTASVDDHRAWIERMRSMTGATMFAG 180 S+D+LPVPR+IVAR PGT LDL GLR+RVTQ AP+ASVDDHRAWI+RMRSMTGAT+FAG Sbjct: 131 SLDDLPVPRMIVARAAPGTRLDLEGLRSRVTQLAPSASVDDHRAWIDRMRSMTGATVFAG 190 Query: 181 VGILILVIIATIISVSFATRGAMAANRPIVEVLHFVGAGDSFIANRFLRHFLRLGLEGGL 240 +G+L LVIIATIISVSFATRGAMAANRPIVEVLHFVGA D +IANRFLRHFLRLGL+GG+ Sbjct: 191 IGVLALVIIATIISVSFATRGAMAANRPIVEVLHFVGASDRYIANRFLRHFLRLGLKGGV 250 Query: 241 IGGGAAMLAFGFSESIANWFSGTPVGDQFAALLGTFSLRPSGYLVLAMQAVLIAAITAWA 300 IG AAML FGFSESIA+WFSGTPVGDQFAALLGTFSLRPSGYLVLA Q VLIAAITA+A Sbjct: 251 IGCVAAMLMFGFSESIASWFSGTPVGDQFAALLGTFSLRPSGYLVLAAQTVLIAAITAFA 310 Query: 301 SRRTLFATLDDID 313 SRRTLFATLDDID Sbjct: 311 SRRTLFATLDDID 323 >ref|NP_768031.1| cell division protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46656.1| cell division protein [Bradyrhizobium japonicum USDA 110] Length = 322 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 267/313 (85%), Positives = 292/313 (93%) Query: 1 LVDLGRERPQVPATARNMSPIVPRASISGRALVAVVAIMTFLASLTTGTVLLVSASAAEW 60 LVDLG+ERPQ+PA ARNMSPIVPRASI GRALVAVVAIMTFLAS+TTGTVLLVSASAAEW Sbjct: 10 LVDLGQERPQLPAKARNMSPIVPRASIHGRALVAVVAIMTFLASMTTGTVLLVSASAAEW 69 Query: 61 QSEVSSEITIQVRPSPGRDLDRDAQAAVEAMRAQPGILEVRPFSKEESAKLLEPWLGSGL 120 QS+V+SEITIQVRP GRDL+RD A EAMRAQ GI+EV+PF+K+ES KLLEPWLG+GL Sbjct: 70 QSDVASEITIQVRPQSGRDLERDTAAVTEAMRAQAGIVEVKPFTKDESGKLLEPWLGTGL 129 Query: 121 SIDELPVPRVIVARVQPGTTLDLAGLRARVTQAAPTASVDDHRAWIERMRSMTGATMFAG 180 S+D+LPVPR+I+ARVQPGT LDLA LRARVTQ AP+ASVDDHRAWIERMRSMT AT+ AG Sbjct: 130 SMDDLPVPRMIIARVQPGTALDLAALRARVTQVAPSASVDDHRAWIERMRSMTNATVLAG 189 Query: 181 VGILILVIIATIISVSFATRGAMAANRPIVEVLHFVGAGDSFIANRFLRHFLRLGLEGGL 240 +GIL LVIIATIISVSFATRGAMAANRPIVEVLHFVGAGD +IANRFLRHFLRLGLEGG+ Sbjct: 190 LGILALVIIATIISVSFATRGAMAANRPIVEVLHFVGAGDRYIANRFLRHFLRLGLEGGV 249 Query: 241 IGGGAAMLAFGFSESIANWFSGTPVGDQFAALLGTFSLRPSGYLVLAMQAVLIAAITAWA 300 IGGGAAML FGFSESIA WFSGTPVGDQFAALLGTFSLRPSGY+VLA+QAVLI AITA A Sbjct: 250 IGGGAAMLVFGFSESIAGWFSGTPVGDQFAALLGTFSLRPSGYVVLAVQAVLIGAITAVA 309 Query: 301 SRRTLFATLDDID 313 SR+TLFATL+D+D Sbjct: 310 SRQTLFATLNDVD 322 >ref|YP_317196.1| hypothetical protein