BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0104.0041.p (228 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_591085.1| hypothetical protein Acid345_2010 [Candidatus K... 69 5e-10 ref|YP_848178.1| hypothetical protein Sfum_4078 [Syntrophobacter... 52 6e-05 ref|YP_867148.1| hypothetical protein Mmc1_3252 [Magnetococcus s... 50 3e-04 ref|ZP_08821617.1| hypothetical protein ThidrDRAFT_0429 [Thiorho... 48 9e-04 ref|YP_003443722.1| hypothetical protein Alvin_1761 [Allochromat... 48 0.001 >ref|YP_591085.1| hypothetical protein Acid345_2010 [Candidatus Koribacter versatilis Ellin345] gb|ABF41011.1| hypothetical protein Acid345_2010 [Candidatus Koribacter versatilis Ellin345] Length = 223 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 34/212 (16%) Query: 18 LLAVAILAGA--AIPVMAQQFSADLVANKDDAAAAMGALRVSG--AKARIETSALPDGFF 73 L+A+ + A A A P SAD+ + G + SG R+E +A Sbjct: 23 LIAIVLCAAATWAQPPQFPSLSADMKMTGHRGEDSTGKMFFSGETKHMRMEIAARGHNMI 82 Query: 74 LI----DTRKPAAYFVRPAARVYMDA---------RQSSPLTRMFIPVDPDDPCRQWLAM 120 ++ +T P + + P ++YM+ RQ P + P DP +PC Sbjct: 83 MLVDSTNTANPKSTMIMPDQKMYMEMSAYGAGPGMRQRGPEIK---PYDPTNPC------ 133 Query: 121 AQLSAPIDLATWHCQRDGEETIAGYDTDIFRIAAPPGLSFVGWIDRARKFPVRIKTADGT 180 A + T C++ G ET+ GY D + + WI + FP++ + DGT Sbjct: 134 ----ASEEGTT--CKKVGTETMNGYVCDKWEFTGKENRTV--WISQKLHFPIKSVSQDGT 185 Query: 181 VIAADHIRDEPQPAQTFEIPAGLRKFDPQALI 212 + +I++ PQ A F +PAG +K D A++ Sbjct: 186 SVEFSNIKEGPQDASLFTVPAGYQKMDMGAMM 217 >ref|YP_848178.1| hypothetical protein Sfum_4078 [Syntrophobacter fumaroxidans MPOB] gb|ABK19743.1| conserved hypothetical protein [Syntrophobacter fumaroxidans MPOB] Length = 194 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 24/176 (13%) Query: 33 AQQFSADLVANKDDAAAAMGALRVSGAKARIETSALPDG-FFLIDTRKPAAYFVRPAARV 91 A +FSADLV A G + V G K R E D +I K + + P + Sbjct: 30 AVEFSADLVIQPKGEEAMKGKIYVKGDKVRQEILEEGDNQIMIIRPDKKVTWMISPDEKT 89 Query: 92 YMDARQSSPLTRMFIPVDPDDPC-RQWLAMAQLSAPIDLATWHCQRDGEETIAGYDTDIF 150 YM+ +P +D +W + ++ + GEETI+G T+ + Sbjct: 90 YME-----------MPYQAEDKTFEEWTENKEKNSKLI---------GEETISGIQTNKY 129 Query: 151 RIAAPPGLSFVGWIDRARKFPVRIKTADGTVIAADHIRDEPQPAQTFEIPAGLRKF 206 G WI + FP++++ A+ T + +I++ A FE+PAG K Sbjct: 130 E-NIEDGEKTYFWISKKFPFPIKVEDAEIT-MEYKNIKEGQVDAALFELPAGYEKM 183 >ref|YP_867148.1| hypothetical protein Mmc1_3252 [Magnetococcus sp. MC-1] gb|ABK45742.1| hypothetical protein Mmc1_3252 [Magnetococcus sp. MC-1] Length = 205 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 