BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0104.0089.p (877 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001237315.1| hypothetical protein BBta_1161 [Bradyrhizobi... 1197 0.0 ref|YP_568079.1| hypothetical protein RPD_0940 [Rhodopseudomonas... 1174 0.0 ref|ZP_08628497.1| methyl-accepting chemotaxis protein [Bradyrhi... 1161 0.0 ref|YP_576012.1| hypothetical protein Nham_0664 [Nitrobacter ham... 1158 0.0 ref|YP_484453.1| hypothetical protein RPB_0831 [Rhodopseudomonas... 1154 0.0 >ref|YP_001237315.1| hypothetical protein BBta_1161 [Bradyrhizobium sp. BTAi1] gb|ABQ33409.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 888 Score = 1197 bits (3098), Expect = 0.0, Method: Compositional matrix adjust. Identities = 639/898 (71%), Positives = 734/898 (81%), Gaps = 31/898 (3%) Query: 1 LSGANIEPSDPSRAVRD---SDAVARLKLTQQRLTEALQRARFAIGWERAWPHLARSLTI 57 +SG EP+ P+ + D +D +ARLKLTQ AL+RAR AI WER WPHLAR LT+ Sbjct: 1 MSGETPEPARPASSTPDGLANDGLARLKLTQ-----ALKRARLAIAWERGWPHLARLLTV 55 Query: 58 AGLFLVASWAGLWLVLPFVARVAGAGLFGIAALAALSPLVRFRWPSREEGLSRLDRGAGI 117 GLFL+ SWAGLWL LPF AR G LF + + A P++R+RWP+R+EGL+RLDRG+GI Sbjct: 56 IGLFLIVSWAGLWLGLPFAARAVGIVLFLLLLVGAALPMLRYRWPTRDEGLTRLDRGSGI 115 Query: 118 RHRPATTLSDTLTNKDPFALALWQAQRERTLASIKRIRAGLPRPRVSLHDPWALRALVIV 177 HRPAT LSDTL+++DP A ALWQAQRERTLAS+KRIRAG PRPR+SLHDPWA+RALVIV Sbjct: 116 AHRPATALSDTLSSRDPIAQALWQAQRERTLASVKRIRAGTPRPRLSLHDPWAVRALVIV 175 Query: 178 MLVASYVAAGDKRGLRVASAFDWNGIMAPANVRVDAWVTPPNYTGKPPIILSNANKDANA 237 +LVA+Y AAGD+R +R+ASAFDWNG+M P +RVDAW+ PP YT KPPIILS ANK+ Sbjct: 176 LLVATYFAAGDERRIRIASAFDWNGVMTPVTIRVDAWIKPPLYTAKPPIILSAANKEGAV 235 Query: 238 ADTTPLAVPAGSTLLVRSSGGSIDVVVGGGVTEVAPDG-----QAPKGTNERHFKITGDG 292 P+ VPAGSTL++RSSGG++DVV GGV E AP APKG ERHF I DG Sbjct: 236 PANGPIVVPAGSTLIIRSSGGNLDVVTSGGVAEAAPGEIAAGEAAPKGATERHFTIKADG 295 Query: 293 TAHVRAPAGQPQWKFTATPDRPPSIALTKDPERQARGALQMSYRLEDDYGVSEARAQFVA 352 TAHVRAP+GQPQW F ATPDRPP I++ KDPERQARG+L++SY+LEDDYGV+EARAQ VA Sbjct: 296 TAHVRAPSGQPQWVFAATPDRPPVISMAKDPERQARGSLKLSYKLEDDYGVTEARAQIVA 355 Query: 353 RPTDAPKEADSKK------DADGKSAQPRPLFEPPQFALVLPNARTRNGVGQTVKDLSED 406 RP ++ K AD K D+ +A RPLF+PP+F LVLPNARTRNGVGQTVKDLSED Sbjct: 