Nwi_0577 [Nitrobacter winogradskyi Nb-255] gb|ABA03844.1| Protein of unknown function DUF214 [Nitrobacter winogradskyi Nb-255] Length = 314 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 257/313 (82%), Positives = 286/313 (91%) Query: 1 LVDLGRERPQVPATARNMSPIVPRASISGRALVAVVAIMTFLASLTTGTVLLVSASAAEW 60 L+DLGRERPQVP ARNMSPIVPRASI+GRALVAVVAIMTFLAS+TTG VLL++ASA+EW Sbjct: 2 LMDLGRERPQVPVRARNMSPIVPRASIAGRALVAVVAIMTFLASITTGAVLLINASASEW 61 Query: 61 QSEVSSEITIQVRPSPGRDLDRDAQAAVEAMRAQPGILEVRPFSKEESAKLLEPWLGSGL 120 QSEV+SEIT+QVRP+ GRDL++D AA A R QPGIL+VRP+++EESAKLLEPWLGSGL Sbjct: 62 QSEVASEITLQVRPAAGRDLEQDVAAAAAATREQPGILDVRPYTREESAKLLEPWLGSGL 121 Query: 121 SIDELPVPRVIVARVQPGTTLDLAGLRARVTQAAPTASVDDHRAWIERMRSMTGATMFAG 180 S+D+LPVPR+IVAR PGT LDL GLR+RVTQ AP+ SVDDHRAWI+RMRSMT AT+FAG Sbjct: 122 SLDDLPVPRMIVARAAPGTRLDLEGLRSRVTQLAPSTSVDDHRAWIDRMRSMTNATVFAG 181 Query: 181 VGILILVIIATIISVSFATRGAMAANRPIVEVLHFVGAGDSFIANRFLRHFLRLGLEGGL 240 +G+L LVIIATIISVSFATRGAMAANRPIVEVLHFVGA D +IAN FLRHFLRLGL GG+ Sbjct: 182 IGVLALVIIATIISVSFATRGAMAANRPIVEVLHFVGASDRYIANHFLRHFLRLGLRGGV 241 Query: 241 IGGGAAMLAFGFSESIANWFSGTPVGDQFAALLGTFSLRPSGYLVLAMQAVLIAAITAWA 300 IG AAML FGFSESIANWFSGTPVGDQFAALLGTFSLRPSGYLVLA Q +LIAAITA+A Sbjct: 242 IGCVAAMLMFGFSESIANWFSGTPVGDQFAALLGTFSLRPSGYLVLAGQTILIAAITAFA 301 Query: 301 SRRTLFATLDDID 313 SRRTLFATLD+ID Sbjct: 302 SRRTLFATLDEID 314 >ref|YP_001237330.1| cell division ABC transporter membrane component [Bradyrhizobium sp. BTAi1] gb|ABQ33424.1| Cell division ABC transporter (membrane component) [Bradyrhizobium sp. BTAi1] Length = 319 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 259/313 (82%), Positives = 286/313 (91%) Query: 1 LVDLGRERPQVPATARNMSPIVPRASISGRALVAVVAIMTFLASLTTGTVLLVSASAAEW 60 LVDLG +RPQ+PA AR +SPIVPRASI+GRALVAVVAIMTFLAS+TTG VLLVS SAAEW Sbjct: 7 LVDLGDDRPQLPAQARIVSPIVPRASIAGRALVAVVAIMTFLASITTGAVLLVSESAAEW 66 Query: 61 QSEVSSEITIQVRPSPGRDLDRDAQAAVEAMRAQPGILEVRPFSKEESAKLLEPWLGSGL 120 QSEV+SEIT+QVRP GRDL+RD EAMRAQ GI+EVRPF+K+ES+KLLEPWLGSGL Sbjct: 67 QSEVASEITVQVRPKTGRDLERDIALVTEAMRAQSGIVEVRPFTKDESSKLLEPWLGSGL 126 Query: 121 