BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0103.0014.p (173 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766643.1| hypothetical protein blr0003 [Bradyrhizobium ja... 342 1e-92 ref|NP_771339.1| outer-membrane protein [Bradyrhizobium japonicu... 223 8e-57 ref|YP_004109008.1| putative outer-membrane protein precursor [R... 195 3e-48 ref|NP_948158.1| outer membrane protein [Rhodopseudomonas palust... 192 1e-47 ref|NP_771507.1| outer-membrane immunogenic protein [Bradyrhizob... 192 1e-47 >ref|NP_766643.1| hypothetical protein blr0003 [Bradyrhizobium japonicum USDA 110] dbj|BAC45268.1| blr0003 [Bradyrhizobium japonicum USDA 110] Length = 197 Score = 342 bits (878), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 173/173 (100%), Positives = 173/173 (100%) Query: 1 VGGHIGYRWQIANSVFGLETQGNWADFKGSNANLAFAGVRDDSTLDAFGLFTGQVGYAWN 60 VGGHIGYRWQIANSVFGLETQGNWADFKGSNANLAFAGVRDDSTLDAFGLFTGQVGYAWN Sbjct: 25 VGGHIGYRWQIANSVFGLETQGNWADFKGSNANLAFAGVRDDSTLDAFGLFTGQVGYAWN 84 Query: 61 NVLLYVRGGAAVVRDKYRVSDFATGLTIDNGSETRWGGTVGAGLEFGFAPNWSIGVEYDH 120 NVLLYVRGGAAVVRDKYRVSDFATGLTIDNGSETRWGGTVGAGLEFGFAPNWSIGVEYDH Sbjct: 85 NVLLYVRGGAAVVRDKYRVSDFATGLTIDNGSETRWGGTVGAGLEFGFAPNWSIGVEYDH 144 Query: 121 LFMGRRDVDFFFSPGLVGVPVGTFAGTARIGQDVDIGLVRVNYRWGGVIATTY 173 LFMGRRDVDFFFSPGLVGVPVGTFAGTARIGQDVDIGLVRVNYRWGGVIATTY Sbjct: 145 LFMGRRDVDFFFSPGLVGVPVGTFAGTARIGQDVDIGLVRVNYRWGGVIATTY 197 >ref|NP_771339.1| outer-membrane protein [Bradyrhizobium japonicum USDA 110] dbj|BAC49964.1| blr4699 [Bradyrhizobium japonicum USDA 110] Length = 259 Score = 223 bits (568), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 113/169 (66%), Positives = 126/169 (74%), Gaps = 2/169 (1%) Query: 7 YRWQIANSVFGLETQGNWADFKGSNANLAF--AGVRDDSTLDAFGLFTGQVGYAWNNVLL 64 YRWQ AN VFGLE QGNWADF G N + F G+RD S ++AFGLFTGQVGYAWNNVL Sbjct: 91 YRWQSANWVFGLEGQGNWADFSGDNVSTTFIGTGLRDRSKINAFGLFTGQVGYAWNNVLF 150 Query: 65 YVRGGAAVVRDKYRVSDFATGLTIDNGSETRWGGTVGAGLEFGFAPNWSIGVEYDHLFMG 124 YV+GG AVV D+YR D TGL D +ETRWGGTVGAGLEFGFAPNW++GVEYDH+FMG Sbjct: 151 YVKGGGAVVSDRYRGYDVITGLEFDRANETRWGGTVGAGLEFGFAPNWTVGVEYDHIFMG 210 Query: 125 RRDVDFFFSPGLVGVPVGTFAGTARIGQDVDIGLVRVNYRWGGVIATTY 173 R + F S V P G F + RIGQDVDIGLVRVNYRWGG + Y Sbjct: 211 NRTIGFAGSGNFVVAPAGAFTRSERIGQDVDIGLVRVNYRWGGPVIAKY 259 >ref|YP_004109008.1| putative outer-membrane protein precursor [Rhodopseudomonas palustris DX-1] gb|ADU44275.1| putative outer-membrane protein precursor [Rhodopseudomonas