BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0104.0039.p (458 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_05112129.1| hypothetical protein SADFL11_14 [Labrenzia al... 280 4e-73 ref|ZP_01038089.1| cytochrome c Hsc [Roseovarius sp. 217] >gi|85... 254 2e-65 ref|ZP_01881427.1| hypothetical protein RTM1035_00065 [Roseovari... 254 2e-65 ref|ZP_00964336.1| hypothetical protein NAS141_01876 [Sulfitobac... 195 1e-47 ref|YP_617346.1| hypothetical protein Sala_2304 [Sphingopyxis al... 104 3e-20 >ref|ZP_05112129.1| hypothetical protein SADFL11_14 [Labrenzia alexandrii DFL-11] gb|EEE48120.1| hypothetical protein SADFL11_14 [Labrenzia alexandrii DFL-11] Length = 617 Score = 280 bits (716), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 159/393 (40%), Positives = 219/393 (55%), Gaps = 30/393 (7%) Query: 45 DALDKPREVFQSERTG---AKSYLVNLGDLAFNSPGLLGDVARQAGVSCGTCHVNGANNA 101 D + PR + Q E G A LV GD+ F+SP + G A++ G++C TCH N Sbjct: 232 DQSELPRLILQFEEAGEDEANLPLVAYGDMLFDSPEIFGGPAQELGIACSTCHNRSDINR 291 Query: 102 KFFMPKMSSRPGTFDTTGPLFNPKANNLAFDPVRIPSLRGARYLAPYGADGRFASLRDFV 161 +FF+P +S RPG D G FNP N+ D + PS+RG R+ APYG DGR SLR F+ Sbjct: 292 EFFIPGLSYRPGGMDVDGAFFNPMFNDRKDDHLDTPSMRGIRFTAPYGRDGREPSLRRFI 351 Query: 162 HNVITSEFAGPEPSPATLDAIVAYIHDIEFLPNPSLGPAGRLAGKITDAERRGEALFAKP 221 NVI +EFAG EP+P LDA+VAY+ + ++LPNP + AGRL K +DA ++GEA+F Sbjct: 352 RNVIVTEFAGKEPTPFQLDALVAYVREFDWLPNPKIDRAGRLTDKASDAAKQGEAIFNTD 411 Query: 222 FPHDPSLSCAGCHVPSSGFVDHQQHDIGS------GGL---FKTPTLRNADFNAPYFHDG 272 FP SCA CH P F D HDIGS GG F+TPTLRN +F APY HDG Sbjct: 412 FPGLNGKSCASCHTPDQNFTDGLTHDIGSSERPFPGGTATAFETPTLRNINFTAPYMHDG 471 Query: 273 RFDNYNQVVDYFDRTFQLDLSAQGKDDLVAYLTAVGDGVQPYER-DGAGATLK----EIN 327 VVD+F+ T L L + + DL AYL A+GDG +PY+R +G + + E+ Sbjct: 472 SLPTLASVVDWFNDTRNLGLDEEQRADLTAYLEAIGDGEEPYQRFEGRDSVFRLSWEELT 531 Query: 328 DFSTVLATAIPAGDKDIVALAVDTIGRELRELTEQYPDRKNTSVAGGEQQRVLARNGLKE 387 F++ L T +PA D +AL +DT+ +L + SV + A+ + E Sbjct: 532 TFASTLDTLLPARDAQNIALLIDTVAPDL---------AADASVMTNQA----AKPEIYE 578 Query: 388 LVLTLRRIEMAVAAGRNADAATEFRNYRNLMAA 420 L LR + A A G +A +++ + + AA Sbjct: 579 LSAILRAVGDASAEGDWGEAEQQWQKFNTMQAA 611 >ref|ZP_01038089.1| cytochrome c Hsc [Roseovarius sp. 217] gb|EAQ23313.1| cytochrome c Hsc [Roseovarius sp. 217] Length = 