BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0101.0008.p (158 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771840.1| hypothetical protein bll5200 [Bradyrhizobium ja... 202 2e-50 ref|NP_774280.1| hypothetical protein bll7640 [Bradyrhizobium ja... 178 2e-43 ref|YP_579133.1| hypothetical protein Nham_4003 [Nitrobacter ham... 162 1e-38 ref|YP_571681.1| hypothetical protein Nham_4234 [Nitrobacter ham... 160 6e-38 ref|YP_002290452.1| hypothetical protein OCAR_7484 [Oligotropha ... 122 2e-26 >ref|NP_771840.1| hypothetical protein bll5200 [Bradyrhizobium japonicum USDA 110] dbj|BAC50465.1| bll5200 [Bradyrhizobium japonicum USDA 110] Length = 160 Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 117/159 (73%), Positives = 132/159 (83%), Gaps = 4/159 (2%) Query: 3 PIRLSTSSLKEGRWYEYLIRFVLGGAATVFTGLISSRYGAVIGGVFLALPAIFCASATLI 62 PIR S SSLKEGRWYEYLIRF LGG ATVF GL+SSRYGA IGG+FLALPAIFCASATLI Sbjct: 3 PIRFSPSSLKEGRWYEYLIRFALGGTATVFAGLVSSRYGASIGGLFLALPAIFCASATLI 62 Query: 63 EKHEIRRKREAGLAGKRRGQMAAAVDAAGAALGALGMLAFAVGFSMLIPRGNIPAVFVGA 122 EKHEIRRKREAGLAG+RRG+ AAAVD+AGAALGALGMLAFA+ FS L +I A F+GA Sbjct: 63 EKHEIRRKREAGLAGERRGRTAAAVDSAGAALGALGMLAFAMVFS-LTAETSIAAAFIGA 121 Query: 123 SLAWLTVAVAAWYVRRKMRSM---RTVKEPSGSTNSRTR 158 SLAWL +++ AWYVRRK RS+ RT ++ GS R+R Sbjct: 122 SLAWLVISMVAWYVRRKTRSVRRGRTEQKGGGSAIGRSR 160 >ref|NP_774280.1| hypothetical protein bll7640 [Bradyrhizobium japonicum USDA 110] dbj|BAC52905.1| bll7640 [Bradyrhizobium japonicum USDA 110] Length = 154 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 111/155 (71%), Positives = 130/155 (83%), Gaps = 1/155 (0%) Query: 4 IRLSTSSLKEGRWYEYLIRFVLGGAATVFTGLISSRYGAVIGGVFLALPAIFCASATLIE 63 +++S SSL+EG WYEYL+RF LGGAAT FTGLISSRYGA IGG+FLALPAIFCASATLIE Sbjct: 1 MKVSPSSLREGWWYEYLVRFGLGGAATAFTGLISSRYGASIGGLFLALPAIFCASATLIE 60 Query: 64 KHEIRRKREAGLAGKRRGQMAAAVDAAGAALGALGMLAFAVGFSMLIPRGNIPAVFVGAS 123 KHE+RRKREAGL G+RRG+ AAA+DAAGAALGALGMLAFA F L+ R ++ F+GAS Sbjct: 61 KHELRRKREAGLEGRRRGREAAALDAAGAALGALGMLAFAAVFWFLVER-SVAGAFIGAS 119 Query: 124 LAWLTVAVAAWYVRRKMRSMRTVKEPSGSTNSRTR 158 LAWLTVAVAAW+VRR++R R + SG+ SR R Sbjct: 120 LAWLTVAVAAWFVRRQVRLARLAQRDSGTALSRCR 154 >ref|YP_579133.1| hypothetical protein Nham_4003 [Nitrobacter hamburgensis X14] gb|ABE64673.