BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0102.0004.p (175 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767214.1| hypothetical protein blr0574 [Bradyrhizobium ja... 288 3e-76 ref|YP_001202544.1| hypothetical protein BRADO0342 [Bradyrhizobi... 265 2e-69 ref|YP_001236529.1| hypothetical protein BBta_0331 [Bradyrhizobi... 258 2e-67 ref|NP_945565.1| ErfK/YbiS/YcfS/YnhG protein [Rhodopseudomonas p... 251 3e-65 ref|YP_529958.1| hypothetical protein RPC_0060 [Rhodopseudomonas... 250 6e-65 >ref|NP_767214.1| hypothetical protein blr0574 [Bradyrhizobium japonicum USDA 110] dbj|BAC45839.1| blr0574 [Bradyrhizobium japonicum USDA 110] Length = 171 Score = 288 bits (736), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 137/160 (85%), Positives = 147/160 (91%) Query: 5 MSMKFAVALAATLGAVVVMSQTAEARPEMVGIHADNYEPGTIVVKTNERRLYLILDSGHA 64 M+M+ AVALAAT+GA ++MS AEARPEMVG H +Y PGTIVVKTNERRLYLILD GHA Sbjct: 1 MAMRIAVALAATIGAGILMSTAAEARPEMVGTHLADYSPGTIVVKTNERRLYLILDDGHA 60 Query: 65 MRYPVGVGKSGKQWAGTTKIDGKYRNPAWSPPAEVKRDKPSIPNVIAGGSPHNPMGVAAM 124 +RYPVGVGKSGKQWAGTT+IDGKYRNPAWSPPAEVKRDKP +P+VI GGSP NPMGVAAM Sbjct: 61 VRYPVGVGKSGKQWAGTTRIDGKYRNPAWSPPAEVKRDKPQLPDVIPGGSPRNPMGVAAM 120 Query: 125 TLAGGEYAIHGTNVPGSVGGFVSYGCIRMLNTDITDLYSR 164 TLAGGEYAIHGTNVPGSVGGFVSYGCIRMLN DITDLYSR Sbjct: 121 TLAGGEYAIHGTNVPGSVGGFVSYGCIRMLNDDITDLYSR 160 >ref|YP_001202544.1| hypothetical protein BRADO0342 [Bradyrhizobium sp. ORS 278] emb|CAL74298.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 153 Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 127/152 (83%), Positives = 139/152 (91%), Gaps = 1/152 (0%) Query: 24 SQTAEARPEMVGIHADNYEPGTIVVKTNERRLYLILDSGHAMRYPVGVGKSGKQWAGTTK 83 S+TA ARPE+VGI D Y PGTIVVKT+ERRLYL+LD HAMRYPVGVGK+G+QWAGTTK Sbjct: 3 SKTACARPELVGIAGD-YSPGTIVVKTSERRLYLVLDGSHAMRYPVGVGKAGRQWAGTTK 61 Query: 84 IDGKYRNPAWSPPAEVKRDKPSIPNVIAGGSPHNPMGVAAMTLAGGEYAIHGTNVPGSVG 143 IDGKY+NPAW+PPA+VKRDKP +P+VIAGGSP NPMGVAAMTLAGGEYAIHGTNVP SVG Sbjct: 62 IDGKYKNPAWAPPADVKRDKPELPDVIAGGSPRNPMGVAAMTLAGGEYAIHGTNVPNSVG 121 Query: 144 GFVSYGCIRMLNTDITDLYSRVEIGTTVVVTR 175 G+VSYGCIRMLN DITDLY RV IGTTVVVTR Sbjct: 122 GYVSYGCIRMLNQDITDLYDRVSIGTTVVVTR 153 >ref|YP_001236529.1| hypothetical protein BBta_0331 [Bradyrhizobium sp. BTAi1] gb|ABQ32623.