BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0104.0036.p         (214 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_576075.1| putative general secretion pathway protein N [N...   124   7e-27
ref|YP_001208189.1| putative general secretion pathway protein N...   119   4e-25
ref|YP_001237433.1| putative general secretion pathway protein N...   105   3e-21
ref|YP_001203438.1| hypothetical protein BRADO1302 [Bradyrhizobi...   104   8e-21
emb|CAJ01537.1| putative general secretory pathway protein N [un...    99   5e-19

>ref|YP_576075.1| putative general secretion pathway protein N [Nitrobacter
           hamburgensis X14]
 gb|ABE61615.1| putative general secretion pathway protein N [Nitrobacter
           hamburgensis X14]
          Length = 228

 Score =  124 bits (312), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 72/119 (60%), Positives = 85/119 (71%), Gaps = 3/119 (2%)

Query: 71  SANPLWGIPLKTLSNTRDRPVFSPSRRPPPAVVAEPEVSKPAPAPPRKVAIEPPPLSLVG 130
           SANPLW IPL  LSNTR RP+FS SRRPPPA VA    +   P       +E P LSLVG
Sbjct: 80  SANPLWAIPLAKLSNTRARPIFSASRRPPPAAVALVPAATAPPP---PPRVERPELSLVG 136

Query: 131 TIAGDDESFGIFLDQSTKTALRLKIGDDFQGWKLRTINGREVTMQKDDQGAVLTLPQPG 189
           T+ GDD  FG+F+D +T+  LRLKIGDDFQGWKL ++ GREVT+  D Q A+L+LPQPG
Sbjct: 137 TVVGDDMRFGVFIDPATRATLRLKIGDDFQGWKLHSVQGREVTLTHDGQTAILSLPQPG 195


>ref|YP_001208189.1| putative general secretion pathway protein N, GspN [Bradyrhizobium
           sp. ORS 278]
 emb|CAL79974.1| putative General secretion pathway protein N, GspN [Bradyrhizobium
           sp. ORS 278]
          Length = 208

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/127 (51%), Positives = 87/127 (68%), Gaps = 4/127 (3%)

Query: 71  SANPLWGIPLKTLSNTRDRPVFSPSRRPPPAVVAEPEVSKPAPAPPRKVAIEPPPLSLVG 130
           S NPLW +PL  LS TRDRP+FSPSRRPPP V+A P ++   P PP     E P L LVG
Sbjct: 66  SINPLWDLPLTVLSATRDRPIFSPSRRPPP-VMAAPVMATREPPPPPPREPERPNLQLVG 124

Query: 131 TIAGDDESFGIFLDQSTKTALRLKIGDDFQGWKLRTINGREVTMQKDDQGAVLTLPQPGG 190
           T+  D+ESFGIFLD S++ +LRL++G +  GW L+++  R+VT+QKD +   L +PQ G 
Sbjct: 125 TVVSDEESFGIFLDPSSQASLRLRLGAEHDGWLLQSVRSRQVTLQKDAEMVTLPMPQAG- 183

Query: 191 DESGDVR 197
              GDV+
Sbjct: 184 --EGDVQ 188


>ref|YP_001237433.1| putative general secretion pathway protein N, GspN [Bradyrhizobium
           sp. BTAi1]
 gb|ABQ33527.1| putative General secretion pathway protein N, GspN [Bradyrhizobium
           sp. BTAi1]
          Length = 174

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/130 (47%), Positives = 81/130 (62%), Gaps = 1/130 (0%)

Query: 71  SANPLWGIPLKTLSNTRDRPVFSPSRRPPPAVVAEPEVSKPAPAPPRKVAIEPPPLSLVG 130
           SANPLW +P+  L  TR+RP+FS SRRPPP V A P +   A  PP     E P L LVG
Sbjct: 32  SANPLWEVPIGALPATRERPIFSASRRPPPQVAA-PVMVMRAAPPPPPPEPERPNLQLVG 90

Query: 131 TIAGDDESFGIFLDQSTKTALRLKIGDDFQGWKLRTINGREVTMQKDDQGAVLTLPQPGG 190
           T+ GD+ESFGIF+D S++  LRL+IG   +GW+L  +  RE  ++KD +  +L +PQ G 
Sbjct: 91  TVIGDEESFGIFVDPSSQLPLRLRIGAAHEGWRLEALKPREAVLRKDGETVILPMPQLGQ 150

Query: 191 DESGDVRLVP 200
               D   VP
Sbjct: 151 SADDDSDPVP 160


>ref|YP_001203438.1| hypothetical protein BRADO1302 [Bradyrhizobium sp. ORS 278]
 emb|CAL75201.1| hypothetical protein; putative signal peptide [Bradyrhizobium sp.
           ORS 278]
          Length = 206

 Score =  104 bits (260), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 62/124 (50%), Positives = 74/124 (59%), Gaps = 9/124 (7%)

Query: 71  SANPLWGIPLKTLSNTRDRPVFSPSRRPPPAVVAEPEVS----KPAPAPPRKVAIEPPPL 126
           S NPLW +PL  LS TR+RP+FSPSRRPPP     P V+     P P PP     E P L
Sbjct: 39  SGNPLWSMPLDQLSATRERPLFSPSRRPPPTEAPPPAVADVPVAPEPGPP-----ERPSL 93

Query: 127 SLVGTIAGDDESFGIFLDQSTKTALRLKIGDDFQGWKLRTINGREVTMQKDDQGAVLTLP 186
           +LVGT+   D    IFLD  +KT LR++ G D+QGW LR +  R VT+QK D  AVL   
Sbjct: 94  ALVGTVVNGDHGLAIFLDPGSKTPLRIRAGADYQGWTLRRVEARSVTLQKGDDLAVLRFA 153

Query: 187 QPGG 190
            P G
Sbjct: 154 SPAG 157


>emb|CAJ01537.1| putative general secretory pathway protein N [uncultured bacterium]
          Length = 195

 Score = 98.6 bits (244), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 76/118 (64%), Gaps = 3/118 (2%)

Query: 73  NPLWGIPLKTLSNTRDRPVFSPSRRPP-PAVVAEPEVSKPAPAPPRKVAIEPPPLSLVGT 131
           NPLWGIP+  L  TR+RPVFS SRRPP P +VAE  V+ P P        E PPL+LVGT
Sbjct: 61  NPLWGIPVSALDATRERPVFSASRRPPRPPIVAERVVAAPPPPK--PAEPEHPPLTLVGT 118

Query: 132 IAGDDESFGIFLDQSTKTALRLKIGDDFQGWKLRTINGREVTMQKDDQGAVLTLPQPG 189
             G  ++  + LD++TKT +RL +G+   GW LR+++ R + ++K+ Q   L LP PG
Sbjct: 119 AIGTQKNVAVVLDRTTKTIVRLHVGETLSGWILRSVDSRTMRVEKNSQTVTLALPAPG 176