BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0104.0057.p (162 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770491.1| transcriptional regulator [Bradyrhizobium japon... 260 5e-68 ref|YP_001206615.1| MarR family transcriptional regulator [Brady... 178 2e-43 ref|YP_001523991.1| transcriptional regulator [Azorhizobium caul... 135 3e-30 ref|ZP_08868145.1| MarR family transcriptional regulator [Azospi... 130 9e-29 ref|YP_001631215.1| MarR family transcriptional regulator [Borde... 127 4e-28 >ref|NP_770491.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC49116.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 167 Score = 260 bits (664), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 133/162 (82%), Positives = 142/162 (87%), Gaps = 1/162 (0%) Query: 1 MPPSQSHIHAEIGRLVTRLARIWRRESDQALSDHGLSYATAIPLLVLSRQGETVRQGVLA 60 M PSQ IHAEIGRL+TRL R+WRRESDQALSDHGLSYATAIPLL+LS QGE VRQGVLA Sbjct: 7 MAPSQGFIHAEIGRLITRLGRMWRRESDQALSDHGLSYATAIPLLLLSHQGENVRQGVLA 66 Query: 61 DELGIEGPSLVRLIDLLQSEGFVERREDPTDRRAKTLHLTATGEAKVEEINRVLRRVRAS 120 DELGIEGPSLVRLIDLLQ+EG VERREDPTDRRAKTLHLT GEAKVEE NRVLRRVRAS Sbjct: 67 DELGIEGPSLVRLIDLLQAEGLVERREDPTDRRAKTLHLTKAGEAKVEETNRVLRRVRAS 126 Query: 121 LLKDIGSAELAVTFETLQLIEQRASRLQGARTTPAKTVPEAK 162 LLKDIG+ ELA+TFETLQ IEQRA RL A+ A+T E+K Sbjct: 127 LLKDIGADELAITFETLQRIEQRAGRLHEAKMF-ARTFAESK 167 >ref|YP_001206615.1| MarR family transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL78398.1| putative transcriptional regulatory protein slyA-like, MarR family [Bradyrhizobium sp. ORS 278] Length = 161 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 96/154 (62%), Positives = 114/154 (74%), Gaps = 4/154 (2%) Query: 1 MPPSQSHIHAEIGRLVTRLARIWRRESDQALSDHGLSYATAIPLLVLSRQGET----VRQ 56 M + +EIG L+ R+AR+WRR +DQAL+DHGLS ATA PL L+R+G +RQ Sbjct: 1 MMSDPAKTQSEIGLLIARVARLWRRAADQALADHGLSQATAHPLRALARRGRNASSGIRQ 60 Query: 57 GVLADELGIEGPSLVRLIDLLQSEGFVERREDPTDRRAKTLHLTATGEAKVEEINRVLRR 116 G LA+E+GIEGPSLVRLIDLLQ+E VERREDPTDRRAKTLHLTA GEAK +EI VLRR Sbjct: 61 GALAEEVGIEGPSLVRLIDLLQTENLVERREDPTDRRAKTLHLTARGEAKADEIEAVLRR 120 Query: 117 VRASLLKDIGSAELAVTFETLQLIEQRASRLQGA 150 VR LLKDI +LA+ + L IEQR RL+ A Sbjct: 121 VRGFLLKDISPEDLAIASDVLHRIEQRMLRLREA 154 >ref|YP_001523991.1| transcriptional regulator [Azorhizobium caulinodans ORS 571] dbj|BAF87073.1| transcriptional regulator [Azorhizobium caulinodans ORS 571] Length = 168 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 75/146 (51%), Positives = 96/146 (65%), Gaps = 6/146 (4%) Query: 1 MPPSQSHIHAEIGRLVTRLARIWRRESDQALSDHGLSYATAIPLLVLSRQGETVRQGVLA 60 +PP+ + GRLV ++ R+WRRE D AL HGLS ATA+PLL+L +GE +RQ LA Sbjct: 15 LPPA-----TQFGRLVIQVHRLWRRELDHALVGHGLSLATALPLLMLRERGE-LRQNALA 68 Query: 61 DELGIEGPSLVRLIDLLQSEGFVERREDPTDRRAKTLHLTATGEAKVEEINRVLRRVRAS 120 + LGIE PSLVRL+D L +EG VERREDP DRRAK LHLT G+ + + L +RA Sbjct: 69 EALGIECPSLVRLLDALAAEGLVERREDPADRRAKVLHLTPLGQRRAQAAEDALVVMRAR 128 Query: 121 LLKDIGSAELAVTFETLQLIEQRASR 146 LL D+ +LA T L+ +E R R Sbjct: 129 LLADVSEEDLARTLHVLRTVEGRLDR 154 >ref|ZP_08868145.1| MarR family transcriptional regulator [Azospirillum amazonense Y2] gb|EGY02261.1| MarR family transcriptional regulator [Azospirillum amazonense Y2] Length = 163 Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 68/151 (45%), Positives = 92/151 (60%) Query: 9 HAEIGRLVTRLARIWRRESDQALSDHGLSYATAIPLLVLSRQGETVRQGVLADELGIEGP 68 H G + LAR WRRE+D AL +G S ATA+PL+VL+R G+ +RQG LAD +G+EGP Sbjct: 13 HRAFGLTLCYLARCWRREADAALKAYGQSEATALPLVVLARLGDGIRQGQLADHVGVEGP 72 Query: 69 SLVRLIDLLQSEGFVERREDPTDRRAKTLHLTATGEAKVEEINRVLRRVRASLLKDIGSA 128 SLVRL+D+L+ +G +ERR DP DRR KTLHLTA G A ++ L +R LL ++ Sbjct: 73 SLVRLVDMLERDGLLERRNDPRDRRVKTLHLTAEGRALAVRLDDALDGMRQRLLAEVTPE 132 Query: 129 ELAVTFETLQLIEQRASRLQGARTTPAKTVP 159 +L +E+ R GA+ P Sbjct: 133 QLDTALTVFAAVERALGRSPGAKDGTEGDAP 163 >ref|YP_001631215.1| MarR family transcriptional regulator [Bordetella petrii DSM 12804] emb|CAP42947.1| putative MarR-family transcriptional regulator [Bordetella petrii] Length = 158 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 73/149 (48%), Positives = 97/149 (65%), Gaps = 4/149 (2%) Query: 2 PPSQSHIHAEIGRLVTRLARIWRRESDQALSDHGLSYATAIPLLVLSRQGETVRQGVLAD 61 PPS S + A L+ L+R +R +D ALS++GLS ATA P+++ R G+ VRQG LA+ Sbjct: 3 PPSDSRLMAATASLMV-LSRAYRGAADAALSEYGLSQATAWPVIIAGRLGDGVRQGALAE 61 Query: 62 ELGIEGPSLVRLIDLLQSEGFVERREDPTDRRAKTLHLTATGEAKVEEINRVLRRVRASL 121 LG+EGPSLVR+ID L S G +ERREDP DRRA+TLHLT G+A E + VL +R L Sbjct: 62 ALGVEGPSLVRVIDHLVSAGLMERREDPHDRRARTLHLTPDGQALRERVECVLAALRRQL 121 Query: 122 LKDIGSAELAVT---FETLQLIEQRASRL 147 K++ A+L F+TL+ R S L Sbjct: 122 FKNVSDADLEACLRVFDTLKTTLGRRSAL 150