BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0102.0007.p         (137 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767209.1| hypothetical protein blr0569 [Bradyrhizobium ja...   268   3e-70
ref|YP_575909.1| hypothetical protein Nham_0559 [Nitrobacter ham...   261   2e-68
ref|ZP_01044679.1| hypothetical protein NB311A_04094 [Nitrobacte...   253   7e-66
ref|YP_317087.1| hypothetical protein Nwi_0468 [Nitrobacter wino...   249   1e-64
ref|YP_001236490.1| hypothetical protein BBta_0291 [Bradyrhizobi...   248   2e-64

>ref|NP_767209.1| hypothetical protein blr0569 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC45834.1| blr0569 [Bradyrhizobium japonicum USDA 110]
          Length = 148

 Score =  268 bits (684), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 128/137 (93%), Positives = 133/137 (97%)

Query: 1   MNYWLVKSEPSVWSWDHQVAKGAKGEAWTGVRNFTARQNLVNMKKGDKAFFYHSNEGKEI 60
           MNYWLVKSEPSVWSWD QVAKGAKGEAWTGVRN+TARQNLV MKKGDKAFFYHSNEGKEI
Sbjct: 12  MNYWLVKSEPSVWSWDQQVAKGAKGEAWTGVRNYTARQNLVAMKKGDKAFFYHSNEGKEI 71

Query: 61  VGIAEIINEAYPDPTDKTGKFVCVDIKADKPLKTPVTMAAIKADKKLADMALVKYSRLSV 120
           VGIAEI+ EAYPDPTDKT KFVCVDIKADKPLKTPVTMAAIKA+KKLADMALVKYSRLSV
Sbjct: 72  VGIAEIVKEAYPDPTDKTEKFVCVDIKADKPLKTPVTMAAIKAEKKLADMALVKYSRLSV 131

Query: 121 QPVTAEEWKMVCKMGGL 137
           QPVTAEEWK+VCKMGG+
Sbjct: 132 QPVTAEEWKLVCKMGGM 148


>ref|YP_575909.1| hypothetical protein Nham_0559 [Nitrobacter hamburgensis X14]
 gb|ABE61449.1| protein of unknown function DUF589 [Nitrobacter hamburgensis X14]
          Length = 137

 Score =  261 bits (668), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 124/137 (90%), Positives = 129/137 (94%)

Query: 1   MNYWLVKSEPSVWSWDHQVAKGAKGEAWTGVRNFTARQNLVNMKKGDKAFFYHSNEGKEI 60
           M YWLVKSEPS WSW  QVAKGAKGEAWTGVRNFTARQNLV MKKGD+AFFYHSNEGKEI
Sbjct: 1   MAYWLVKSEPSAWSWQQQVAKGAKGEAWTGVRNFTARQNLVAMKKGDQAFFYHSNEGKEI 60

Query: 61  VGIAEIINEAYPDPTDKTGKFVCVDIKADKPLKTPVTMAAIKADKKLADMALVKYSRLSV 120
           VGIAEII EAYPDPTDKTG+FVCVDIKADKPLKTPVT+AA+KADK+LADMALVKYSRLSV
Sbjct: 61  VGIAEIIREAYPDPTDKTGRFVCVDIKADKPLKTPVTIAAVKADKRLADMALVKYSRLSV 120

Query: 121 QPVTAEEWKMVCKMGGL 137
           QPVT  EWKMVCKMGGL
Sbjct: 121 QPVTPAEWKMVCKMGGL 137


>ref|ZP_01044679.1| hypothetical protein NB311A_04094 [Nitrobacter sp. Nb-311A]
 gb|EAQ37460.1| hypothetical protein NB311A_04094 [Nitrobacter sp. Nb-311A]
          Length = 137

 Score =  253 bits (646), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 119/137 (86%), Positives = 127/137 (92%)