20/161 (12%) Query: 55 RVSGAKARIETSALPDG---FFLIDTRKPAAYFVRPAARVYMDARQSSPLTRMFIPVDPD 111 R+ K + T A+ +G +I T K ++ + P + Y++ + + P R +P + + Sbjct: 55 RMLYGKLGLRTEAVSEGEPVVLIIRTDKQKSWLLFPKTKRYLE-QPAMPDLRPPLPYEKN 113 Query: 112 DPCRQWLAMAQLSAPIDLATWHCQRDGEETIAGYDTDIFRIAAPPGLSF----VGWIDRA 167 C+Q + C +E ++G T +++ V WID A Sbjct: 114 SLCQQ------------TQQFRCTAQRDELVSGRVTKRWKVEHNRNNQIENYAVFWIDEA 161 Query: 168 RKFPVRIKTADGTVIAADHIRDEPQPAQTFEIPAGLRKFDP 208 K P+R + ADGT + I + A FEIP K++P Sbjct: 162 LKLPIRERYADGTTVTMQQIILQEPTADLFEIPGDFEKYEP 202 >ref|ZP_08821617.1| hypothetical protein ThidrDRAFT_0429 [Thiorhodococcus drewsii AZ1] gb|EGV33740.1| hypothetical protein ThidrDRAFT_0429 [Thiorhodococcus drewsii AZ1] Length = 253 Score = 48.1 bits (113), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 54/243 (22%), Positives = 92/243 (37%), Gaps = 54/243 (22%) Query: 18 LLAVAILAGAAIPVMAQQFSADLVANKDDAAAAMGALRVSGAKARIETSALPDGFFLI-D 76 L+ A++A A + QFSAD+V+ D + G + V + R+E + I D Sbjct: 12 FLSSAVMATAGAQIAGTQFSADMVSRGPDGQVSTGKMYVGDGRMRVEMNQQGKEVVRITD 71 Query: 77 TRKPAAYFVRPAARVYMDA-----RQSSPLTRMFIPVDPDDPCRQWLAMAQLSAPIDLAT 131 + + P + YM+ RQ SP + DPC L Sbjct: 72 QTQGRELLLFPDRKGYMERDLAADRQDSPASANA------DPC------------AGLDG 113 Query: 132 WHCQRDGEETIAG-----YDTDIFRIAAPPGLSFVGWIDRARKFPVRIKTADGTVIAADH 186 +C++ GEE + G ++ + R L+ V WID R P++ + +G + Sbjct: 114 VNCRKVGEEDVGGRAAVKWEMSVVRDGQT--LTGVQWIDVERGLPLKYRMPNGQSMELRM 171 Query: 187 IRDEP------------------QPAQTF-----EIPAGLRKFDPQALIRRIRQSDVWVE 223 + E QP +TF E+ +R+ P +R + + V + Sbjct: 172 VGKETIDGRAVEKWEMTSAAPNQQPVKTFQWYDPELKLSVREEFPGGYVRELDRIQVGDQ 231 Query: 224 PPA 226 P A Sbjct: 232 PDA 234 >ref|YP_003443722.1| hypothetical protein Alvin_1761 [Allochromatium vinosum DSM 180] gb|ADC62690.1| conserved hypothetical protein [Allochromatium vinosum DSM 180] Length = 256 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 23/173 (13%) Query: 35 QFSADLVANKDDAAAAMGALRVSGAKARIETSALPDGFFLI-DTRKPAAYFVRPAARVYM 93 QFSAD+++ D G + V + RIE S I D + + + P + YM Sbjct: 29 QFSADMISRGPDGQTTTGKMSVGANRMRIEMSHQGQEVIRIHDQTRQMEWMLFPDRQTYM 88 Query: 94 DARQSSPL-----TRMFIPVDPDDPCRQWLAMAQLSAPIDLATWHCQRDGEETIAGYDTD 148 + +S P+ +M P +PC+ + +C+R GEE +AG Sbjct: 89 E--RSVPMGAAAPGQMPAPSAETNPCQ------------GIEGLNCRRAGEEDVAGRRAV 134 Query: 149 IFRIAAP-PGLSFVG--WIDRARKFPVRIKTADGTVIAADHIRDEPQPAQTFE 198 + ++ G + G W+D R P++ + DG + + E +T E Sbjct: 135 KWEMSMTREGQTLTGAQWLDVERGLPLKYQMPDGQSMELRMLGTESIAGRTVE 187