356 RPAES-KPADGKASEGKAPDSTANAAAARPLFQPPEFPLVLPNARTRNGVGQTVKDLSED 414 Query: 407 PYAGADVTLTLTAKDEAGNEGKSEPFNMRLPERLFTKPLARALIEQRRILALDANQNGQV 466 PYAGADV +TLTAKDEAGNEGKSEPF +LPERLFTKPLARALIEQRR+LALDAN+N +V Sbjct: 415 PYAGADVAITLTAKDEAGNEGKSEPFETKLPERLFTKPLARALIEQRRVLALDANRNSEV 474 Query: 467 FAALEALMIAPEMFMPETGYYLGLHTVSRQLEAARTDDQLREVVASLWSLAVTIEDGNIS 526 F AL+AL IAPE+F PE G YLGL +V+RQLEAARTDD LREVVASLW+LAVTIEDGNIS Sbjct: 475 FTALDALAIAPELFTPEPGQYLGLRSVTRQLEAARTDDALREVVASLWALAVTIEDGNIS 534 Query: 527 DVDKALRAAQDALKQALERGATDEEIKKLTDNLRAALDNFLRQMVEQFRNNPQQLARPLD 586 DVDKALRAAQDALKQALERGA+DEEIKKL ++LR A+DN++RQ+ EQ RNNPQ RPLD Sbjct: 535 DVDKALRAAQDALKQALERGASDEEIKKLAEDLRRAMDNYMRQLAEQLRNNPQMAQRPLD 594 Query: 587 PNAKVLSQQDLKNMLDRMERLSRSGDKDAARQLLEQMQQMLENLQMAQPNQ-GDDDMQQS 645 N K+L QQDL+NM+DRMERLSR GDK+ AR+LLEQ+QQMLENLQMAQPNQ GD+DM+Q+ Sbjct: 595 QNTKMLRQQDLQNMIDRMERLSRQGDKEGARELLEQLQQMLENLQMAQPNQGGDNDMEQA 654 Query: 646 LNELGDMIRKQQQLRDKTFKQGQDSRRDRMR----GKQGEQSMGDLQQDQQALRDRLKKL 701 LNELGDMIRKQQQLRDKTFKQGQDSRRDR R +QSMGDLQQDQQALRDRLK+L Sbjct: 655 LNELGDMIRKQQQLRDKTFKQGQDSRRDRNRGKQQQGDQDQSMGDLQQDQQALRDRLKQL 714 Query: 702 QEELAKRGMGPDQRGQKGQKGQGQKGDQAQQGDQGGDQGDDGD--DGLDQADSAMGDASG 759 QE+LAKRGM Q+G+KGQKGQ + Q Q + GDQGD GD DGLD+AD AMGDA Sbjct: 715 QEQLAKRGM--GQKGEKGQKGQQGQKGQPGQQGEPGDQGDQGDAGDGLDEADGAMGDAGS 772 Query: 760 RLGEGNADGAVDSQGRALDALRKGAQSLADAMQQGDGDQPGDSPGNRAGRQQSGGNQTDP 819 +LG+ NADGAV+SQG+ALDALRKGAQSLADAMQQGDGDQPG G R GR + + TDP Sbjct: 773 QLGDNNADGAVESQGKALDALRKGAQSLADAMQQGDGDQPGQ--GARDGRGRQANSPTDP 830 Query: 820 LGRPLHGREFGDDYTVKIPGEIDVQRVRRILEELRRRLADPSRPQIELDYIERLLKDY 877 LGRPL DD++ KIPGEIDVQRVRRILEELRRRLADPSRPQ+ELDYIERLLKDY Sbjct: 831 LGRPLPNTRDIDDFSQKIPGEIDVQRVRRILEELRRRLADPSRPQVELDYIERLLKDY 888 >ref|YP_568079.1| hypothetical protein RPD_0940 [Rhodopseudomonas palustris BisB5] gb|ABE38178.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 851 Score = 1174 bits (3036), Expect = 0.0, Method: Compositional matrix adjust. Identities = 625/869 (71%), Positives = 725/869 (83%), Gaps = 25/869 (2%) Query: 10 DPSRAVRDSDAVARLKLTQQRLTEALQRARFAIGWERAWPHLARSLTIAGLFLVASWAGL 69 DPS+ RD DA+ARL+L AL+RA FAI WER+WP L R L++ GLFL ASWAGL