SIDELPVPRVIVARVQPGTTLDLAGLRARVTQAAPTASVDDHRAWIERMRSMTGATMFAG 180 S DELPVPRVI+ARVQPGT+ DLA LR RV+Q APTASVDDHRAWIERMRSMTGAT+FAG Sbjct: 127 SFDELPVPRVIIARVQPGTSFDLAALRNRVSQVAPTASVDDHRAWIERMRSMTGATLFAG 186 Query: 181 VGILILVIIATIISVSFATRGAMAANRPIVEVLHFVGAGDSFIANRFLRHFLRLGLEGGL 240 GIL+LVI+ATIISVSFATRGAMAANRPIVEVLHFVGAGD +IAN FLRHFL+LGLEGG+ Sbjct: 187 FGILVLVIVATIISVSFATRGAMAANRPIVEVLHFVGAGDRYIANHFLRHFLQLGLEGGV 246 Query: 241 IGGGAAMLAFGFSESIANWFSGTPVGDQFAALLGTFSLRPSGYLVLAMQAVLIAAITAWA 300 IGGG AML FGFSESIANWFSGTPVGDQFAALLGTFSLRP GY+V+A+QAV+IAA+T WA Sbjct: 247 IGGGLAMLGFGFSESIANWFSGTPVGDQFAALLGTFSLRPLGYVVIALQAVVIAAVTGWA 306 Query: 301 SRRTLFATLDDID 313 +RRTLFATL ID Sbjct: 307 ARRTLFATLASID 319 >ref|ZP_01044569.1| hypothetical protein NB311A_03544 [Nitrobacter sp. Nb-311A] gb|EAQ37350.1| hypothetical protein NB311A_03544 [Nitrobacter sp. Nb-311A] Length = 323 Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust. Identities = 256/313 (81%), Positives = 280/313 (89%) Query: 1 LVDLGRERPQVPATARNMSPIVPRASISGRALVAVVAIMTFLASLTTGTVLLVSASAAEW 60 L+DLGRERPQVP ARNMSPIVPRASI+GRALVAVVAIMTFLAS+TTG VLL+SASAAEW Sbjct: 11 LMDLGRERPQVPIRARNMSPIVPRASIAGRALVAVVAIMTFLASITTGGVLLISASAAEW 70 Query: 61 QSEVSSEITIQVRPSPGRDLDRDAQAAVEAMRAQPGILEVRPFSKEESAKLLEPWLGSGL 120 QSEVSSEITIQVRP GR+++ D A A+R PGIL+VRP++KEES KLLEPWLGSGL Sbjct: 71 QSEVSSEITIQVRPVAGRNIEHDVTAVAAAVREHPGILDVRPYTKEESGKLLEPWLGSGL 130 Query: 121 SIDELPVPRVIVARVQPGTTLDLAGLRARVTQAAPTASVDDHRAWIERMRSMTGATMFAG 180 +D+LPVPR+IVAR PGT LDL GLR+RVTQ AP+ SVDDHRAWI+RMRSMT AT+FAG Sbjct: 131 LLDDLPVPRMIVARAAPGTRLDLEGLRSRVTQLAPSTSVDDHRAWIDRMRSMTNATVFAG 190 Query: 181 VGILILVIIATIISVSFATRGAMAANRPIVEVLHFVGAGDSFIANRFLRHFLRLGLEGGL 240 +G+L LVI+ATIISVSFATRGAMAANRPIVEVLHFVGA D +IAN FLRHFLRLGL GG+ Sbjct: 191 IGVLALVIVATIISVSFATRGAMAANRPIVEVLHFVGASDRYIANHFLRHFLRLGLRGGV 250 Query: 241 IGGGAAMLAFGFSESIANWFSGTPVGDQFAALLGTFSLRPSGYLVLAMQAVLIAAITAWA 300 IG AAML FG SESIANWFSGTPVGDQFAALLGTFSLRPSGYLVLA Q VLIAAITAWA Sbjct: 251 IGCVAAMLMFGSSESIANWFSGTPVGDQFAALLGTFSLRPSGYLVLAGQTVLIAAITAWA 310 Query: 301 SRRTLFATLDDID 313 SRRTLFATLD+ID Sbjct: 311 SRRTLFATLDEID 323