palustris DX-1] Length = 246 Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 102/176 (57%), Positives = 115/176 (65%), Gaps = 17/176 (9%) Query: 1 VGGHIGYRWQIANSVFGLETQGNWADFKGSNANLAFAGVRDDSTLDAFGLFTGQVGYAWN 60 VGG IGY WQ+ VFG+E QGNWADFKGSNA+L F ++S +DAFGLFT +VGYAWN Sbjct: 85 VGGQIGYNWQVGTWVFGVEAQGNWADFKGSNASLRFTDTTNESKVDAFGLFTARVGYAWN 144 Query: 61 NVLLYVRGGAAVVRDKYRVSDFATGLTIDNGSETRWGGTVGAGLEFGFAPNWSIGVEYDH 120 N LLYV+GGAAV DKY G ID+ SETRWG VG GLE+GF PNWS VEYDH Sbjct: 145 NALLYVKGGAAVTSDKYTTYRTLAGTIIDDASETRWGAAVGGGLEYGFTPNWSFAVEYDH 204 Query: 121 LFMGRRDVDFFFSPGLVGVPVGTFAGTA---RIGQDVDIGLVRVNYRWGGVIATTY 173 LFMG RD+ TFA T I QDVD+ R+NYRWGG I Y Sbjct: 205 LFMGGRDL--------------TFAPTTNVDHIKQDVDVVTARINYRWGGPIVARY 246 >ref|NP_948158.1| outer membrane protein [Rhodopseudomonas palustris CGA009] emb|CAE28257.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009] Length = 288 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 101/174 (58%), Positives = 120/174 (68%), Gaps = 9/174 (5%) Query: 2 GGHIGYRWQIANSVFGLETQGNWADFKGSNANLAF--AGVRDDSTLDAFGLFTGQVGYAW 59 GG +GY WQI+ VFG+E QGNWADFKGSNANL A + + +DAFGLFT +VGYAW Sbjct: 122 GGQVGYNWQISTWVFGVEAQGNWADFKGSNANLLVIPAPTTNQTKIDAFGLFTARVGYAW 181 Query: 60 NNVLLYVRGGAAVVRDKYRVSDFATGLTIDNGSETRWGGTVGAGLEFGFAPNWSIGVEYD 119 NN L+YV+GGAAV DKY ATG+ D+ SETRWG TVG GLE+GF P+WS VEYD Sbjct: 182 NNALIYVKGGAAVTSDKYTRFRTATGVFNDDASETRWGATVGTGLEYGFTPSWSFAVEYD 241 Query: 120 HLFMGRRDVDFFFSPGLVGVPVGTFAGTARIGQDVDIGLVRVNYRWGGVIATTY 173 HLF+G RD+ FSP L V + + I QDVD+ R+NYRWGG I Y Sbjct: 242 HLFLGGRDLT--FSPVLPNV-----SNVSHIKQDVDVVTARINYRWGGPIVARY 288 >ref|NP_771507.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] dbj|BAC50132.1| bll4867 [Bradyrhizobium japonicum USDA 110] Length = 258 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 101/173 (58%), Positives = 122/173 (70%), Gaps = 12/173 (6%) Query: 1 VGGHIGYRWQIANSVFGLETQGNWADFKGSNANLAFAGVRDDSTLDAFGLFTGQVGYAWN 60 VGG IGYRWQ VFG+E QGNWADF G N + FA R+ S +D+FGL TGQVGYAWN Sbjct: 98 VGGQIGYRWQSGQWVFGVEGQGNWADFSGDNVSALFA-TRNRSKIDSFGLITGQVGYAWN 156 Query: 61 NVLLYVRGGAAVVRDKYRVSDFATGLTIDNGSETRWGGTVGAGLEFGFAPNWSIGVEYDH 120 NVL+YV+GGAAV KY V A+G + + +TRWGGTVGAGLE+GFAPNWS+GVEY+H Sbjct: 157 NVLIYVKGGAAVAGTKYEVFSTASGALLSSNDQTRWGGTVGAGLEYGFAPNWSVGVEYNH 216 Query: 121 LFMGRRDVDFFFSPGLVGVPVGTFAGTARIGQDVDIGLVRVNYRWGGVIATTY 173 +F+ +DV F AGT RI QDVD+GLVR+NY++GG I Y Sbjct: 217 IFLQDKDVTF-----------AGLAGTDRIRQDVDMGLVRLNYKFGGPIIGRY 258