BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0104.0055.p         (123 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002977702.1| major facilitator superfamily MFS_1 [Rhizobi...   162   2e-38
ref|YP_769959.1| transmembrane permease protein [Rhizobium legum...   162   2e-38
ref|YP_002283124.1| major facilitator superfamily protein [Rhizo...   158   2e-37
ref|YP_001207717.1| major facilitator superfamily oxalate/format...   155   3e-36
ref|YP_001242168.1| major facilitator superfamily permease [Brad...   154   4e-36

>ref|YP_002977702.1| major facilitator superfamily MFS_1 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gb|ACS58163.1| major facilitator superfamily MFS_1 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 552

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 80/88 (90%), Positives = 82/88 (93%)

Query: 1   VIGMASPMLQEIFAGKLIGLPNVGFNQLDAGQKAQIAAIAAGFAGLLSLFNIGGRFFWAS 60
           VIGMASPMLQEIFAG LIGLP+VGF QLDAGQKA IA IAAGFAGLLSLFNIGGRFFWAS
Sbjct: 293 VIGMASPMLQEIFAGSLIGLPDVGFAQLDAGQKASIATIAAGFAGLLSLFNIGGRFFWAS 352

Query: 61  LSDKIGRKNTYYTFFILGIALYALAPTF 88
           LSDKIGRKNTYY FF+LGI LYALAPTF
Sbjct: 353 LSDKIGRKNTYYCFFVLGIVLYALAPTF 380


>ref|YP_769959.1| transmembrane permease protein [Rhizobium leguminosarum bv. viciae
           3841]
 emb|CAK09875.1| putative transmembrane permease protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 552

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 80/88 (90%), Positives = 82/88 (93%)

Query: 1   VIGMASPMLQEIFAGKLIGLPNVGFNQLDAGQKAQIAAIAAGFAGLLSLFNIGGRFFWAS 60
           VIGMASPMLQEIFAG LIGLP+VGF QLDAGQKA IA IAAGFAGLLSLFNIGGRFFWAS
Sbjct: 293 VIGMASPMLQEIFAGSLIGLPDVGFAQLDAGQKASIATIAAGFAGLLSLFNIGGRFFWAS 352

Query: 61  LSDKIGRKNTYYTFFILGIALYALAPTF 88
           LSDKIGRKNTYY FF+LGI LYALAPTF
Sbjct: 353 LSDKIGRKNTYYCFFVLGIVLYALAPTF 380


>ref|YP_002283124.1| major facilitator superfamily protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gb|ACI56898.1| major facilitator superfamily MFS_1 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 552

 Score =  158 bits (400), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/88 (88%), Positives = 82/88 (93%)

Query: 1   VIGMASPMLQEIFAGKLIGLPNVGFNQLDAGQKAQIAAIAAGFAGLLSLFNIGGRFFWAS 60
           V+GMASPMLQEIFAG LIGLP+VGF QLDAGQKA IA IAAGFAGLLSLFNIGGRFFWAS
Sbjct: 293 VLGMASPMLQEIFAGSLIGLPDVGFAQLDAGQKASIATIAAGFAGLLSLFNIGGRFFWAS 352

Query: 61  LSDKIGRKNTYYTFFILGIALYALAPTF 88
           LSDKIGRKNTYY FFI+GIALYALAP+ 
Sbjct: 353 LSDKIGRKNTYYCFFIIGIALYALAPSL 380


>ref|YP_001207717.1| major facilitator superfamily oxalate/formate antiporter permease
           [Bradyrhizobium sp. ORS 278]
 emb|CAL79500.1| putative permease of the Major Facilitator Superfamily (MFS);
           putative oxalate/formate antiporter [Bradyrhizobium sp.
           ORS 278]
          Length = 551

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 76/88 (86%), Positives = 80/88 (90%)

Query: 1   VIGMASPMLQEIFAGKLIGLPNVGFNQLDAGQKAQIAAIAAGFAGLLSLFNIGGRFFWAS 60
           VIGMASPMLQEIFAGKLIGLP+V FNQLDA QKA +A IAAGFAGLLSLFNIGGRFFWAS
Sbjct: 293 VIGMASPMLQEIFAGKLIGLPDVSFNQLDATQKATVAGIAAGFAGLLSLFNIGGRFFWAS 352

Query: 61  LSDKIGRKNTYYTFFILGIALYALAPTF 88
           LSD IGRK TYY FF++GI LYALAPTF
Sbjct: 353 LSDHIGRKATYYCFFLIGIVLYALAPTF 380


>ref|YP_001242168.1| major facilitator superfamily permease [Bradyrhizobium sp. BTAi1]
 gb|ABQ38262.1| putative permease of the Major Facilitator Superfamily (MFS)
           [Bradyrhizobium sp. BTAi1]
          Length = 551

 Score =  154 bits (390), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 75/88 (85%), Positives = 80/88 (90%)

Query: 1   VIGMASPMLQEIFAGKLIGLPNVGFNQLDAGQKAQIAAIAAGFAGLLSLFNIGGRFFWAS 60
           VIGMASPMLQEIFAGKLIGLP+V FNQLDA QKA +A IAAGFAGLLSLFNIGGRFFWAS
Sbjct: 293 VIGMASPMLQEIFAGKLIGLPDVSFNQLDAAQKATVAGIAAGFAGLLSLFNIGGRFFWAS 352

Query: 61  LSDKIGRKNTYYTFFILGIALYALAPTF 88
           +SD IGRK TYY FF++GI LYALAPTF
Sbjct: 353 MSDHIGRKATYYCFFLIGIVLYALAPTF 380