626 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 145/352 (41%), Positives = 190/352 (53%), Gaps = 23/352 (6%) Query: 22 GRAVAFPVDGDKTVLPVATELNEDALDKPREVFQSERTGAKSY---LVNLGDLAFNSPGL 78 GR + P ++ P + ++D L PR V E G LV GD+ F+S + Sbjct: 224 GRTIEVP----PSLPPGSDIFDQDPL--PRLVLNFEEQGIDETDLPLVAYGDMLFDSAQI 277 Query: 79 LGDVARQAGVSCGTCHVNGANNAKFFMPKMSSRPGTFDTTGPLFNPKANNLAFDPVRIPS 138 G+ A+ GV+C TCH N + F+P S +PG D G FNP N+ DP+ IPS Sbjct: 278 FGNPAQDLGVACSTCHNRSDVNQRLFIPGASHQPGGIDVDGAFFNPIFNDRRDDPIDIPS 337 Query: 139 LRGARYLAPYGADGRFASLRDFVHNVITSEFAGPEPSPATLDAIVAYIHDIEFLPNPSLG 198 LRG R+ PYG DGRFASLRDF NVI +EF G EP+P LDA++AY+ + +FLPN L Sbjct: 338 LRGLRFTGPYGRDGRFASLRDFTRNVIVNEFGGDEPTPFMLDALLAYMREFDFLPNSMLT 397 Query: 199 PAGRLAGKITDAERRGEALFAKPFPHDPSLSCAGCHVPSSGFVDHQQHDIGS-------- 250 G+L +A +RGEA+F PF SCA CHVP + F+D Q HDIGS Sbjct: 398 RDGQLTEAAPEAAQRGEAIFNTPFAALGDRSCASCHVPDTNFLDRQAHDIGSVASAYDGA 457 Query: 251 -GGLFKTPTLRNADFNAPYFHDGRFDNYNQVVDYFDRTFQLDLSAQGKDDLVAYLTAVGD 309 G TPTL + APYFHDG VVD+FD + L L+A + DL AYL VG Sbjct: 458 RTGAMDTPTLLGTAYTAPYFHDGSLPTLAAVVDWFDESKALRLTAAERADLTAYLETVGA 517 Query: 310 GVQPYERDGAGAT-----LKEINDFSTVLATAIPAGDKDIVALAVDTIGREL 356 +PYE A T E+ F++ L T +P D + + L DT+ +L Sbjct: 518 ADEPYEAFDAENTAFRLAFSELTTFASTLDTLLPQRDAEHILLLTDTVAVDL 569 >ref|ZP_01881427.1| hypothetical protein RTM1035_00065 [Roseovarius sp. TM1035] gb|EDM30009.1| hypothetical protein RTM1035_00065 [Roseovarius sp. TM1035] Length = 626 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 145/356 (40%), Positives = 191/356 (53%), Gaps = 23/356 (6%) Query: 18 LALLGRAVAFPVDGDKTVLPVATELNEDALDKPREVFQSERTGAKSY---LVNLGDLAFN 74 + L GR + P ++ P + ++D L PR V E G LV GD+ F+ Sbjct: 220 VVLSGRTIEVP----PSLPPGSDIFDQDPL--PRLVLNFEEQGIDETDLPLVAYGDMLFD 273 Query: 75 SPGLLGDVARQAGVSCGTCHVNGANNAKFFMPKMSSRPGTFDTTGPLFNPKANNLAFDPV 134 S + G+ A+ GV+C TCH N + F+P S +PG D G FNP N+ DP+ Sbjct: 274 SAQIFGNPAQGLGVACSTCHNRSDVNQRLFIPGASHQPGAIDVDGAFFNPIFNDRRDDPI 333 Query: 135 RIPSLRGARYLAPYGADGRFASLRDFVHNVITSEFAGPEPSPATLDAIVAYIHDIEFLPN 194 IPSLRG R+ PYG DGRFASLRDF NVI +EF G EP+P LDA++AY+ + +FLPN Sbjct: 334 DIPSLRGLRFTGPYGRDGRFASLRDFTRNVIVNEFGGDEPTPFMLDALLAYMLEFDFLPN 393 Query: 195 PSLGPAGRLAGKITDAERRGEALFAKPFPHDPSLSCAGCHVPSSGFVDHQQHDIGS---- 250 L P G+L +A +RGEA+F PF