BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0104.0015.p         (75 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_768147.1| 50S ribosomal protein L31 [Bradyrhizobium japon...   150   9e-35
ref|YP_001242736.1| 50S ribosomal protein L31 [Bradyrhizobium sp...   149   2e-34
ref|ZP_07027344.1| ribosomal protein L31 [Afipia sp. 1NLS2] >gi|...   148   3e-34
ref|ZP_08628319.1| LSU ribosomal protein L31p [Bradyrhizobiaceae...   147   5e-34
ref|YP_578734.1| 50S ribosomal protein L31 [Nitrobacter hamburge...   147   6e-34

>ref|NP_768147.1| 50S ribosomal protein L31 [Bradyrhizobium japonicum USDA 110]
 sp|Q89UB0.1|RL31_BRAJA RecName: Full=50S ribosomal protein L31
 dbj|BAC46772.1| 50S ribosomal protein L31 [Bradyrhizobium japonicum USDA 110]
          Length = 75

 Score =  150 bits (378), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 70/75 (93%), Positives = 73/75 (97%)

Query: 1  MKADIHPNYHTIKVVMTDGTEYLTRSTWGKEGDTLNLDIDPKSHPAWTGGTQQLMDRGGR 60
          MKA+IHP+YHTIKVVMTDGTEYLTRSTWGKEGDTLNLDIDPKSHPAWTGG  Q+MDRGGR
Sbjct: 1  MKAEIHPDYHTIKVVMTDGTEYLTRSTWGKEGDTLNLDIDPKSHPAWTGGNAQIMDRGGR 60

Query: 61 VSRFQKKFSGFLKKD 75
          VSRFQKKFSGFLKKD
Sbjct: 61 VSRFQKKFSGFLKKD 75


>ref|YP_001242736.1| 50S ribosomal protein L31 [Bradyrhizobium sp. BTAi1]
 sp|A5ERN6.1|RL31_BRASB RecName: Full=50S ribosomal protein L31
 gb|ABQ38830.1| LSU ribosomal protein L31P [Bradyrhizobium sp. BTAi1]
          Length = 75

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 70/75 (93%), Positives = 71/75 (94%)

Query: 1  MKADIHPNYHTIKVVMTDGTEYLTRSTWGKEGDTLNLDIDPKSHPAWTGGTQQLMDRGGR 60
          MKADIHPNYHTI VVMTDGTEY TRSTWGKEGD LNLDIDPKSHPAWTGGTQQ+MDRGGR
Sbjct: 1  MKADIHPNYHTITVVMTDGTEYQTRSTWGKEGDKLNLDIDPKSHPAWTGGTQQIMDRGGR 60

Query: 61 VSRFQKKFSGFLKKD 75
          VSRFQKKF GFLKKD
Sbjct: 61 VSRFQKKFQGFLKKD 75


>ref|ZP_07027344.1| ribosomal protein L31 [Afipia sp. 1NLS2]
 gb|EFI51100.1| ribosomal protein L31 [Afipia sp. 1NLS2]
          Length = 75

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 69/75 (92%), Positives = 74/75 (98%)

Query: 1  MKADIHPNYHTIKVVMTDGTEYLTRSTWGKEGDTLNLDIDPKSHPAWTGGTQQLMDRGGR 60
          MKA+IHP+YHTIKVVMTDGTEYLTRST+GKEGDTLNLDID KSHPAWTGGTQQ++DRGGR
Sbjct: 1  MKAEIHPDYHTIKVVMTDGTEYLTRSTYGKEGDTLNLDIDSKSHPAWTGGTQQILDRGGR 60

Query: 61 VSRFQKKFSGFLKKD 75
          VSRFQKKFSGFLKKD
Sbjct: 61 VSRFQKKFSGFLKKD 75


>ref|ZP_08628319.1| LSU ribosomal protein L31p [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP09228.1| LSU ribosomal protein L31p [Bradyrhizobiaceae bacterium SG-6C]
          Length = 109

 Score =  147 bits (371), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 69/75 (92%), Positives = 74/75 (98%)

Query: 1   MKADIHPNYHTIKVVMTDGTEYLTRSTWGKEGDTLNLDIDPKSHPAWTGGTQQLMDRGGR 60
           MKA+IHP+YHTIKVVMTDGTEYLTRST+GKEGDTLNLDID KSHPAWTGGTQQ++DRGGR
Sbjct: 35  MKAEIHPDYHTIKVVMTDGTEYLTRSTYGKEGDTLNLDIDSKSHPAWTGGTQQILDRGGR 94

Query: 61  VSRFQKKFSGFLKKD 75
           VSRFQKKFSGFLKKD
Sbjct: 95  VSRFQKKFSGFLKKD 109


>ref|YP_578734.1| 50S ribosomal protein L31 [Nitrobacter hamburgensis X14]
 sp|Q1QHM3.1|RL31_NITHX RecName: Full=50S ribosomal protein L31
 gb|ABE64274.1| LSU ribosomal protein L31P [Nitrobacter hamburgensis X14]
          Length = 75

 Score =  147 bits (370), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 68/75 (90%), Positives = 74/75 (98%)

Query: 1  MKADIHPNYHTIKVVMTDGTEYLTRSTWGKEGDTLNLDIDPKSHPAWTGGTQQLMDRGGR 60
          MKA+IHP+YHTIKVVMTDGTEY+TRSTWGK+GDTLNLDID KSHPAWTGG+QQL+DRGGR
Sbjct: 1  MKAEIHPDYHTIKVVMTDGTEYMTRSTWGKDGDTLNLDIDSKSHPAWTGGSQQLLDRGGR 60

Query: 61 VSRFQKKFSGFLKKD 75
          VSRFQKKFSGFLKKD
Sbjct: 61 VSRFQKKFSGFLKKD 75