BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0104.0060.p         (70 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_571651.1| hypothetical protein Nham_4196 [Nitrobacter ham...    71   5e-11
ref|YP_002290451.1| hypothetical protein OCAR_7483 [Oligotropha ...    67   9e-10
ref|YP_001240223.1| hypothetical protein BBta_4265 [Bradyrhizobi...    67   1e-09
ref|ZP_01047620.1| hypothetical protein NB311A_17701 [Nitrobacte...    56   2e-06
ref|YP_782577.1| hypothetical protein RPE_3667 [Rhodopseudomonas...    55   3e-06

>ref|YP_571651.1| hypothetical protein Nham_4196 [Nitrobacter hamburgensis X14]
 gb|ABE64819.1| hypothetical protein Nham_4196 [Nitrobacter hamburgensis X14]
          Length = 71

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/62 (64%), Positives = 49/62 (79%)

Query: 1  MGLAQYAVIAAGEEWGVLHDGNLNGGYATKEAAFESAVAAAALAIRMGHEVHVSVPGREE 60
          MGLAQYAV+  G+ W +L+DG+    YATKEAAFE+AVA A+LAIR GHE+H+SVPGR  
Sbjct: 1  MGLAQYAVVVRGQGWTILYDGDATNDYATKEAAFEAAVATASLAIREGHEIHISVPGRSA 60

Query: 61 GE 62
          G 
Sbjct: 61 GN 62


>ref|YP_002290451.1| hypothetical protein OCAR_7483 [Oligotropha carboxidovorans OM5]
 ref|YP_004631615.1| hypothetical protein OCA5_c06510 [Oligotropha carboxidovorans
          OM5]
 gb|ACI94586.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
 gb|AEI01799.1| hypothetical protein OCA4_c06500 [Oligotropha carboxidovorans
          OM4]
 gb|AEI05374.1| hypothetical protein OCA5_c06510 [Oligotropha carboxidovorans
          OM5]
          Length = 64

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/57 (73%), Positives = 46/57 (80%)

Query: 1  MGLAQYAVIAAGEEWGVLHDGNLNGGYATKEAAFESAVAAAALAIRMGHEVHVSVPG 57
          MGLA YAV     +WG+LHDGN+ G Y TKEAAFESAVAAA+LAIR GHEVHVS PG
Sbjct: 1  MGLANYAVTQVDNKWGILHDGNIEGDYETKEAAFESAVAAASLAIREGHEVHVSAPG 57


>ref|YP_001240223.1| hypothetical protein BBta_4265 [Bradyrhizobium sp. BTAi1]
 gb|ABQ36317.1| hypothetical protein BBta_4265 [Bradyrhizobium sp. BTAi1]
          Length = 65

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/59 (69%), Positives = 50/59 (84%)

Query: 1  MGLAQYAVIAAGEEWGVLHDGNLNGGYATKEAAFESAVAAAALAIRMGHEVHVSVPGRE 59
          MGLAQYAV+A G+ W VLHDGN +G +AT+EAAFESA AAA LA++ GHEVH+SVPG +
Sbjct: 1  MGLAQYAVVAVGDHWSVLHDGNTHGDFATREAAFESAAAAATLALKQGHEVHLSVPGND 59


>ref|ZP_01047620.1| hypothetical protein NB311A_17701 [Nitrobacter sp. Nb-311A]
 gb|EAQ34380.1| hypothetical protein NB311A_17701 [Nitrobacter sp. Nb-311A]
          Length = 66

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 41/57 (71%)

Query: 1  MGLAQYAVIAAGEEWGVLHDGNLNGGYATKEAAFESAVAAAALAIRMGHEVHVSVPG 57
          MGLA Y V   G  W VLHDG  +  YATKEAAFE+AV AA++AIR G EVH+SV G
Sbjct: 6  MGLASYEVFEKGRSWIVLHDGKADHEYATKEAAFEAAVGAASVAIREGDEVHISVTG 62


>ref|YP_782577.1| hypothetical protein RPE_3667 [Rhodopseudomonas palustris BisA53]
 gb|ABJ07597.1| hypothetical protein RPE_3667 [Rhodopseudomonas palustris BisA53]
          Length = 70

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 47/65 (72%)

Query: 1  MGLAQYAVIAAGEEWGVLHDGNLNGGYATKEAAFESAVAAAALAIRMGHEVHVSVPGREE 60
          MG A Y ++   ++W V+HDG   GGYA+KEAAFE+A AAA+ AI+ GHEV V+VPG+  
Sbjct: 1  MGRAYYDIVGQDQQWSVVHDGATEGGYASKEAAFEAACAAASNAIKFGHEVRVTVPGQSA 60

Query: 61 GEAAL 65
            +AL
Sbjct: 61 ESSAL 65