BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0104.0088.p         (141 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_568078.1| carboxymuconolactone decarboxylase [Rhodopseudo...   219   8e-56
ref|YP_484452.1| carboxymuconolactone decarboxylase [Rhodopseudo...   219   1e-55
ref|NP_950074.1| putative 4-carboxymuconolactone decarboxylase [...   213   8e-54
ref|YP_004111190.1| carboxymuconolactone decarboxylase [Rhodopse...   211   3e-53
ref|YP_001994185.1| carboxymuconolactone decarboxylase [Rhodopse...   211   4e-53

>ref|YP_568078.1| carboxymuconolactone decarboxylase [Rhodopseudomonas palustris
           BisB5]
 gb|ABE38177.1| 4-carboxymuconolactone decarboxylase [Rhodopseudomonas palustris
           BisB5]
          Length = 126

 Score =  219 bits (559), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 102/117 (87%), Positives = 110/117 (94%)

Query: 1   MDQKTHDKGLEIRKAVLGEAYVNNALKNSDSFNKPFQELVTEYCWGAVWGREELPRKTRS 60
           MD+ THDKGL+IRKAVLGEAYV NALKNSD FNKPFQELVTEYCWGA+WGREELPRKTRS
Sbjct: 1   MDKTTHDKGLDIRKAVLGEAYVENALKNSDDFNKPFQELVTEYCWGAIWGREELPRKTRS 60

Query: 61  MLNLAMISILNRPHELKAHIKGALTNGVSRDEIREIFMQVSIYAGIPAGVDSXAKAR 117
           MLNLAMI+ILNRPHEL+AHIKGALTNGV++DEIREIFMQV+ YAGIPAGVDS   AR
Sbjct: 61  MLNLAMIAILNRPHELRAHIKGALTNGVTKDEIREIFMQVACYAGIPAGVDSFRIAR 117


>ref|YP_484452.1| carboxymuconolactone decarboxylase [Rhodopseudomonas palustris
           HaA2]
 gb|ABD05541.1| 4-carboxymuconolactone decarboxylase [Rhodopseudomonas palustris
           HaA2]
          Length = 126

 Score =  219 bits (557), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 101/117 (86%), Positives = 109/117 (93%)

Query: 1   MDQKTHDKGLEIRKAVLGEAYVNNALKNSDSFNKPFQELVTEYCWGAVWGREELPRKTRS 60
           MD+ THDKGLEIRKAVLGEAYV NALKN+D FNKPFQE+VTEYCWGA+WGREELPRKTRS
Sbjct: 1   MDKTTHDKGLEIRKAVLGEAYVENALKNADDFNKPFQEMVTEYCWGAIWGREELPRKTRS 60

Query: 61  MLNLAMISILNRPHELKAHIKGALTNGVSRDEIREIFMQVSIYAGIPAGVDSXAKAR 117
           MLNLAMI+ILNRPHEL+ HIKGALTNGVSRDEIREIFMQV+ YAG+PAGVDS   AR
Sbjct: 61  MLNLAMIAILNRPHELRVHIKGALTNGVSRDEIREIFMQVACYAGVPAGVDSFRLAR 117


>ref|NP_950074.1| putative 4-carboxymuconolactone decarboxylase [Rhodopseudomonas
           palustris CGA009]
 emb|CAE30180.1| putative 4-carboxymuconolactone decarboxylase [Rhodopseudomonas
           palustris CGA009]
          Length = 126

 Score =  213 bits (542), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 98/117 (83%), Positives = 109/117 (93%)

Query: 1   MDQKTHDKGLEIRKAVLGEAYVNNALKNSDSFNKPFQELVTEYCWGAVWGREELPRKTRS 60
           MD+ THDKGLEIRKAVLGEAYV NALKN+D FN+PFQELVTEYCWGA+WGR+ LP+KTRS
Sbjct: 1   MDKTTHDKGLEIRKAVLGEAYVENALKNADDFNQPFQELVTEYCWGAIWGRDGLPKKTRS 60

Query: 61  MLNLAMISILNRPHELKAHIKGALTNGVSRDEIREIFMQVSIYAGIPAGVDSXAKAR 117
           MLNLAMI+ILNRPHEL+AHIKGALTNGV++DEIREIFMQV+ YAGIPAGVDS   AR
Sbjct: 61  MLNLAMIAILNRPHELRAHIKGALTNGVTKDEIREIFMQVACYAGIPAGVDSFRIAR 117


>ref|YP_004111190.1| carboxymuconolactone decarboxylase [Rhodopseudomonas palustris
           DX-1]
 gb|ADU46457.1| Carboxymuconolactone decarboxylase [Rhodopseudomonas palustris
           DX-1]
          Length = 126

 Score =  211 bits (537), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 97/117 (82%), Positives = 108/117 (92%)

Query: 1   MDQKTHDKGLEIRKAVLGEAYVNNALKNSDSFNKPFQELVTEYCWGAVWGREELPRKTRS 60
           MD+ THDKGLEIRKAVLGEAYV NAL N+D FNKPFQELVTEYCWGA+WGR+ LP+KTRS
Sbjct: 1   MDKTTHDKGLEIRKAVLGEAYVENALNNADDFNKPFQELVTEYCWGAIWGRDGLPKKTRS 60

Query: 61  MLNLAMISILNRPHELKAHIKGALTNGVSRDEIREIFMQVSIYAGIPAGVDSXAKAR 117
           MLNLAMI+ILNRPHEL+AHIKGA+TNGV++DEIREIFMQV+ YAGIPAGVDS   AR
Sbjct: 61  MLNLAMIAILNRPHELRAHIKGAITNGVTKDEIREIFMQVACYAGIPAGVDSFRIAR 117


>ref|YP_001994185.1| carboxymuconolactone decarboxylase [Rhodopseudomonas palustris
           TIE-1]
 gb|ACF03710.1| Carboxymuconolactone decarboxylase [Rhodopseudomonas palustris
           TIE-1]
          Length = 126

 Score =  211 bits (536), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 97/117 (82%), Positives = 109/117 (93%)

Query: 1   MDQKTHDKGLEIRKAVLGEAYVNNALKNSDSFNKPFQELVTEYCWGAVWGREELPRKTRS 60
           MD+ THDKGLEIRKAVLGEAYV NALKN+D FN+PFQELVTEYCWGA+WGR+ LP+KTRS
Sbjct: 1   MDKTTHDKGLEIRKAVLGEAYVENALKNADDFNQPFQELVTEYCWGAIWGRDGLPKKTRS 60

Query: 61  MLNLAMISILNRPHELKAHIKGALTNGVSRDEIREIFMQVSIYAGIPAGVDSXAKAR 117
           ML+LAMI+ILNRPHEL+AHIKGALTNGV++DEIREIFMQV+ YAGIPAGVDS   AR
Sbjct: 61  MLHLAMIAILNRPHELRAHIKGALTNGVTKDEIREIFMQVACYAGIPAGVDSFRIAR 117