BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0104.0018.p (366 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773944.1| D-glutamate deacylase [Bradyrhizobium japonicum... 669 0.0 ref|YP_001242505.1| D-glutamate deacylase [Bradyrhizobium sp. BT... 476 e-132 ref|YP_001203531.1| D-glutamate deacylase [Bradyrhizobium sp. OR... 473 e-131 ref|YP_191594.1| D-glutamate deacylase [Gluconobacter oxydans 62... 470 e-130 ref|YP_004866874.1| D-glutamate deacylase [Gluconacetobacter xyl... 465 e-129 >ref|NP_773944.1| D-glutamate deacylase [Bradyrhizobium japonicum USDA 110] dbj|BAC52569.1| bll7304 [Bradyrhizobium japonicum USDA 110] Length = 539 Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/366 (88%), Positives = 343/366 (93%) Query: 1 VISGGRVVDPASGMDAIGDVAVVDGKIAAVGTGLGGAERQIDATGLVVAPGFIDLHAHGQ 60 VISGGRVVDPASGMDAIGDVAVVDGKIAAVG+ LGGAER IDATGLVVAPGFIDLHAHGQ Sbjct: 48 VISGGRVVDPASGMDAIGDVAVVDGKIAAVGSSLGGAERVIDATGLVVAPGFIDLHAHGQ 107 Query: 61 TIPADRMQAFDGVTTSLDLEAGVLPVASWYKRQAEKGRVLNYGAAANWAFARIGAMTGSN 120 +IPADRMQAFDGVTT+LDLEAGVLPVASWY+RQA KGRVLNYGAA NWAFARIGAMTGSN Sbjct: 108 SIPADRMQAFDGVTTTLDLEAGVLPVASWYERQARKGRVLNYGAATNWAFARIGAMTGSN 167 Query: 121 SESSLESFGAAMRDRRWIENVATEGEVGGILDRLAIGLNEGGIGIGILNAYAPGAGVQEL 180 +ESSLE+FG AMRDRRW++NVA++ EV GILDRLA GLNEGGIGIGILNAYAPGAGVQEL Sbjct: 168 AESSLEAFGNAMRDRRWMDNVASDAEVAGILDRLARGLNEGGIGIGILNAYAPGAGVQEL 227 Query: 181 TAVCQLAADHAVPTFTHVAYMSRIDPESAAEAYIRLIGYAGATGAHMHICHFNSSSKTDI 240 TAVCQLAA VPTFTHVAYMSRIDPESAAEAYIRLIGYAGATGAHMHICHFNSSSKTDI Sbjct: 228 TAVCQLAAKQDVPTFTHVAYMSRIDPESAAEAYIRLIGYAGATGAHMHICHFNSSSKTDI 287 Query: 241 ERCVALIAKAQAQGLPITVEAYPYGTGSTVLAATFFSDPKFEERNGLGYDSVQRVTDGHR 300 ERC L+ KAQAQGLPITVEAYPYGTGSTVLAA FFSDP+F ERNG GYDSVQRVTDG+R Sbjct: 288 ERCRVLVEKAQAQGLPITVEAYPYGTGSTVLAAAFFSDPQFVERNGTGYDSVQRVTDGYR 347 Query: 301 FGSREELLAAQAEEPSTLVLWHVLDIENNAHHRDLLDMAVLYPGGAIASDAMPWTLSDGR 360 F R ELL AQAEEPS+LVLWH+LDIENN+HHRDLLDM+VLYPGGAIASDAMPWT SDG+ Sbjct: 348 FHDRAELLRAQAEEPSSLVLWHILDIENNSHHRDLLDMSVLYPGGAIASDAMPWTTSDGK 407 Query: 361 PYTGDA 366 YTGDA Sbjct: 408 TYTGDA 413 >ref|YP_001242505.1| D-glutamate deacylase [Bradyrhizobium sp. BTAi1] gb|ABQ38599.1| dihydroorotase [Bradyrhizobium sp. BTAi1] Length = 497 Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust. Identities = 227/366 (62%), Positives = 275/366 (75%) Query: 1 VISGGRVVDPASGMDAIGDVAVVDGKIAAVGTGLGGAERQIDATGLVVAPGFIDLHAHGQ 60 +I GGRV+DP + +DA DVAV DG IAAVG G A++ IDA GL V PGFIDLHAHGQ Sbjct: 7 IIRGGRVLDPETKLDATADVAVKDGAIAAVGDIAGVADQVIDAAGLAVVPGFIDLHAHGQ 66 Query: 61 TIPADRMQAFDGVTTSLDLEAGVLPVASWYKRQAEKGRVLNYGAAANWAFARIGAMTGSN 120 ++PADRMQAFDGVTT+L+LE GV+PVA WY Q GR LNYGAAA W FARI MT Sbjct: 67 SLPADRMQAFDGVTTTLELEIGVMPVARWYDEQEAIGRTLNYGAAAGWVFARIATMTTQQ 126 Query: 121 SESSLESFGAAMRDRRWIENVATEGEVGGILDRLAIGLNEGGIGIGILNAYAPGAGVQEL 180 + SS+ G AMRD+RWIE VAT E I++R GL++GG+GI NAYAPG G++EL Sbjct: 127 TASSIAGMGEAMRDKRWIEEVATAAETAEIVERTRQGLDQGGLGIAFPNAYAPGTGIKEL 186 Query: 181 TAVCQLAADHAVPTFTHVAYMSRIDPESAAEAYIRLIGYAGATGAHMHICHFNSSSKTDI 240 + +C LAA VPT+TH+AYMS +DP S+ +AY RLIG AG+TGAHMHICHFNS+S D+ Sbjct: 187 SELCSLAASQDVPTYTHIAYMSNVDPRSSVDAYTRLIGLAGSTGAHMHICHFNSTSLQDV 246 Query: 241 ERCVALIAKAQAQGLPITVEAYPYGTGSTVLAATFFSDPKFEERNGLGYDSVQRVTDGHR 300 RC L+ AQAQGL +TVEAYPYGTGSTV+ A FF+DP F +R G GYD+++ V + HR Sbjct: 247 GRCAELVRTAQAQGLKVTVEAYPYGTGSTVVGADFFADPAFCQRMGTGYDAIEMVAERHR 306 Query: 301 FGSREELLAAQAEEPSTLVLWHVLDIENNAHHRDLLDMAVLYPGGAIASDAMPWTLSDGR 360 GSR+ELL Q +P LVL H LD+ N HRDLLD++VL+PGGAIASDAMPW LS+G Sbjct: 307 LGSRDELLQRQQTDPGALVLIHFLDVAVNPRHRDLLDVSVLFPGGAIASDAMPWILSNGT 366 Query: 361 PYTGDA 366 YTG+A Sbjct: 367 DYTGEA 372 >ref|YP_001203531.1| D-glutamate deacylase [Bradyrhizobium sp. ORS 278] emb|CAL75294.1| N-acyl-D-glutamate deacylase [Bradyrhizobium sp. ORS 278] Length = 497 Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust. Identities = 222/366 (60%), Positives = 272/366 (74%) Query: 1 VISGGRVVDPASGMDAIGDVAVVDGKIAAVGTGLGGAERQIDATGLVVAPGFIDLHAHGQ 60 +I GGRV+DP + DA DVA+ G IAAVG G A++ IDA GL V PGFIDLHAHGQ Sbjct: 7 IIRGGRVLDPETRFDATADVAIKTGAIAAVGEIAGAADKVIDANGLAVVPGFIDLHAHGQ 66 Query: 61 TIPADRMQAFDGVTTSLDLEAGVLPVASWYKRQAEKGRVLNYGAAANWAFARIGAMTGSN 