SC+ CHVP + F+D Q HDIGS Sbjct: 394 SMLTPDGQLTEAAPEAAQRGEAIFNTPFAALGDRSCSSCHVPDTNFLDRQAHDIGSVALA 453 Query: 251 -----GGLFKTPTLRNADFNAPYFHDGRFDNYNQVVDYFDRTFQLDLSAQGKDDLVAYLT 305 G TPTL + APYFHDG VVD+FD + L L+ + DL AYL Sbjct: 454 YDGARTGAMDTPTLLGTVYTAPYFHDGSLPTLAAVVDWFDESKALGLTGAERADLTAYLE 513 Query: 306 AVGDGVQPYERDGAGAT-----LKEINDFSTVLATAIPAGDKDIVALAVDTIGREL 356 VG +PYE A T E+ F++ L T +P D + L DT+ +L Sbjct: 514 TVGAADEPYEAFDAENTAFRLAFSELTTFASTLDTLLPQRDAKHILLLTDTVAADL 569 >ref|ZP_00964336.1| hypothetical protein NAS141_01876 [Sulfitobacter sp. NAS-14.1] gb|EAP78976.1| hypothetical protein NAS141_01876 [Sulfitobacter sp. NAS-14.1] Length = 475 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 99/212 (46%), Positives = 122/212 (57%), Gaps = 9/212 (4%) Query: 65 LVNLGDLAFNSPGLLGDVARQAGVSCGTCHVNGANNAKFFMPKMSSRPGTFDTTGPLFNP 124 LV GD+ F+S L G A+ G++C TCH N + F+P S + G D G FNP Sbjct: 264 LVAYGDMLFDSAQLFGSPAQDLGIACSTCHNRSDVNQRLFIPGASHQLGAIDVDGAFFNP 323 Query: 125 KANNLAFDPVRIPSLRGARYLAPYGADGRFASLRDFVHNVITSEFAGPEPSPATLDAIVA 184 N+ DP+ IPSLRG R+ PYG DGRFASLRDF NV+ +EF G EP+P LDA+VA Sbjct: 324 IFNDRRDDPLDIPSLRGLRFTGPYGRDGRFASLRDFTRNVVVNEFGGKEPTPFMLDALVA 383 Query: 185 YIHDIEFLPNPSLGPAGRLAGKITDAERRGEALFAKPFPHDPSLSCAGCHVPSSGFVDHQ 244 Y+ + +FLPN L GRL +A RRGE +F PF SCA CHVP + F+D Q Sbjct: 384 YMLEFDFLPNSMLTTDGRLTDTTQEAARRGEEIFNTPFARLGDRSCASCHVPDANFLDRQ 443 Query: 245 QHDIGS---------GGLFKTPTLRNADFNAP 267 HDIGS G TPTL + AP Sbjct: 444 AHDIGSVAPGYEGARAGALDTPTLLGTAYTAP 475 >ref|YP_617346.1| hypothetical protein Sala_2304 [Sphingopyxis alaskensis RB2256] gb|ABF54013.1| hypothetical protein Sala_2304 [Sphingopyxis alaskensis RB2256] Length = 309 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/145 (44%), Positives = 79/145 (54%), Gaps = 5/145 (3%) Query: 60 GAKSYLVNLGDLAFNSPGLLGDVARQAGVSCGTCHVNGANNAKFFMPKMSSRPGTFDTTG 119 G+ + V G+ FNSP LLG A +AG+SC CHVNG +NA F M +S R GT D T Sbjct: 50 GSAAVEVQAGEALFNSPRLLGGQAAKAGLSCAGCHVNGRDNAHFLMAGVSDRAGTADVTH 109 Query: 120 PLFNPKANNLAFDPVRIPSLRGARYLAPYGADGRFASLRDFVHNVITSEFAGPEPSPATL 179 F N FDPV IP L ++ A G +L FV ++I EFAG EP+PA L Sbjct: 110 SFFGAARGNGRFDPVTIPDLARPGKVSRDPAGG---ALESFVRDLIVDEFAGREPTPAML 166 Query: 180 DAIVAYIHDIEFLPNPSLGPAGRLA 204 A+ AY+ I P P P GR A Sbjct: 167 AALAAYVRAIA--PCPDGDPPGRRA 189