BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0104.0029.p (154 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_576081.1| general secretion pathway protein H [Nitrobacte... 222 1e-56 ref|YP_001237427.1| putative general secretion pathway protein H... 182 2e-44 ref|YP_532870.1| putative general secretion pathway protein H [R... 175 2e-42 ref|YP_001208195.1| putative general secretion pathway protein H... 174 4e-42 ref|YP_001203432.1| putative general secretion pathway protein H... 171 5e-41 >ref|YP_576081.1| general secretion pathway protein H [Nitrobacter hamburgensis X14] gb|ABE61621.1| General secretion pathway protein H [Nitrobacter hamburgensis X14] Length = 157 Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 105/154 (68%), Positives = 127/154 (82%) Query: 1 MNDAMQRGFTLLEMVCVLAIVALLAAVLLPFIPHQTSRSRLQAYALQTATLLKADRNAAI 60 +N+A Q GFTL+EMVCV+A++AL+AAVLLPF+P TSR+RLQAYAL+ ATLLKADRNAA+ Sbjct: 4 LNEARQHGFTLIEMVCVIALIALMAAVLLPFLPQHTSRARLQAYALEAATLLKADRNAAV 63 Query: 61 ERSTSVATLVDAPSRVIHSGASRMTVRIPEDVRFDAVLPQSCQRRAALSTIRFFANGGSC 120 R VATLVD PSR I SGA+ +RIP+DVRFDA+LPQ+C+R A LSTI FFA+G SC Sbjct: 64 GRRADVATLVDPPSRTIRSGATAQRLRIPDDVRFDALLPQTCRRHAVLSTISFFADGMSC 123 Query: 121 GGSIALTRLDAGYEVRVNWLTGRVEIVARDVAAN 154 GG+IAL RLD YE+RVNWLT R+EIV R +N Sbjct: 124 GGTIALARLDTTYEIRVNWLTARIEIVDRSTRSN 157 >ref|YP_001237427.1| putative general secretion pathway protein H, GspH [Bradyrhizobium sp. BTAi1] gb|ABQ33521.1| putative General secretion pathway protein H, GspH [Bradyrhizobium sp. BTAi1] Length = 154 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 88/152 (57%), Positives = 114/152 (75%) Query: 1 MNDAMQRGFTLLEMVCVLAIVALLAAVLLPFIPHQTSRSRLQAYALQTATLLKADRNAAI 60 M+D QRGFTLLEMVCVLAIVALLA+V P++P QTSR RLQAYALQ TLLK+DR A++ Sbjct: 1 MSDDSQRGFTLLEMVCVLAIVALLASVAWPYLPRQTSRPRLQAYALQAVTLLKSDRAASM 60 Query: 61 ERSTSVATLVDAPSRVIHSGASRMTVRIPEDVRFDAVLPQSCQRRAALSTIRFFANGGSC 120 V T +D R+I SG+ +++P+DV F A LP+SCQ+R ++TI FF +G SC Sbjct: 61 RNGLRVDTRLDTSRRLISSGSGGAALKLPDDVGFQATLPRSCQQRPVMATISFFPDGLSC 120 Query: 121 GGSIALTRLDAGYEVRVNWLTGRVEIVARDVA 152 GG+I L+R D E+RVNWLTGR++IV+R +A Sbjct: 121 GGAITLSRADLSLEIRVNWLTGRIDIVSRALA 152 >ref|YP_532870.1| putative general secretion pathway protein H [Rhodopseudomonas palustris BisB18] gb|ABD88551.1| putative general secretion pathway protein H precursor [Rhodopseudomonas palustris BisB18] Length = 139 Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 86/137 (62%), Positives = 107/137 (78%) Query: 14 MVCVLAIVALLAAVLLPFIPHQTSRSRLQAYALQTATLLKADRNAAIERSTSVATLVDAP 73 MVCVLA+VALLAA+LLP P TSR RL AYA++ LLKADRNAA+ R +VA +VDAP Sbjct: 1 MVCVLAMVALLAAILLPRSPTTTSRPRLLAYAVELGALLKADRNAALWRRGAVAAVVDAP 60 Query: 74 SRVIHSGASRMTVRIPEDVRFDAVLPQSCQRRAALSTIRFFANGGSCGGSIALTRLDAGY 133 R++ SG++ VR+P+DV FDA+LP+ C R ALS+I FF +G SCGG+I LTR +GY Sbjct: 61 GRMVRSGSTDRVVRVPDDVDFDALLPKRCNGRMALSSISFFGSGMSCGGTIRLTRFGSGY 120 Query: 134 EVRVNWLTGRVEIVARD 150 EVRVNWLTG V+IVA+D Sbjct: 121 EVRVNWLTGGVDIVAQD 137 >ref|YP_001208195.1| putative general secretion pathway protein H, GspH [Bradyrhizobium sp. ORS 278] emb|CAL79980.1| putative General secretion pathway protein H, GspH [Bradyrhizobium sp. ORS 278] Length = 153 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 83/152 (54%), Positives = 112/152 (73%), Gaps = 1/152 (0%) Query: 1 MNDAMQRGFTLLEMVCVLAIVALLAAVLLPFIPHQTSRSRLQAYALQTATLLKADRNAAI 60 M+D QRGFTLLEMVCVLAI+A+LA+V LP++P QTSR RLQAYALQ TLLK+DR A++ Sbjct: 1 MSDGRQRGFTLLEMVCVLAIIAMLASVALPYLPRQTSRPRLQAYALQAVTLLKSDRAASM 60 Query: 61 ERSTSVATLVDAPSRVIHSGASRMTVRIPEDVRFDAVLPQSCQRRAALSTIRFFANGGSC 120 + T +D R+I +G +++P+DV F A LP+SCQ+R +TI FF +G SC Sbjct: 61 RSGMRIDTQIDTSRRLIRAGTGP-ALKLPDDVAFQATLPRSCQQRPVRATISFFPDGLSC 119 Query: 121 GGSIALTRLDAGYEVRVNWLTGRVEIVARDVA 152 GG+I ++R D E+RVNWLTG ++IV+R +A Sbjct: 120 GGAITMSRADLSLEIRVNWLTGHIDIVSRGLA 151 >ref|YP_001203432.1| putative general secretion pathway protein H [Bradyrhizobium sp. ORS 278] emb|CAL75195.1| putative General secretion pathway protein H [Bradyrhizobium sp. ORS 278] Length = 142 Score = 171 bits (432), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 80/135 (59%), Positives = 104/135 (77%) Query: 14 MVCVLAIVALLAAVLLPFIPHQTSRSRLQAYALQTATLLKADRNAAIERSTSVATLVDAP 73 M+C LAIVA LAAVLLP +P QTSRS+L+AYA++ A LLKADRNAA+ R V+T +D Sbjct: 1 MMCALAIVATLAAVLLPAMPRQTSRSQLEAYAIELAALLKADRNAAMNRGLEVSTRIDTR 60 Query: 74 SRVIHSGASRMTVRIPEDVRFDAVLPQSCQRRAALSTIRFFANGGSCGGSIALTRLDAGY 133 +R + S S +R+P+DVRF+ VLP+SC R A +I FF +G SCGG ++LT LDAGY Sbjct: 61 ARSMRSSVSGQEIRLPDDVRFETVLPRSCDDRPAFESISFFGSGMSCGGVVSLTHLDAGY 120 Query: 134 EVRVNWLTGRVEIVA 148 ++RVNWLTGR+EIV+ Sbjct: 121 QIRVNWLTGRIEIVS 135