120 ++PADRMQAFDGVTT+L+LE GV+PVA WY Q GR LNYGAAA W FARI MT Sbjct: 67 SLPADRMQAFDGVTTTLELEIGVMPVARWYDEQEAIGRTLNYGAAAGWVFARIATMTTQQ 126 Query: 121 SESSLESFGAAMRDRRWIENVATEGEVGGILDRLAIGLNEGGIGIGILNAYAPGAGVQEL 180 + S++ G A RD+RW+E VAT E I++R GL +GG+GI NAYAPG G++EL Sbjct: 127 TASTIAGMGEATRDKRWVEEVATAAETAEIVERTRQGLEQGGLGIAFPNAYAPGTGIKEL 186 Query: 181 TAVCQLAADHAVPTFTHVAYMSRIDPESAAEAYIRLIGYAGATGAHMHICHFNSSSKTDI 240 + +C LAA H VPT+TH+AYMS +DP S+ +AY RLIG AG+TGAHMHICHFNS+S D+ Sbjct: 187 SELCSLAARHDVPTYTHIAYMSNVDPRSSVDAYTRLIGLAGSTGAHMHICHFNSTSLQDV 246 Query: 241 ERCVALIAKAQAQGLPITVEAYPYGTGSTVLAATFFSDPKFEERNGLGYDSVQRVTDGHR 300 ERC L+ AQ QGL +T EAYPYGTGSTV+ A FF+DP F +R G GYD+++ V + HR Sbjct: 247 ERCAELVQTAQRQGLKVTTEAYPYGTGSTVVGAGFFADPAFCQRMGTGYDAIEMVAERHR 306 Query: 301 FGSREELLAAQAEEPSTLVLWHVLDIENNAHHRDLLDMAVLYPGGAIASDAMPWTLSDGR 360 GSR+ELL Q ++P LVL H LD+ N HRDLLD++VL+PGGAIASDAMPW L++G Sbjct: 307 LGSRDELLKRQQDDPGALVLIHFLDVAANQRHRDLLDVSVLFPGGAIASDAMPWILANGT 366 Query: 361 PYTGDA 366 YTGDA Sbjct: 367 DYTGDA 372 >ref|YP_191594.1| D-glutamate deacylase [Gluconobacter oxydans 621H] gb|AAW60938.1| D-aminoacylase [Gluconobacter oxydans 621H] Length = 496 Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust. Identities = 227/364 (62%), Positives = 270/364 (74%) Query: 1 VISGGRVVDPASGMDAIGDVAVVDGKIAAVGTGLGGAERQIDATGLVVAPGFIDLHAHGQ 60 VI G +VDP +G++ +GDVAV DG I VG+ G A+R+IDATGLVVAPGFIDLHAHGQ Sbjct: 5 VIRNGLLVDPETGLEQVGDVAVQDGIIQRVGSFSGNAQREIDATGLVVAPGFIDLHAHGQ 64 Query: 61 TIPADRMQAFDGVTTSLDLEAGVLPVASWYKRQAEKGRVLNYGAAANWAFARIGAMTGSN 120 + +DRMQAFDGVTTSL+LE G+LPV++WY RQ E+GRVLNYGA+ WAFARI AM G Sbjct: 65 CVASDRMQAFDGVTTSLELEVGILPVSNWYARQQERGRVLNYGASVAWAFARISAMIGRP 124 Query: 121 SESSLESFGAAMRDRRWIENVATEGEVGGILDRLAIGLNEGGIGIGILNAYAPGAGVQEL 180 E SL G D RW EN A+ E+ IL + GL+EGG+GIGI +AY PG G +EL Sbjct: 125 VEPSLSFMGKCYDDPRWSENTASSSELRDILSLVGQGLSEGGLGIGIPHAYVPGVGAKEL 184 Query: 181 TAVCQLAADHAVPTFTHVAYMSRIDPESAAEAYIRLIGYAGATGAHMHICHFNSSSKTDI 240 +C LA H VPT+TH+AY S IDP S+ EAY RLIGYAGATGAHMHICHFNS+S DI Sbjct: 185 VDLCTLAKRHEVPTYTHIAYSSNIDPRSSIEAYTRLIGYAGATGAHMHICHFNSTSLLDI 