Query: 1   MNYWLVKSEPSVWSWDHQVAKGAKGEAWTGVRNFTARQNLVNMKKGDKAFFYHSNEGKEI 60
           M YWLVKSEPS WSW+ QVAKGAKGE WTGVRNFTARQNL  MKKGD AFFYHSNEGKEI
Sbjct: 1   MAYWLVKSEPSAWSWEQQVAKGAKGEPWTGVRNFTARQNLAAMKKGDLAFFYHSNEGKEI 60

Query: 61  VGIAEIINEAYPDPTDKTGKFVCVDIKADKPLKTPVTMAAIKADKKLADMALVKYSRLSV 120
           VGIAEII EAYPDPTDKTGKFVCVDIKA+KPLKTPVT+AA+KAD++LADMALVKYSRLSV
Sbjct: 61  VGIAEIIREAYPDPTDKTGKFVCVDIKANKPLKTPVTIAAVKADERLADMALVKYSRLSV 120

Query: 121 QPVTAEEWKMVCKMGGL 137
           QPVT  EWK++CKMGGL
Sbjct: 121 QPVTPAEWKLICKMGGL 137


>ref|YP_317087.1| hypothetical protein Nwi_0468 [Nitrobacter winogradskyi Nb-255]
 gb|ABA03735.1| Protein of unknown function DUF589 [Nitrobacter winogradskyi
           Nb-255]
          Length = 137

 Score =  249 bits (636), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 117/137 (85%), Positives = 126/137 (91%)

Query: 1   MNYWLVKSEPSVWSWDHQVAKGAKGEAWTGVRNFTARQNLVNMKKGDKAFFYHSNEGKEI 60
           M YWLVKSEPS WSW+ QVAKGAKGE WTGVRNFTARQNL  MKKGD AFFYHSNEGKEI
Sbjct: 1   MAYWLVKSEPSAWSWEQQVAKGAKGEPWTGVRNFTARQNLNAMKKGDLAFFYHSNEGKEI 60

Query: 61  VGIAEIINEAYPDPTDKTGKFVCVDIKADKPLKTPVTMAAIKADKKLADMALVKYSRLSV 120
           VGIAEII EAYPDPTDKTG+FVCVDIKA KPLKTPVT+AA+KAD++LAD+ALVKYSRLSV
Sbjct: 61  VGIAEIIREAYPDPTDKTGRFVCVDIKASKPLKTPVTIAAVKADRRLADIALVKYSRLSV 120

Query: 121 QPVTAEEWKMVCKMGGL 137
           QPVT  EWK+VC+MGGL
Sbjct: 121 QPVTPAEWKLVCEMGGL 137


>ref|YP_001236490.1| hypothetical protein BBta_0291 [Bradyrhizobium sp. BTAi1]
 gb|ABQ32584.1| hypothetical protein BBta_0291 [Bradyrhizobium sp. BTAi1]
          Length = 137

 Score =  248 bits (634), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 118/137 (86%), Positives = 127/137 (92%)

Query: 1   MNYWLVKSEPSVWSWDHQVAKGAKGEAWTGVRNFTARQNLVNMKKGDKAFFYHSNEGKEI 60
           M+YWLVKSEPSVWSWD QV KGAKGEAWTGVRN+TARQNLV MKKG+ AF+YHSNEGKEI
Sbjct: 1   MSYWLVKSEPSVWSWDQQVEKGAKGEAWTGVRNYTARQNLVAMKKGELAFYYHSNEGKEI 60

Query: 61  VGIAEIINEAYPDPTDKTGKFVCVDIKADKPLKTPVTMAAIKADKKLADMALVKYSRLSV 120
           VGIAEII EAYPDPTDKTGKFVCVDIKA KP KTPVT+AAIKA+ KLA+MALVK SRLSV
Sbjct: 61  VGIAEIIKEAYPDPTDKTGKFVCVDIKAHKPFKTPVTLAAIKAEPKLAEMALVKQSRLSV 120

Query: 121 QPVTAEEWKMVCKMGGL 137
           QPVT EEWK+VCKMGG+
Sbjct: 121 QPVTPEEWKLVCKMGGV 137