BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0104.0051.p         (68 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770493.1| hypothetical protein bsr3853 [Bradyrhizobium ja...   107   6e-22
ref|YP_001206617.1| hypothetical protein BRADO4670 [Bradyrhizobi...    79   3e-13
ref|YP_004013064.1| hypothetical protein Rvan_2754 [Rhodomicrobi...    77   9e-13
ref|YP_004681652.1| hypothetical protein CNE_2c14570 [Cupriavidu...    75   5e-12
ref|YP_001755083.1| hypothetical protein Mrad2831_2405 [Methylob...    74   5e-12

>ref|NP_770493.1| hypothetical protein bsr3853 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49118.1| bsr3854 [Bradyrhizobium japonicum USDA 110]
          Length = 68

 Score =  107 bits (267), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 62/68 (91%)

Query: 1  MRYELDIYGVLVPALLLWLIVAYALSAVVSRVMQRFGFYRLVWHRALFNFALYVCLLGVV 60
          MRY +DIYGVLVP+LLLW+IVAY LSA++ R+MQRF  YRLVWHRALF+F+++VCLLGVV
Sbjct: 1  MRYVIDIYGVLVPSLLLWIIVAYVLSAILRRLMQRFDLYRLVWHRALFDFSIFVCLLGVV 60

Query: 61 VYLSEFLP 68
          VYLSE+L 
Sbjct: 61 VYLSEYLS 68


>ref|YP_001206617.1| hypothetical protein BRADO4670 [Bradyrhizobium sp. ORS 278]
 emb|CAL78400.1| conserved hypothetical protein; putative membrane protein
          [Bradyrhizobium sp. ORS 278]
          Length = 69

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/65 (63%), Positives = 55/65 (84%)

Query: 1  MRYELDIYGVLVPALLLWLIVAYALSAVVSRVMQRFGFYRLVWHRALFNFALYVCLLGVV 60
          MR+++DI GVLVP+LLLWL+VAYA  A++  +++R G YRLVWH ALF+FALYVC+LG +
Sbjct: 1  MRHDIDIAGVLVPSLLLWLVVAYACVALLRALLRRLGVYRLVWHPALFDFALYVCVLGGI 60

Query: 61 VYLSE 65
          VYL+ 
Sbjct: 61 VYLAS 65


>ref|YP_004013064.1| hypothetical protein Rvan_2754 [Rhodomicrobium vannielii ATCC
          17100]
 gb|ADP71965.1| protein of unknown function DUF1656 [Rhodomicrobium vannielii
          ATCC 17100]
          Length = 71

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 1/66 (1%)

Query: 4  ELDIYGVLVPALLLWLIVAYALSAVVSRVMQRFGFYRLVWHRALFNFALYVCLLGVVVYL 63
          ELDIYGV VPALLLW+++AYA++A++  + QR G YR  WHRALF+ +LY  +LG VV L
Sbjct: 4  ELDIYGVFVPALLLWMLIAYAVTAMLRSLCQRLGLYRYAWHRALFDISLYFIVLGAVVAL 63

Query: 64 -SEFLP 68
           +  LP
Sbjct: 64 ETSLLP 69


>ref|YP_004681652.1| hypothetical protein CNE_2c14570 [Cupriavidus necator N-1]
 gb|AEI80420.1| hypothetical protein CNE_2c14570 [Cupriavidus necator N-1]
          Length = 70

 Score = 74.7 bits (182), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 48/60 (80%)

Query: 4  ELDIYGVLVPALLLWLIVAYALSAVVSRVMQRFGFYRLVWHRALFNFALYVCLLGVVVYL 63
          E D+YGV VPA ++W++ A+A++A V  V+ R GFYR++WHR+LFNF+LY+ +LG +V L
Sbjct: 5  EFDLYGVFVPATVVWMLAAFAVTAGVRVVLARIGFYRIIWHRSLFNFSLYILVLGAIVAL 64


>ref|YP_001755083.1| hypothetical protein Mrad2831_2405 [Methylobacterium
          radiotolerans JCM 2831]
 gb|ACB24400.1| protein of unknown function DUF1656 [Methylobacterium
          radiotolerans JCM 2831]
          Length = 69

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/65 (58%), Positives = 47/65 (72%)

Query: 1  MRYELDIYGVLVPALLLWLIVAYALSAVVSRVMQRFGFYRLVWHRALFNFALYVCLLGVV 60
          M  E+D+YGV VP L LW+ VA+ALS  + R++   GFYRLVWHR LF+ ALYV LLG V
Sbjct: 1  MMGEIDLYGVFVPGLALWMAVAFALSLPLRRLLAATGFYRLVWHRPLFDLALYVVLLGGV 60

Query: 61 VYLSE 65
          V L+ 
Sbjct: 61 VTLAH 65