Sbjct: 7 DPSQTPRDPDAMARLQLA-----TALRRATFAIAWERSWPLLVRLLSVVGLFLAASWAGL 61 Query: 70 WLVLPFVARVAGAGLFGIAALAALSPLVRFRWPSREEGLSRLDRGAGIRHRPATTLSDTL 129 WL LPFV RVAG LF A+ AL P+++FRWPSR++ L+RLDR G++HRPAT L+DTL Sbjct: 62 WLSLPFVGRVAGLALFAALAVVALLPVLKFRWPSRDDALARLDRATGLKHRPATALTDTL 121 Query: 130 TNKDPFALALWQAQRERTLASIKRIRAGLPRPRVSLHDPWALRALVIVMLVASYVAAGDK 189 + DP A ALWQAQRERTLA+IK + AGLP PR+ HDPWALRALV V+LVA+++AAG++ Sbjct: 122 ASSDPVAQALWQAQRERTLAAIKGVSAGLPAPRLPKHDPWALRALVAVLLVATFIAAGEE 181 Query: 190 RGLRVASAFDWNGIMAPANVRVDAWVTPPNYTGKPPIILSNANKDANAADTTPLAVPAGS 249 R RVA+AFDWNG +A NVRVDAWVTPP YT KPPI+LS AN+ +++ L VPAGS Sbjct: 182 RTARVAAAFDWNGALAAPNVRVDAWVTPPVYTNKPPIVLSAANRTLASSNEAALPVPAGS 241 Query: 250 TLLVRSSGGSIDVVVGGGVTEVAPDGQAPKGTNERHFKITGDGTAHVRAPAGQPQWKFTA 309 TLLVRSSGG +DV + GGV E P+G+APKG +ER +KITGDGTAHVRAP+GQPQW F A Sbjct: 242 TLLVRSSGGDLDVAISGGVVEALPEGEAPKGASERRYKITGDGTAHVRAPSGQPQWSFKA 301 Query: 310 TPDRPPSIALTKDPERQARGALQMSYRLEDDYGVSEARAQFVARPTDAPKEADSKKDADG 369 TPD PPSIAL K+PERQARG+LQ+SY+LEDDYGV+EA A F A P+ + +D+ Sbjct: 302 TPDHPPSIALAKEPERQARGSLQLSYKLEDDYGVTEAHALFAASPSATDQNSDT------ 355 Query: 370 KSAQPRPLFEPPQFALVLPNARTRNGVGQTVKDLSEDPYAGADVTLTLTAKDEAGNEGKS 429 PRPL+EPPQFAL LPNARTR GVGQTVKD+S+DPYAGA+VT+TLTAKDEAGNEG+S Sbjct: 356 ----PRPLYEPPQFALTLPNARTRAGVGQTVKDISDDPYAGAEVTVTLTAKDEAGNEGRS 411 Query: 430 EPFNMRLPERLFTKPLARALIEQRRILALDANQNGQVFAALEALMIAPEMFMPETGYYLG 489 EP MRLPERLFTKPLARALIEQRRILALDAN+N QV+AAL+ALMIAPE F PE G YLG Sbjct: 412 EPTTMRLPERLFTKPLARALIEQRRILALDANKNAQVYAALDALMIAPEAFTPEAGQYLG 471 Query: 490 LHTVSRQLEAARTDDQLREVVASLWSLAVTIEDGNISDVDKALRAAQDALKQALERGATD 549 L+TV+ QLE ARTDD LREVV +LWSLA++IEDGN SDV+KALRAAQDALKQALERGA+D Sbjct: 472 LYTVADQLERARTDDALREVVGNLWSLALSIEDGNTSDVEKALRAAQDALKQALERGASD 531 Query: 550 EEIKKLTDNLRAALDNFLRQMVEQFRNNPQQLARPLDPNAKVLSQQDLKNMLDRMERLSR 609 EEIKKLT+NLRAALDN++RQ+ EQ +NNPQQLARPLDPNA+V+ QQDL NM++RMERLSR Sbjct: 532 EEIKKLTENLRAALDNYMRQLAEQLKNNPQQLARPLDPNARVMRQQDLNNMIERMERLSR 591 Query: 610 SGDKDAARQLLEQMQQMLENLQMAQPNQGDD-DMQQSLNELGDMIRKQQQLRDKTFKQGQ 668 SGDK+AA+QLLEQ+ QMLENLQMAQP QG D DMQQ++NELGDMIRKQQQLRDKTFKQGQ Sbjct: 592 SGDKEAAKQLLEQLAQMLENLQMAQPGQGGDADMQQAMNELGDMIRKQQQLRDKTFKQGQ 