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 178 Score = 258 bits (660), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 123/149 (82%), Positives = 136/149 (91%), Gaps = 1/149 (0%) Query: 27 AEARPEMVGIHADNYEPGTIVVKTNERRLYLILDSGHAMRYPVGVGKSGKQWAGTTKIDG 86 A ARPE+V + D + PGTIVVKT ER+LYL+LD HAMRYPVGVGK+G+QWAGTTKIDG Sbjct: 31 ASARPELVDMAGD-FSPGTIVVKTGERKLYLVLDGRHAMRYPVGVGKAGRQWAGTTKIDG 89 Query: 87 KYRNPAWSPPAEVKRDKPSIPNVIAGGSPHNPMGVAAMTLAGGEYAIHGTNVPGSVGGFV 146 KY+ PAW+PPAEVKRDKP++P+VIAGGSPHNPMGVAAMTLAGG+YAIHGTNVPGSVGGFV Sbjct: 90 KYKYPAWAPPAEVKRDKPNLPDVIAGGSPHNPMGVAAMTLAGGDYAIHGTNVPGSVGGFV 149 Query: 147 SYGCIRMLNTDITDLYSRVEIGTTVVVTR 175 SYGCIRMLN DITDLY RV IGTTVVVTR Sbjct: 150 SYGCIRMLNADITDLYERVSIGTTVVVTR 178 >ref|NP_945565.1| ErfK/YbiS/YcfS/YnhG protein [Rhodopseudomonas palustris CGA009] ref|YP_001989246.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris TIE-1] emb|CAE25656.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] gb|ACE98770.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris TIE-1] Length = 175 Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 122/172 (70%), Positives = 139/172 (80%), Gaps = 1/172 (0%) Query: 4 LMSMKFAVALAATLGAVVVMSQTAEARPEMVGIHADNYEPGTIVVKTNERRLYLILDSGH 63 S K A+ GA V+ + AEARP++V D Y PGTIVV+T ERRLYL+++ GH Sbjct: 5 FRSAKLAMVAVVLAGASVLTAPRAEARPDLVVFRGD-YSPGTIVVRTGERRLYLVVEPGH 63 Query: 64 AMRYPVGVGKSGKQWAGTTKIDGKYRNPAWSPPAEVKRDKPSIPNVIAGGSPHNPMGVAA 123 A+RYPVGVGK+GKQWAG TKIDGK+RNPAW+PPAEVKRD P+IP+VI GGSP NPMGVAA Sbjct: 64 AVRYPVGVGKAGKQWAGVTKIDGKFRNPAWAPPAEVKRDVPTIPDVIPGGSPANPMGVAA 123 Query: 124 MTLAGGEYAIHGTNVPGSVGGFVSYGCIRMLNTDITDLYSRVEIGTTVVVTR 175 MTLAGGEYAIHGTN P S+GGFVSYGCIRMLN DITDLY RV +GT VVV R Sbjct: 124 MTLAGGEYAIHGTNRPQSIGGFVSYGCIRMLNDDITDLYERVPVGTQVVVMR 175 >ref|YP_529958.1| hypothetical protein RPC_0060 [Rhodopseudomonas palustris BisB18] gb|ABD85639.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18] Length = 171 Score = 250 bits (638), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 121/170 (71%), Positives = 142/170 (83%), Gaps = 1/170 (0%) Query: 5 MSMKFAVALAATLGAVVVMSQTAEARPEMVGIHADNYEPGTIVVKTNERRLYLILDSGHA 64 M+++ ++A+AA +GA ++ S AEARP++V D Y PGTIVVKT+ERRLYLILD A Sbjct: 1 MNLRTSLAIAAVVGAGLLASSRAEARPDVVAYSGD-YSPGTIVVKTHERRLYLILDDRTA 59 Query: 65 MRYPVGVGKSGKQWAGTTKIDGKYRNPAWSPPAEVKRDKPSIPNVIAGGSPHNPMGVAAM 124 +RYPVGVGK GKQWAG TKIDGKYR PAW+PPA+VKRD P+IP+VI GGSP NPMGVAAM Sbjct: 60 VRYPVGVGKVGKQWAGATKIDGKYREPAWAPPADVKRDNPNIPDVIPGGSPANPMGVAAM 119 Query: 125 TLAGGEYAIHGTNVPGSVGGFVSYGCIRMLNTDITDLYSRVEIGTTVVVT 174 TLAGGEYAIHGTN P S+GGFVSYGC+RM N DI+DLY RV +GT VVVT Sbjct: 120 TLAGGEYAIHGTNRPASIGGFVSYGCVRMYNEDISDLYQRVPVGTQVVVT 169