BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0104.0008.p (208 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002543902.1| transcriptional regulator [Agrobacterium rad... 295 3e-78 ref|YP_002490250.1| FMN-binding negative transcriptional regulat... 285 4e-75 emb|CAD31526.1| PUTATIVE TRANSCRIPTIONAL REGULATOR PROTEIN [Meso... 281 5e-74 ref|NP_106724.1| transcriptional regulator [Mesorhizobium loti M... 281 6e-74 ref|YP_004144943.1| negative transcriptional regulator [Mesorhiz... 276 2e-72 >ref|YP_002543902.1| transcriptional regulator [Agrobacterium radiobacter K84] gb|ACM25976.1| transcriptional regulator [Agrobacterium radiobacter K84] Length = 210 Score = 295 bits (755), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 140/206 (67%), Positives = 164/206 (79%) Query: 1 MYLPPHFKIDELGPIHAAMRAAKLATLVTATADGLIATPLPLILDENEGDCGTLYGHVAR 60 MY+PP F+ D+ +HA +R A+L VTATADGL++TPLPL LD +EG+ GTLYGH+AR Sbjct: 1 MYVPPAFREDDPAELHAMVRDARLCNFVTATADGLLSTPLPLFLDPSEGEHGTLYGHLAR 60 Query: 61 PNPQWKLPAVGEAMAIFMGPDAYVTPSWYATKAEHGKVVPTWNYLAVHAYGSAEFFEDAD 120 NPQWK P +GEA+AIFMGPDAYV+PSWYATK EHGKVVPTWNY AVHAYG EFFEDAD Sbjct: 61 ANPQWKTPVIGEALAIFMGPDAYVSPSWYATKREHGKVVPTWNYAAVHAYGPVEFFEDAD 120 Query: 121 RLRDVVTRLTELHEKSRQEAWQVSDAPDDFIKAQLRGIVGFRMPITRIDAKKKMSQNRKL 180 RL +VV+RLT L+E R W V+DAP+ FIKAQLRGIVG R+PI RI+ K+KMSQNR Sbjct: 121 RLLEVVSRLTNLYEGPRAGPWAVTDAPEPFIKAQLRGIVGLRLPIGRIEGKRKMSQNRSA 180 Query: 181 EDRAGVIAGLGASDDPVDREVAAMIP 206 DRAGV GLG SD P +R VA +IP Sbjct: 181 ADRAGVAEGLGKSDRPANRLVAGLIP 206 >ref|YP_002490250.1| FMN-binding negative transcriptional regulator [Methylobacterium nodulans ORS 2060] gb|ACL63083.1| FMN-binding negative transcriptional regulator [Methylobacterium nodulans ORS 2060] Length = 207 Score = 285 bits (728), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 135/206 (65%), Positives = 161/206 (78%) Query: 1 MYLPPHFKIDELGPIHAAMRAAKLATLVTATADGLIATPLPLILDENEGDCGTLYGHVAR 60 MY PP F+ D+ + A MRAA+LA LVTATADG + TPLPL LDE+EG+ G +YGH+A+ Sbjct: 1 MYTPPAFRDDDPESLRATMRAARLANLVTATADGPLVTPLPLFLDESEGEHGVIYGHLAK 60 Query: 61 PNPQWKLPAVGEAMAIFMGPDAYVTPSWYATKAEHGKVVPTWNYLAVHAYGSAEFFEDAD 120 NPQW++P VGE +AIFMGPDAYVTP+WYATK E GKVVPTWNY+ VHA+G EFF DAD Sbjct: 61 ANPQWRVPPVGEGLAIFMGPDAYVTPAWYATKEETGKVVPTWNYVTVHAHGPIEFFHDAD 120 Query: 121 RLRDVVTRLTELHEKSRQEAWQVSDAPDDFIKAQLRGIVGFRMPITRIDAKKKMSQNRKL 180 RL D VTRLT LHE R + W VS+AP +FI AQLRGIVG RMPI+R++ K+K+SQNR Sbjct: 121 RLLDAVTRLTNLHEGPRAKPWAVSEAPAEFIAAQLRGIVGLRMPISRLEGKRKLSQNRNA 180 Query: 181 EDRAGVIAGLGASDDPVDREVAAMIP 206 DRAGV AGL S+ DREVA +IP Sbjct: 181 TDRAGVAAGLATSERASDREVAPLIP 206 >emb|CAD31526.1| PUTATIVE TRANSCRIPTIONAL REGULATOR PROTEIN [Mesorhizobium loti R7A] Length = 207 Score = 281 bits (719), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 134/206 (65%), Positives = 162/206 (78%) Query: 1 MYLPPHFKIDELGPIHAAMRAAKLATLVTATADGLIATPLPLILDENEGDCGTLYGHVAR 60 MY+PP F+ D+ + A +RAA LA VT TA+G +ATPLPL L+ENEG+ G +YGH+A+ Sbjct: 1 MYIPPAFRDDDKECLRATIRAALLANFVTVTAEGPLATPLPLFLNENEGEHGVIYGHLAK 60 Query: 61 PNPQWKLPAVGEAMAIFMGPDAYVTPSWYATKAEHGKVVPTWNYLAVHAYGSAEFFEDAD 120 NPQ ++P +G+ +AIFMGPDAYVTP+WYATK E GKVVPTWNY+AVHAYG EFFEDA Sbjct: 61 ANPQCRVPPLGDGLAIFMGPDAYVTPAWYATKRETGKVVPTWNYVAVHAYGPVEFFEDAG 120 Query: 121 RLRDVVTRLTELHEKSRQEAWQVSDAPDDFIKAQLRGIVGFRMPITRIDAKKKMSQNRKL 180 RL DVV RLT+ HE R W VSDAP DF++AQLRGIVG RMPITR++ K+KMSQNR Sbjct: 121 RLLDVVNRLTDHHEGERASPWAVSDAPPDFVQAQLRGIVGLRMPITRLEGKRKMSQNRNA 180 Query: 181 EDRAGVIAGLGASDDPVDREVAAMIP 206 DRAGV AGL AS+ DR+VAA+IP Sbjct: 181 ADRAGVAAGLAASERASDRDVAALIP 206 >ref|NP_106724.1| transcriptional regulator [Mesorhizobium loti MAFF303099] dbj|BAB52510.1| transcriptional regulator [Mesorhizobium loti MAFF303099] Length = 207 Score = 281 bits (718), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 135/206 (65%), Positives = 162/206 (78%) Query: 1 MYLPPHFKIDELGPIHAAMRAAKLATLVTATADGLIATPLPLILDENEGDCGTLYGHVAR 60 MY+PP F+ D+ + A +RAA LA VT TA+G +ATPLPL LDE+EG+ G +YGH+A+ Sbjct: 1 MYIPPAFRDDDKECLRATIRAALLANFVTVTAEGPLATPLPLFLDESEGEHGVIYGHLAK 60 Query: 61 PNPQWKLPAVGEAMAIFMGPDAYVTPSWYATKAEHGKVVPTWNYLAVHAYGSAEFFEDAD 120 NPQ ++P +G+ +AIFMGPDAYVTP+WYATK E GKVVPTWNY+AVHAYG EFFEDA Sbjct: 61 ANPQCRVPPLGDGLAIFMGPDAYVTPAWYATKRETGKVVPTWNYVAVHAYGPVEFFEDAG 120 Query: 121 RLRDVVTRLTELHEKSRQEAWQVSDAPDDFIKAQLRGIVGFRMPITRIDAKKKMSQNRKL 180 RL DVV RLT+ HE R W VSDAP DFI+AQLRGIVG RMPITR++ K+KMSQNR Sbjct: 121 RLLDVVNRLTDHHEGERASPWAVSDAPPDFIQAQLRGIVGLRMPITRLEGKRKMSQNRNA 180 Query: 181 EDRAGVIAGLGASDDPVDREVAAMIP 206 DRAGV AGL AS+ DR+VAA+IP Sbjct: 181 ADRAGVAAGLAASERASDRDVAALIP 206 >ref|YP_004144943.1| negative transcriptional regulator [Mesorhizobium ciceri biovar biserrulae WSM1271] ref|YP_004614874.1| FMN-binding negative transcriptional regulator [Mesorhizobium opportunistum WSM2075] gb|ADV14893.1| Negative transcriptional regulator [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|AEH90780.1| FMN-binding negative transcriptional regulator [Mesorhizobium opportunistum WSM2075] Length = 206 Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 129/206 (62%), Positives = 160/206 (77%) Query: 1 MYLPPHFKIDELGPIHAAMRAAKLATLVTATADGLIATPLPLILDENEGDCGTLYGHVAR 60 MY PP F+ D++ + A++RA+ LA VTATA+GL A+PLPL+LDE+EG+ G +YGH+A+ Sbjct: 1 MYTPPAFRDDDMDFLRASVRASPLANFVTATAEGLFASPLPLLLDESEGEHGVIYGHLAK 60 Query: 61 PNPQWKLPAVGEAMAIFMGPDAYVTPSWYATKAEHGKVVPTWNYLAVHAYGSAEFFEDAD 120 NPQ ++P +G+ +AIFMGP+AYVTP+WYATK E GKVVPTWNY+ VHAYG EFFED Sbjct: 61 ANPQCRVPPLGDGLAIFMGPEAYVTPAWYATKQETGKVVPTWNYVTVHAYGPVEFFEDTG 120 Query: 121 RLRDVVTRLTELHEKSRQEAWQVSDAPDDFIKAQLRGIVGFRMPITRIDAKKKMSQNRKL 180 RL + V RLT+ HE R W VSDAP DF++AQLRGIVG RM ITRI+ K+KMSQNR Sbjct: 121 RLLEAVNRLTDHHEGERVSPWAVSDAPSDFVQAQLRGIVGLRMSITRIEGKRKMSQNRNA 180 Query: 181 EDRAGVIAGLGASDDPVDREVAAMIP 206 DRAGV AGL AS+ DREVA+ IP Sbjct: 181 ADRAGVAAGLAASERASDREVASFIP 206