651 Query: 669 DSRRDRMRGKQGEQSMGDLQQDQQALRDRLKKLQEELAKRGMGPDQRGQKGQKGQGQKGD 728 D RRDRMRG++GEQ++GDLQQDQQ L+DRL+KLQ+ELAKRG+G QRGQKG+ GQ + Sbjct: 652 DQRRDRMRGQKGEQNLGDLQQDQQNLQDRLRKLQQELAKRGLGQAQRGQKGEPGQQGEQG 711 Query: 729 QAQQGDQGGDQGDDGDDGLDQADSAMGDASGRLGEGNADGAVDSQGRALDALRKGAQSLA 788 + + + GLDQA+SAMGDA GRLGEGNAD AVDSQGRAL+ALRKGAQ LA Sbjct: 712 EQGEQSE---------GGLDQAESAMGDAEGRLGEGNADSAVDSQGRALEALRKGAQKLA 762 Query: 789 DAMQQGDGDQPGDSPGNRAGRQQSGGNQTDPLGRPLHGREFGDDYTVKIPGEIDVQRVRR 848 +AMQQGD G+ PGNR GRQQS GN TDPLGRPLHGREFGDD +VKIPGEIDVQRVRR Sbjct: 763 EAMQQGDQPGQGEGPGNRPGRQQSSGNDTDPLGRPLHGREFGDDLSVKIPGEIDVQRVRR 822 Query: 849 ILEELRRRLADPSRPQIELDYIERLLKDY 877 ILEELRRRL D +RPQ+ELDYIERLLKDY Sbjct: 823 ILEELRRRLGDSARPQLELDYIERLLKDY 851 >ref|ZP_08628497.1| methyl-accepting chemotaxis protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08821.1| methyl-accepting chemotaxis protein [Bradyrhizobiaceae bacterium SG-6C] Length = 853 Score = 1161 bits (3004), Expect = 0.0, Method: Compositional matrix adjust. Identities = 632/880 (71%), Positives = 718/880 (81%), Gaps = 30/880 (3%) Query: 1 LSGANIEPSDPSRAVRDSDAVARLKLTQQRLTEALQRARFAIGWERAWPHLARSLTIAGL 60 + G++ +PS+ R D+ + L +ALQRAR A+ WER WPH+AR LT+AGL Sbjct: 1 MIGSSPDPSERPRTAEDA--------RKAELAQALQRARLAVAWERGWPHIARILTVAGL 52 Query: 61 FLVASWAGLWLVLPFVARVAGAGLFGIAALAALSPLVRFRWPSREEGLSRLDRGAGIRHR 120 FL ASWAGLW+ P R+ + LFG+ A+AAL+P +RFRWP+RE+ L RLDRG GI HR Sbjct: 53 FLAASWAGLWITFPLTGRIIASVLFGLLAIAALAPAIRFRWPTREDALRRLDRGTGIAHR 112 Query: 121 PATTLSDTLTNKDPFALALWQAQRERTLASIKRIRAGLPRPRVSLHDPWALRALVIVMLV 180 PAT L+DTLT++DP ALWQ QR RTLASIKRIRAGLP PR++LHDPWALRALV+V++V Sbjct: 113 PATALTDTLTSEDPLTQALWQEQRARTLASIKRIRAGLPSPRLALHDPWALRALVVVLMV 172 Query: 181 ASYVAAGDKRGLRVASAFDWNGIMAPANVRVDAWVTPPNYTGKPPIILS-NANKDANAAD 239 A+YVAAG R RV +AFDW+G + ANVRVDAWVTPP YT +PPIILS +ANKDA +D Sbjct: 173 ATYVAAGSDRFARVVAAFDWDGAFSAANVRVDAWVTPPPYTSRPPIILSASANKDAPPSD 232 Query: 240 TTPLAVPAGSTLLVRSSGGSIDVVVGGGVTEVAPDGQAPKGTNERHFKITGDGTAHVRAP 299 P++VPAGSTL+VRSSGG +DV V GGVTEV G AP+GT+ERHF I GDG AHVRAP Sbjct: 233 AAPVSVPAGSTLIVRSSGGRLDVAVDGGVTEVPVTGNAPQGTSERHFTIAGDGAAHVRAP 292 Query: 300 AGQPQWKFTATPDRPPSIALTKDPERQARGALQMSYRLEDDYGVSEARAQFVARPTDAPK 