BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0104.0078.p (302 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_950082.1| 3-hydroxybutyryl-CoA dehydrogenase [Rhodopseudo... 551 e-155 ref|YP_534719.1| 3-hydroxybutyryl-CoA dehydrogenase [Rhodopseudo... 546 e-153 ref|YP_568071.1| 3-hydroxybutyryl-CoA dehydrogenase [Rhodopseudo... 540 e-152 ref|YP_004111199.1| 3-hydroxybutyryl-CoA dehydrogenase [Rhodopse... 538 e-151 ref|ZP_01045886.1| 3-hydroxybutyryl-CoA dehydrogenase [Nitrobact... 538 e-151 >ref|NP_950082.1| 3-hydroxybutyryl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] ref|YP_001994193.1| 3-hydroxybutyryl-CoA dehydrogenase [Rhodopseudomonas palustris TIE-1] emb|CAE30188.1| 3-hydroxybutyryl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] gb|ACF03718.1| 3-hydroxybutyryl-CoA dehydrogenase [Rhodopseudomonas palustris TIE-1] Length = 293 Score = 551 bits (1419), Expect = e-155, Method: Compositional matrix adjust. Identities = 261/293 (89%), Positives = 278/293 (94%) Query: 10 MTVAIKKVGVIGSGQMGNGIAHVAALAGFDVVLNDVSGDRLKSALATINGNLTRQVAKKA 69 M AIKKVGVIG+GQMGNGIAHVAAL GFDV+LNDVS DRLKSA+ATINGNL+RQ+AKK Sbjct: 1 MAAAIKKVGVIGAGQMGNGIAHVAALGGFDVILNDVSADRLKSAMATINGNLSRQIAKKL 60 Query: 70 ISETDRKQALDRITSAESLDALADCDLVIETAIEKEETKRKIFHEVCAVLKPEAIVATNS 129 ISE RKQAL RIT+ E LD L+DCDLVIETA+EKEETKRKIF+E+CAVLKPEAIVA+N+ Sbjct: 61 ISEDARKQALARITATEKLDGLSDCDLVIETAVEKEETKRKIFNELCAVLKPEAIVASNT 120 Query: 130 SSISITRLAASTDRPEKFIGIHFMNPVPAMELVELIRGIATDDMTFDTAKAFVAKLGKQV 189 SSISITRLAASTDRPE+FIGIHFMNPVP MELVELIRGIATDD TF+TAKAFV KLGKQ+ Sbjct: 121 SSISITRLAASTDRPERFIGIHFMNPVPVMELVELIRGIATDDATFETAKAFVTKLGKQI 180 Query: 190 AVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAIDAAMKLGAHHPMGPLELADFIGLD 249 AVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAID AMKLGAHHPMGPLELADFIGLD Sbjct: 181 AVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAIDMAMKLGAHHPMGPLELADFIGLD 240 Query: 250 TCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRKSQRGFYDYRGDKPIPTR 302 TCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRK+QRGFYDYRGDKP+PTR Sbjct: 241 TCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRKTQRGFYDYRGDKPVPTR 293 >ref|YP_534719.1| 3-hydroxybutyryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB18] gb|ABD90400.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas palustris BisB18] Length = 293 Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust. Identities = 260/293 (88%), Positives = 276/293 (94%) Query: 10 MTVAIKKVGVIGSGQMGNGIAHVAALAGFDVVLNDVSGDRLKSALATINGNLTRQVAKKA 69 M +AIKKVGVIGSGQMGNGIAHVAAL GFDVVLND++ DR KSA+ATINGNL+RQVAKK Sbjct: 1 MALAIKKVGVIGSGQMGNGIAHVAALGGFDVVLNDIAADRTKSAMATINGNLSRQVAKKI 60 