244 Query: 241 ERCVALIAKAQAQGLPITVEAYPYGTGSTVLAATFFSDPKFEERNGLGYDSVQRVTDGHR 300 + L++ AQ QGL ITVEAYPYGTGSTV+ + F + F ER G Y ++QRV DGHR Sbjct: 245 RQAAELVSTAQKQGLNITVEAYPYGTGSTVIGSPLFGEAAFRERTGSPYTAIQRVDDGHR 304 Query: 301 FGSREELLAAQAEEPSTLVLWHVLDIENNAHHRDLLDMAVLYPGGAIASDAMPWTLSDGR 360 F SREE+L Q E P TLVLWH LD+E++ +DLLD++VLYPGG IASDAMPWTL DG Sbjct: 305 FESREEVLDVQRERPDTLVLWHFLDVESDPSAQDLLDVSVLYPGGVIASDAMPWTLPDGS 364 Query: 361 PYTG 364 Y G Sbjct: 365 VYEG 368 >ref|YP_004866874.1| D-glutamate deacylase [Gluconacetobacter xylinus NBRC 3288] dbj|BAK82504.1| D-glutamate deacylase [Gluconacetobacter xylinus NBRC 3288] Length = 496 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 218/367 (59%), Positives = 276/367 (75%), Gaps = 1/367 (0%) Query: 1 VISGGRVVDPASGMDAIGDVAVVDGKIAAVGTGLGGAERQIDATGLVVAPGFIDLHAHGQ 60 V+ GR++DP + +D IGDVA+ + I VG G +R+IDATGLV+APGFID+HAHGQ Sbjct: 5 VLRNGRLIDPETRLDVIGDVAINNSAIVQVGKVDGTGQREIDATGLVIAPGFIDIHAHGQ 64 Query: 61 TIPADRMQAFDGVTTSLDLEAGVLPVASWYKRQAEKGRVLNYGAAANWAFARIGAMTGSN 120 ++ ADRMQAFDGVTT+L+ E G LPV WY++QA+ R+LNYG + +W ARI MT + Sbjct: 65 SLAADRMQAFDGVTTTLEFEIGSLPVGLWYEQQAQTTRLLNYGISVSWVAARIAVMTEQD 124 Query: 121 -SESSLESFGAAMRDRRWIENVATEGEVGGILDRLAIGLNEGGIGIGILNAYAPGAGVQE 179 + L G ++ DRRW+++VAT+ +VG I + GL EGGIGIGI NAY PGAGV+E Sbjct: 125 INHPPLTLMGRSIGDRRWVDDVATDAQVGAITAMMEQGLREGGIGIGIPNAYLPGAGVKE 184 Query: 180 LTAVCQLAADHAVPTFTHVAYMSRIDPESAAEAYIRLIGYAGATGAHMHICHFNSSSKTD 239 ++ +C LAA + VPT+TH+++ S IDP S+ EAY RLIGYAG+TGAHMHICHFNS+S D Sbjct: 185 VSQICSLAARYDVPTYTHISFSSNIDPRSSVEAYTRLIGYAGSTGAHMHICHFNSTSLMD 244 Query: 240 IERCVALIAKAQAQGLPITVEAYPYGTGSTVLAATFFSDPKFEERNGLGYDSVQRVTDGH 299 IERC L+ AQAQGL ITVEAYPYGT STV+ A FF+DP F +R G GYD++QR+ +G Sbjct: 245 IERCAELVRNAQAQGLRITVEAYPYGTASTVIGAPFFADPAFPQRTGQGYDALQRLDNGQ 304 Query: 300 RFGSREELLAAQAEEPSTLVLWHVLDIENNAHHRDLLDMAVLYPGGAIASDAMPWTLSDG 359 SRE++L A AE+ LVLWH LD+E+N HRDLLDM+VLYPGG IASDAMPWT+ DG Sbjct: 305 HMTSREDVLRASAEKADNLVLWHFLDVESNQRHRDLLDMSVLYPGGIIASDAMPWTMPDG 364 Query: 360 RPYTGDA 366 Y GDA Sbjct: 365 STYMGDA 371