359 +GQPQW F ATPDR PSI+L KDPERQA+GAL +SY+LEDDYGV+EA AQF R APK Sbjct: 293 SGQPQWTFHATPDRAPSISLAKDPERQAKGALLLSYKLEDDYGVTEAHAQFTPR---APK 349 Query: 360 EADSKKDADGKSAQPRPLFEPPQFALVLPNARTRNGVGQTVKDLSEDPYAGADVTLTLTA 419 AD SAQP+PLF+PP L LPNARTRNGVGQTVKDLSE+PYAGADVTLTLTA Sbjct: 350 -------ADDDSAQPQPLFDPPSITLGLPNARTRNGVGQTVKDLSENPYAGADVTLTLTA 402 Query: 420 KDEAGNEGKSEPFNMRLPERLFTKPLARALIEQRRILALDANQNGQVFAALEALMIAPEM 479 KDEAGNEG+SEPF MRLPERLF KPLARALIEQRR LALDANQ V ALEALMIAPE Sbjct: 403 KDEAGNEGRSEPFEMRLPERLFVKPLARALIEQRRNLALDANQKPLVLIALEALMIAPEA 462 Query: 480 FMPETGYYLGLHTVSRQLEAARTDDQLREVVASLWSLAVTIEDGNISDVDKALRAAQDAL 539 F+PE G+YLGL +VS QL A T D +R VV SLW+LAV IEDGNI+DV+KALRAAQDAL Sbjct: 463 FVPELGHYLGLRSVSGQLVRANTRDAMRGVVDSLWALAVAIEDGNITDVEKALRAAQDAL 522 Query: 540 KQALERGATDEEIKKLTDNLRAALDNFLRQMVEQFRNNPQQLARPLDPNAKVLSQQDLKN 599 K+ALERGA+DEEIKKLTDNLRAALDNF+RQ+ EQ RNNPQQLARPLDP+A+V+ QQDLKN Sbjct: 523 KEALERGASDEEIKKLTDNLRAALDNFMRQLAEQLRNNPQQLARPLDPSARVMRQQDLKN 582 Query: 600 MLDRMERLSRSGDKDAARQLLEQMQQMLENLQMAQPNQ-GDDDMQQSLNELGDMIRKQQQ 658 M+DRMERLSRSGDKDAAR LL+QMQQMLENLQMAQP Q GD DM+Q+LNELGDMIRKQQQ Sbjct: 583 MIDRMERLSRSGDKDAARALLDQMQQMLENLQMAQPGQGGDGDMEQALNELGDMIRKQQQ 642 Query: 659 LRDKTFKQGQDSRRDRMRGKQGEQS-MGDLQQDQQALRDRLKKLQEELAKRGMGPDQRGQ 717 LRDKTFKQGQDSRRDR RG+QG+QS M L+QDQQALRDRL KL +++ K GM P QRG Sbjct: 643 LRDKTFKQGQDSRRDRSRGEQGDQSQMDGLRQDQQALRDRLGKLLDDMKKNGMMPGQRGD 702 Query: 718 KGQKGQGQKGDQAQQGDQGGDQGDDGDDGLDQADSAMGDASGRLGEGNADGAVDSQGRAL 777 KGQ GQGQ+G Q Q G+ D L ADSAMGDA +LGEGNADGAV SQGRAL Sbjct: 703 KGQPGQGQRGQQGQGGED-------DGDSLGDADSAMGDAGNQLGEGNADGAVGSQGRAL 755 Query: 778 DALRKGAQSLADAMQQGDGDQPGDSPGNRAGRQQSGGNQTDPLGRPLHGREFGDDYTVKI 837 +ALRKGAQ+LA +MQQG+G D PGNRAGRQQ+ GN TDPLGRPL+GRE+ DD TVKI Sbjct: 756 EALRKGAQNLAQSMQQGEGQD--DGPGNRAGRQQNSGNTTDPLGRPLNGREWSDDLTVKI 813 Query: 838 PGEIDVQRVRRILEELRRRLADPSRPQIELDYIERLLKDY 877 PGEIDVQRVRRILEELRRRLADP+RPQIELDYIERLLKDY Sbjct: 814 PGEIDVQRVRRILEELRRRLADPNRPQIELDYIERLLKDY 853 >ref|YP_576012.1| hypothetical protein Nham_0664 [Nitrobacter hamburgensis X14] gb|ABE61552.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 844 Score = 1158 bits (2995), Expect = 0.0, Method: Compositional matrix adjust. Identities = 628/879 (71%), Positives = 721/879 (82%), Gaps = 37/879 (4%) Query: 1 LSGANIEPSDPSRAVRDSDAVARLKLTQQRLTEALQRARFAIGWERAWPHLARSLTIAGL 60 +SGA +PS R R + LT+AL+RAR+AI WER WPHLAR L++AGL Sbjct: 1 MSGATPDPSSQDRGRRAAAGPG--------LTQALRRARWAIAWERVWPHLARLLSVAGL 52 Query: 61 FLVASWAGLWLVLPFVARVAGAGLFGIAALAALSPLVRFRWPSREEGLSRLDRGAGIRHR 120 FL SWAGLWLVLP R F + ALA L PLV FRWPSREEGLSRLDR AG RHR Sbjct: 53 FLAVSWAGLWLVLPAAGRAVALAAFVLLALAVLLPLVWFRWPSREEGLSRLDRSAGTRHR 112 Query: 121 PATTLSDTLTNKDPFALALWQAQRERTLASIKRIRAGLPRPRVSLHDPWALRALVIVMLV 180 P T L+DTL +DP ALALWQAQR RTLASI+RIRAGLP PR+ +HD WALRALV+V++V Sbjct: 113 PVTALADTLATRDPVALALWQAQRARTLASIRRIRAGLPSPRLVMHDRWALRALVMVLMV 172 Query: 181 ASYVAAGDKRGLRVASAFDWNGIMAPANVRVDAWVTPPNYTGKPPIILSNANKDANAADT 240 A+++AAG +R RVA+AFDWNG++A ANVRVDAWV PP YTGKPPIILS NKDA ++DT Sbjct: 173 ATFIAAGGERTERVAAAFDWNGVLASANVRVDAWVAPPPYTGKPPIILSATNKDAASSDT 232 Query: 241 TPLAVPAGSTLLVRSSGGSIDVVVGGGVTEVAPDGQAPKGTNERHFKITGDGTAHVRAPA 300 L VPAGSTL+VRSSGG +DV VGGGVTE A + P+GTNERHF I DGTA VRAP+ Sbjct: 233 AALPVPAGSTLIVRSSGGRLDVAVGGGVTESASADKPPEGTNERHFTIATDGTARVRAPS 292 Query: 301 GQPQWKFTATPDRPPSIALTKDPERQARGALQMSYRLEDDYGVSEARAQFVARPTDAPKE 360 GQPQW F+A PDR P+I+L K PERQARG+LQ+SYR+EDDYGV+EA A F R A K Sbjct: 293 GQPQWTFSAVPDRAPAISLAKHPERQARGSLQLSYRMEDDYGVTEAHAVFSTRTESAAK- 351 Query: 361 ADSKKDADGKSAQPRPLFEPPQFALVLPNARTRNGVGQTVKDLSEDPYAGADVTLTLTAK 420 DG +A RPLF+ PQFALVLPNARTRNGVGQ VKDLSE PYAGADVTLTLTA+ Sbjct: 352 -------DGATA--RPLFDAPQFALVLPNARTRNGVGQIVKDLSESPYAGADVTLTLTAR 402 Query: 421 DEAGNEGKSEPFNMRLPERLFTKPLARALIEQRRILALDANQNGQVFAALEALMIAPEMF 480 D+AGNEG+SEPF+MRLPER+FTKPLARALIEQRRILALDANQN V+ AL+AL+IAPE+F Sbjct: 403 DDAGNEGRSEPFDMRLPERVFTKPLARALIEQRRILALDANQNAPVYTALDALLIAPEVF 462 Query: 481 MPETGYYLGLHTVSRQLEAARTDDQLREVVASLWSLAVTIEDGNISDVDKALRAAQDALK 540 P+ G YLGLH+V+RQLE ARTD QLREVVASLW+LAV+IEDGNI+DV+KALRAAQDALK Sbjct: 463 TPKVGEYLGLHSVTRQLEEARTDAQLREVVASLWALAVSIEDGNITDVEKALRAAQDALK 522 Query: 541 QALERGATDEEIKKLTDNLRAALDNFLRQMVEQFRNNPQQLARPLDPNAKVLSQQDLKNM 600 ALERGA+DEEIKKLT+NLRAALD +L+Q+ EQ RN+PQQLARPLD N KV+ QDL NM Sbjct: 523 DALERGASDEEIKKLTENLRAALDKYLQQLAEQMRNDPQQLARPLDRNTKVMRPQDLDNM 