Query: 70 ISETDRKQALDRITSAESLDALADCDLVIETAIEKEETKRKIFHEVCAVLKPEAIVATNS 129 I+E RKQAL RIT A+ LD LADCDLVIETA+EKEE KRKIFH++CAVLKPEAIVA+N+ Sbjct: 61 ITEEARKQALTRITGADRLDGLADCDLVIETAVEKEEVKRKIFHDLCAVLKPEAIVASNT 120 Query: 130 SSISITRLAASTDRPEKFIGIHFMNPVPAMELVELIRGIATDDMTFDTAKAFVAKLGKQV 189 SSISITRLAASTDRPE+FIGIHFMNPVP MELVELIRGIATDD TFD AKAFV KLGKQ+ Sbjct: 121 SSISITRLAASTDRPERFIGIHFMNPVPLMELVELIRGIATDDATFDAAKAFVTKLGKQI 180 Query: 190 AVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAIDAAMKLGAHHPMGPLELADFIGLD 249 AVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAIDAAMKLGAHHPMGPLELADFIGLD Sbjct: 181 AVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAIDAAMKLGAHHPMGPLELADFIGLD 240 Query: 250 TCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRKSQRGFYDYRGDKPIPTR 302 TCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRK+ RGFYDYRGDKP+PTR Sbjct: 241 TCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRKTSRGFYDYRGDKPVPTR 293 >ref|YP_568071.1| 3-hydroxybutyryl-CoA dehydrogenase [Rhodopseudomonas palustris BisB5] gb|ABE38170.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas palustris BisB5] Length = 312 Score = 540 bits (1392), Expect = e-152, Method: Compositional matrix adjust. Identities = 256/296 (86%), Positives = 277/296 (93%) Query: 7 DDKMTVAIKKVGVIGSGQMGNGIAHVAALAGFDVVLNDVSGDRLKSALATINGNLTRQVA 66 +D+M IKKVGVIGSGQMGNGIAHVAAL GF+VVLNDVS DRLKSA+ATINGNL+RQ++ Sbjct: 17 EDEMAAVIKKVGVIGSGQMGNGIAHVAALGGFEVVLNDVSADRLKSAMATINGNLSRQIS 76 Query: 67 KKAISETDRKQALDRITSAESLDALADCDLVIETAIEKEETKRKIFHEVCAVLKPEAIVA 126 KK ISE RK+AL IT+ E L+ LADCDLVIETA+EKEE KRKIF ++C+ LKPEAIVA Sbjct: 77 KKLISEDARKKALALITATEKLEGLADCDLVIETAVEKEEVKRKIFRDLCSTLKPEAIVA 136 Query: 127 TNSSSISITRLAASTDRPEKFIGIHFMNPVPAMELVELIRGIATDDMTFDTAKAFVAKLG 186 +N+SSISITRLAASTDRPE+FIGIHFMNPVP MELVELIRGIATDD TF+T+KAFV KLG Sbjct: 137 SNTSSISITRLAASTDRPERFIGIHFMNPVPVMELVELIRGIATDDATFETSKAFVTKLG 196 Query: 187 KQVAVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAIDAAMKLGAHHPMGPLELADFI 246 KQ+AVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAIDAAMKLGAHHPMGPLELADFI Sbjct: 197 KQIAVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAIDAAMKLGAHHPMGPLELADFI 256 Query: 247 GLDTCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRKSQRGFYDYRGDKPIPTR 302 GLDTCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRK+QRGFYDYRGDKPIPTR Sbjct: 257 GLDTCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRKTQRGFYDYRGDKPIPTR 312 >ref|YP_004111199.1| 3-hydroxybutyryl-CoA dehydrogenase [Rhodopseudomonas palustris DX-1] gb|ADU46466.1| 3-hydroxybutyryl-CoA dehydrogenase [Rhodopseudomonas palustris DX-1] Length = 293 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 