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 144 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 99/141 (70%), Positives = 120/141 (85%), Gaps = 1/141 (0%) Query: 1 VSPIRLSTSSLKEGRWYEYLIRFVLGGAATVFTGLISSRYGAVIGGVFLALPAIFCASAT 60 ++P+R+S SSL+EGR YEYL+RF LGGAATV TGL+SSRYGA +GG+FLALP IFCASAT Sbjct: 1 MTPVRISFSSLREGRPYEYLVRFALGGAATVVTGLVSSRYGASVGGLFLALPVIFCASAT 60 Query: 61 LIEKHEIRRKREAGLAGKRRGQMAAAVDAAGAALGALGMLAFAVGFSMLIPRGNIPAVFV 120 LIEKHEIRRK E GL G+RRGQ AAA+DAAGAALGALGMLAFA+ F +++ + ++ FV Sbjct: 61 LIEKHEIRRKNEEGLDGRRRGQEAAALDAAGAALGALGMLAFALVFCIVV-KASVFVAFV 119 Query: 121 GASLAWLTVAVAAWYVRRKMR 141 AS+AWL VA+AAWY RRK + Sbjct: 120 AASIAWLVVAMAAWYARRKTK 140 >ref|YP_571681.1| hypothetical protein Nham_4234 [Nitrobacter hamburgensis X14] gb|ABE64849.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 144 Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 104/141 (73%), Positives = 121/141 (85%), Gaps = 1/141 (0%) Query: 1 VSPIRLSTSSLKEGRWYEYLIRFVLGGAATVFTGLISSRYGAVIGGVFLALPAIFCASAT 60 ++PIR+S SSL+EGR YEYL+RF LGGAATV TGLISS YGA IGG+FLALPAIFCASAT Sbjct: 1 MTPIRISFSSLREGRPYEYLVRFALGGAATVVTGLISSDYGASIGGLFLALPAIFCASAT 60 Query: 61 LIEKHEIRRKREAGLAGKRRGQMAAAVDAAGAALGALGMLAFAVGFSMLIPRGNIPAVFV 120 LIEKHEIRRK+E GL G RRGQ AAA+DAAGAALGALGMLAFA+ F +++ + +I A FV Sbjct: 61 LIEKHEIRRKKETGLNGCRRGQQAAALDAAGAALGALGMLAFALVFFIVV-KASISAAFV 119 Query: 121 GASLAWLTVAVAAWYVRRKMR 141 AS+AWL V++AAWY RRK R Sbjct: 120 TASIAWLVVSMAAWYARRKTR 140 >ref|YP_002290452.1| hypothetical protein OCAR_7484 [Oligotropha carboxidovorans OM5] ref|YP_004631614.1| hypothetical protein OCA5_c06500 [Oligotropha carboxidovorans OM5] gb|ACI94587.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5] gb|AEI01798.1| hypothetical protein OCA4_c06490 [Oligotropha carboxidovorans OM4] gb|AEI05373.1| hypothetical protein OCA5_c06500 [Oligotropha carboxidovorans OM5] Length = 149 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 87/134 (64%), Positives = 103/134 (76%), Gaps = 1/134 (0%) Query: 4 IRLSTSSLKEGRWYEYLIRFVLGGAATVFTGLISSRYGAVIGGVFLALPAIFCASATLIE 63 I LSTS L RWYEY+IRFVLGGA TVFTG+ISS +GA IGG+FLALPAIFCASATLIE Sbjct: 3 IGLSTSPLANSRWYEYVIRFVLGGAVTVFTGMISSEFGASIGGLFLALPAIFCASATLIE 62 Query: 64 KHEIRRKREAGLAGKRRGQMAAAVDAAGAALGALGMLAFAVGFSMLIPRGNIPAVFVGAS 123 +HEIRRKR+AG G RRG+ AAA+DA GAALG++ M+AFA+ + G A AS Sbjct: 63 RHEIRRKRDAGGEGARRGRGAAALDATGAALGSVAMVAFAIVLLVTTSWGAAAAF-ACAS 121 Query: 124 LAWLTVAVAAWYVR 137 LAW+ +AVA W +R Sbjct: 122 LAWVVIAVAMWVLR 135