582 Query: 601 LDRMERLSRSGDKDAARQLLEQMQQMLENLQMAQPNQGDD-DMQQSLNELGDMIRKQQQL 659 ++RMERLSRSGDKDAARQLL+Q+QQMLENLQMAQP Q D DMQQSLNELGDMIRKQQQL Sbjct: 583 IERMERLSRSGDKDAARQLLDQLQQMLENLQMAQPGQSQDGDMQQSLNELGDMIRKQQQL 642 Query: 660 RDKTFKQGQDSRRDRMRGKQGEQSMGDLQQDQQALRDRLKKLQEELAKRGMGPDQRGQKG 719 RD+T+KQGQD RD R + G+++MGDLQQDQQAL DRL+ LQ+ELAKRGMGP QRG++G Sbjct: 643 RDRTYKQGQDLPRDHDRERDGQKAMGDLQQDQQALHDRLRTLQQELAKRGMGPSQRGRQG 702 Query: 720 QKGQGQKGDQAQQGDQGGDQGDDGDDGLDQADSAMGDASGRLGEGNADGAVDSQGRALDA 779 Q+ GQ +DG DGL QADSAMG+A GRLGEGNAD AVD+QGRAL+A Sbjct: 703 QEA-GQ---------------EDGGDGLGQADSAMGEADGRLGEGNADDAVDAQGRALEA 746 Query: 780 LRKGAQSLADAMQQGDGD-QPGDSPGNRAGRQQSGGNQTDPLGRPLHGREFGDDYTVKIP 838 LRKGA+SLA+AMQQ +GD Q D PG++AGR Q+GGNQTDPLGRPLHGREFG+D +V+IP Sbjct: 747 LRKGARSLAEAMQQSEGDGQAEDGPGSQAGR-QNGGNQTDPLGRPLHGREFGNDSSVRIP 805 Query: 839 GEIDVQRVRRILEELRRRLADPSRPQIELDYIERLLKDY 877 GEIDVQRVRRILEELRRRLADPSRP++ELDYIERLLKDY Sbjct: 806 GEIDVQRVRRILEELRRRLADPSRPKVELDYIERLLKDY 844 >ref|YP_484453.1| hypothetical protein RPB_0831 [Rhodopseudomonas palustris HaA2] gb|ABD05542.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2] Length = 846 Score = 1154 bits (2984), Expect = 0.0, Method: Compositional matrix adjust. Identities = 626/869 (72%), Positives = 705/869 (81%), Gaps = 30/869 (3%) Query: 10 DPSRAVRDSDAVARLKLTQQRLTEALQRARFAIGWERAWPHLARSLTIAGLFLVASWAGL 69 DPS+A RD DA ARL RL ALQRA AI WER+WP L R L++ GLFL ASWAGL Sbjct: 7 DPSQAPRDPDATARL-----RLATALQRATVAIAWERSWPLLVRLLSVVGLFLAASWAGL 61 Query: 70 WLVLPFVARVAGAGLFGIAALAALSPLVRFRWPSREEGLSRLDRGAGIRHRPATTLSDTL 129 WL LPF R+ G LF AL AL P+++FRWPSR+E L RLDR G++HRPAT L+DTL Sbjct: 62 WLALPFTGRIVGLVLFAALALVALYPVLKFRWPSRDEALVRLDRNTGLKHRPATALTDTL 121 Query: 130 TNKDPFALALWQAQRERTLASIKRIRAGLPRPRVSLHDPWALRALVIVMLVASYVAAGDK 189 + DP A ALW+AQRERTLA+++ IRAGLP PR+ HDPWALRALV V+LVA+++AAG++ Sbjct: 122 ASSDPVAQALWRAQRERTLAALQGIRAGLPAPRLPKHDPWALRALVAVLLVATFIAAGEE 181 Query: 190 RGLRVASAFDWNGIMAPANVRVDAWVTPPNYTGKPPIILSNANKDANAADTTPLAVPAGS 249 R RVA+AFDWNG +A NVRVDAWVTPP YT KPPIILS ANKD A + L VPAGS Sbjct: 182 RTARVAAAFDWNGALAAPNVRVDAWVTPPVYTNKPPIILSAANKDLAAQNQAALPVPAGS 241 Query: 250 TLLVRSSGGSIDVVVGGGVTEVAPDGQAPKGTNERHFKITGDGTAHVRAPAGQPQWKFTA 309 TLLVRSSGG++DV V GG+ E P+G+AP GT+ERHFKITGDGTAHVRAP+GQPQW F Sbjct: 242 TLLVRSSGGALDVAVTGGIVEAQPEGEAPAGTSERHFKITGDGTAHVRAPSGQPQWAFKV 301 Query: 310 TPDRPPSIALTKDPERQARGALQMSYRLEDDYGVSEARAQFVARPTDAPKEADSKKDADG 369 T D PSIAL K+PERQARG+LQ+SY+LEDDYGV+EA A P+ A + + Sbjct: 302 TTDHAPSIALAKEPERQARGSLQLSYKLEDDYGVTEAHALIAPSPSAAAQTTEP------ 355 Query: 370 KSAQPRPLFEPPQFALVLPNARTRNGVGQTVKDLSEDPYAGADVTLTLTAKDEAGNEGKS 429 PRPL+EPP FAL LPNARTR GVGQTVKDLSEDPYAGA+VTLTLTAKDEAGNEG+S Sbjct: 356 ----PRPLYEPPHFALTLPNARTRAGVGQTVKDLSEDPYAGAEVTLTLTAKDEAGNEGRS 411 Query: 430 EPFNMRLPERLFTKPLARALIEQRRILALDANQNGQVFAALEALMIAPEMFMPETGYYLG 489 EP MRLPERLFTKPLARALIEQRRILALDA +N QV+ AL+ALMIAPE F P+ G YLG Sbjct: 412 EPHKMRLPERLFTKPLARALIEQRRILALDATRNAQVYTALDALMIAPEAFTPDAGQYLG 471 Query: 490 LHTVSRQLEAARTDDQLREVVASLWSLAVTIEDGNISDVDKALRAAQDALKQALERGATD 549 L+TV+ QLE ARTDD LREVVASLWSLA+ IEDG+ SDV+KALRAAQDALKQALERGA+D Sbjct: 472 LYTVADQLERARTDDALREVVASLWSLALAIEDGDTSDVEKALRAAQDALKQALERGASD 531 Query: 550 EEIKKLTDNLRAALDNFLRQMVEQFRNNPQQLARPLDPNAKVLSQQDLKNMLDRMERLSR 609 EEIKKLT+NLRAALDNF+RQ+ EQ +NNPQQLARPLDPN +V+ QQDL NM++RMERLSR Sbjct: 532 EEIKKLTENLRAALDNFMRQLAEQMKNNPQQLARPLDPNTRVMRQQDLNNMIERMERLSR 591 Query: 610 SGDKDAARQLLEQMQQMLENLQMAQPNQ-GDDDMQQSLNELGDMIRKQQQLRDKTFKQGQ 668 SGDKDAARQLLEQ+ QMLENLQMAQP Q GDDDMQQS+NELGDMIRKQQQLRDKTFKQGQ Sbjct: 592 SGDKDAARQLLEQLAQMLENLQMAQPGQGGDDDMQQSMNELGDMIRKQQQLRDKTFKQGQ 651 Query: 669 DSRRDRMRGKQGEQSMGDLQQDQQALRDRLKKLQEELAKRGMGPDQRGQKGQKGQGQKGD 728 D RRDRMRG+ GEQS+GDLQQDQQ L++RL+KLQ+ELAKRGMG + + + Q Sbjct: 652 DQRRDRMRGQNGEQSLGDLQQDQQNLQERLRKLQQELAKRGMGQQGQRGQNGEQGQQGEQ 711 Query: 729 QAQQGDQGGDQGDDGDDGLDQADSAMGDASGRLGEGNADGAVDSQGRALDALRKGAQSLA 788 LDQA+SAMGDA GRLGEGNADGAVDSQGRALDALRKGAQ LA Sbjct: 712 GEGG--------------LDQAESAMGDAEGRLGEGNADGAVDSQGRALDALRKGAQKLA 757 Query: 789 DAMQQGDGDQPGDSPGNRAGRQQSGGNQTDPLGRPLHGREFGDDYTVKIPGEIDVQRVRR 848 +AMQQGDG GD PG+R GRQQS GN TDPLGRPL GREFGDD TVKIPGEIDVQRVRR Sbjct: 758 EAMQQGDGQGQGDGPGSRPGRQQSSGNNTDPLGRPLRGREFGDDLTVKIPGEIDVQRVRR 817 Query: 849 ILEELRRRLADPSRPQIELDYIERLLKDY 877 ILEELRRRL D +RPQ+ELDYIERLLKDY Sbjct: 818 ILEELRRRLGDSARPQLELDYIERLLKDY 846