255/293 (87%), Positives = 274/293 (93%) Query: 10 MTVAIKKVGVIGSGQMGNGIAHVAALAGFDVVLNDVSGDRLKSALATINGNLTRQVAKKA 69 M AIKKVGVIG+GQMGNGIAHV AL G DVVLND+S DRLKSA+ATINGNL+RQ+AKK Sbjct: 1 MAAAIKKVGVIGAGQMGNGIAHVIALGGIDVVLNDLSADRLKSAMATINGNLSRQIAKKI 60 Query: 70 ISETDRKQALDRITSAESLDALADCDLVIETAIEKEETKRKIFHEVCAVLKPEAIVATNS 129 I+E RK AL RIT+ E LD L+DCDLVIETA+EKEETKRKIF+E+CA LKPEAI+A+N+ Sbjct: 61 ITEDARKAALARITATEKLDGLSDCDLVIETAVEKEETKRKIFNELCASLKPEAIIASNT 120 Query: 130 SSISITRLAASTDRPEKFIGIHFMNPVPAMELVELIRGIATDDMTFDTAKAFVAKLGKQV 189 SSISITRLAASTDRPE+FIGIHFMNPVP MELVELIRGIATDD TF+TAKAFV KLGKQ+ Sbjct: 121 SSISITRLAASTDRPERFIGIHFMNPVPVMELVELIRGIATDDATFETAKAFVTKLGKQI 180 Query: 190 AVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAIDAAMKLGAHHPMGPLELADFIGLD 249 AVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAID AMKLGAHHPMGPLELADFIGLD Sbjct: 181 AVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAIDMAMKLGAHHPMGPLELADFIGLD 240 Query: 250 TCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRKSQRGFYDYRGDKPIPTR 302 TCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRK+QRGFYDYRGDKP+PTR Sbjct: 241 TCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRKTQRGFYDYRGDKPVPTR 293 >ref|ZP_01045886.1| 3-hydroxybutyryl-CoA dehydrogenase [Nitrobacter sp. Nb-311A] gb|EAQ36257.1| 3-hydroxybutyryl-CoA dehydrogenase [Nitrobacter sp. Nb-311A] Length = 293 Score = 538 bits (1386), Expect = e-151, Method: Compositional matrix adjust. Identities = 255/293 (87%), Positives = 273/293 (93%) Query: 10 MTVAIKKVGVIGSGQMGNGIAHVAALAGFDVVLNDVSGDRLKSALATINGNLTRQVAKKA 69 M I+KVGVIGSGQMGNGIAHVAALAGFDVVLND+S D+L +A+ATIN NL+RQVAKK Sbjct: 1 MAAMIRKVGVIGSGQMGNGIAHVAALAGFDVVLNDISADQLNAAMATINANLSRQVAKKI 60 Query: 70 ISETDRKQALDRITSAESLDALADCDLVIETAIEKEETKRKIFHEVCAVLKPEAIVATNS 129 I+E DR +AL RI+ ESLD LADCDLVIETA+EKE+ KRKIFH +CAVLKPEAIVA+N+ Sbjct: 61 ITEDDRGKALARISQTESLDVLADCDLVIETAVEKEDVKRKIFHNLCAVLKPEAIVASNT 120 Query: 130 SSISITRLAASTDRPEKFIGIHFMNPVPAMELVELIRGIATDDMTFDTAKAFVAKLGKQV 189 SSISITRLAASTDRPEKFIGIHFMNPVP MELVELIRGIAT D TFD AK FVA+LGKQ+ Sbjct: 121 SSISITRLAASTDRPEKFIGIHFMNPVPLMELVELIRGIATGDATFDAAKEFVARLGKQI 180 Query: 190 AVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAIDAAMKLGAHHPMGPLELADFIGLD 249 AVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAIDAAM+LGAHHPMGPLELADFIGLD Sbjct: 181 AVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAIDAAMRLGAHHPMGPLELADFIGLD 240 Query: 250 TCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRKSQRGFYDYRGDKPIPTR 302 TCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRKSQRGFYDYRGDKP+PTR Sbjct: 241 TCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRKSQRGFYDYRGDKPVPTR 293