BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0101.0004.p         (169 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001205452.1| hypothetical protein BRADO3437 [Bradyrhizobi...   257   4e-67
ref|YP_570338.1| hypothetical protein RPD_3212 [Rhodopseudomonas...   253   5e-66
ref|NP_948648.1| hypothetical protein RPA3309 [Rhodopseudomonas ...   252   1e-65
ref|YP_001992706.1| hypothetical protein Rpal_3731 [Rhodopseudom...   252   1e-65
ref|YP_782575.1| hypothetical protein RPE_3665 [Rhodopseudomonas...   250   6e-65

>ref|YP_001205452.1| hypothetical protein BRADO3437 [Bradyrhizobium sp. ORS 278]
 emb|CAL77225.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 177

 Score =  257 bits (656), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 121/158 (76%), Positives = 144/158 (91%)

Query: 1   MAQSVGEKTGVNSVLGVSPSTVDFVKQVAISDMFEIESNKLAQQKGNAAEKTFASQMVTD 60
           +AQSVGEKTGVNS LG++PST DFVK+VA SDMFE++SNKL ++KGNA EK+FA+QMV D
Sbjct: 18  LAQSVGEKTGVNSALGITPSTEDFVKEVATSDMFELQSNKLGEEKGNAQEKSFAAQMVKD 77

Query: 61  HTKTSTELKGLVTSGKVKAELPSALDSSHQSKLDKLKGANGNDFSSEFNSMQVSAHKDAV 120
           HTKTS+ELK +V SGKVKA+LP+ LDS+HQSKLDKLKGA+G DFS++F+ MQVSAHKDAV
Sbjct: 78  HTKTSSELKSMVGSGKVKAQLPTTLDSAHQSKLDKLKGADGKDFSADFDDMQVSAHKDAV 137

Query: 121 DLFERYAKGGDNADLKNWAGKTLPALKHHLEMAQDLDK 158
            LFERYAKGGDN +LK+WAGKTLPAL+HHLEMAQ+L K
Sbjct: 138 SLFERYAKGGDNPELKDWAGKTLPALQHHLEMAQNLSK 175


>ref|YP_570338.1| hypothetical protein RPD_3212 [Rhodopseudomonas palustris BisB5]
 gb|ABE40437.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 186

 Score =  253 bits (647), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 121/169 (71%), Positives = 141/169 (83%)

Query: 1   MAQSVGEKTGVNSVLGVSPSTVDFVKQVAISDMFEIESNKLAQQKGNAAEKTFASQMVTD 60
           MAQS+ EKTGVNSVLGV+P+T DFVKQVAISDMFEI+SNK+A+ KGNAAEK FA QM+ D
Sbjct: 18  MAQSITEKTGVNSVLGVAPATADFVKQVAISDMFEIQSNKIAEDKGNAAEKAFAKQMIAD 77

Query: 61  HTKTSTELKGLVTSGKVKAELPSALDSSHQSKLDKLKGANGNDFSSEFNSMQVSAHKDAV 120
           HTKTS ELK  V+ GK++A LP+ALDS+HQSK+DKLK A   DFS+ F   Q+ AHKDAV
Sbjct: 78  HTKTSAELKSAVSGGKIEAALPTALDSNHQSKIDKLKTATAADFSATFIDQQIDAHKDAV 137

Query: 121 DLFERYAKGGDNADLKNWAGKTLPALKHHLEMAQDLDKKPAPTVGEGKK 169
            LFERYAKGGDNA LK+WAGKTLPALKHHLEMAQ+LDK+ + T  +  K
Sbjct: 138 SLFERYAKGGDNAALKDWAGKTLPALKHHLEMAQNLDKQRSTTTSKSNK 186


>ref|NP_948648.1| hypothetical protein RPA3309 [Rhodopseudomonas palustris CGA009]
 emb|CAE28750.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 188

 Score =  252 bits (643), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 120/168 (71%), Positives = 141/168 (83%)

Query: 1   MAQSVGEKTGVNSVLGVSPSTVDFVKQVAISDMFEIESNKLAQQKGNAAEKTFASQMVTD 60
           +AQSV EKTGVNSVLG++P+T DFVKQVAISDMFEI+SN+LA++KGNAA++ FA QM+ D
Sbjct: 18  LAQSVTEKTGVNSVLGIAPTTPDFVKQVAISDMFEIQSNQLAERKGNAAQQAFAKQMIAD 77

Query: 61  HTKTSTELKGLVTSGKVKAELPSALDSSHQSKLDKLKGANGNDFSSEFNSMQVSAHKDAV 120
           HTKTS+ELK +V+ GKVKAELP+ALDS+HQSKLDKLK ANG +FS  F+  QVSAHKDAV
Sbjct: 78  HTKTSSELKAMVSDGKVKAELPTALDSAHQSKLDKLKNANGAEFSETFDEQQVSAHKDAV 137

Query: 121 DLFERYAKGGDNADLKNWAGKTLPALKHHLEMAQDLDKKPAPTVGEGK 168
            LFERYAKGGDN  LK WAG TLP L+HHLEMAQ L++    T  E K
Sbjct: 138 SLFERYAKGGDNDALKKWAGTTLPKLQHHLEMAQQLERDRTNTTSESK 185


>ref|YP_001992706.1| hypothetical protein Rpal_3731 [Rhodopseudomonas palustris TIE-1]
 gb|ACF02231.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 188

 Score =  252 bits (643), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 120/168 (71%), Positives = 141/168 (83%)

Query: 1   MAQSVGEKTGVNSVLGVSPSTVDFVKQVAISDMFEIESNKLAQQKGNAAEKTFASQMVTD 60
           +AQSV EKTGVNSVLG++P+T DFVKQVAISDMFEI+SN+LA++KGNAA++ FA QM+ D
Sbjct: 18  LAQSVTEKTGVNSVLGIAPTTPDFVKQVAISDMFEIQSNQLAERKGNAAQQAFAKQMIAD 77

Query: 61  HTKTSTELKGLVTSGKVKAELPSALDSSHQSKLDKLKGANGNDFSSEFNSMQVSAHKDAV 120
           HTKTS+ELK +V+ GKVKAELP+ALDS+HQSKLDKLK ANG +FS  F+  QVSAHKDAV
Sbjct: 78  HTKTSSELKAMVSDGKVKAELPTALDSTHQSKLDKLKNANGAEFSETFDEQQVSAHKDAV 137

Query: 121 DLFERYAKGGDNADLKNWAGKTLPALKHHLEMAQDLDKKPAPTVGEGK 168
            LFERYAKGGDN  LK WAG TLP L+HHLEMAQ L++    T  E K
Sbjct: 138 SLFERYAKGGDNDALKKWAGTTLPKLQHHLEMAQQLERDRTNTTSESK 185


>ref|YP_782575.1| hypothetical protein RPE_3665 [Rhodopseudomonas palustris BisA53]
 gb|ABJ07595.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
          Length = 187

 Score =  250 bits (638), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 123/170 (72%), Positives = 141/170 (82%), Gaps = 1/170 (0%)

Query: 1   MAQSVGEKTGVNSVLGVSPSTVDFVKQVAISDMFEIESNKLAQQKGNAAEKTFASQMVTD 60
           +AQS+GEKTGVNS LG+SPST DFV QVA+SDMFEI S KLAQ +GNAAEK FA QM+T+
Sbjct: 18  VAQSLGEKTGVNSALGISPSTQDFVTQVAVSDMFEINSAKLAQARGNAAEKKFAEQMITE 77

Query: 61  HTKTSTELKGLVTSGKVKAELPSALDSSHQSKLDKLKGANGNDFSSEFNSMQVSAHKDAV 120
           HTKTS+ELK LVT    +AELP+ LDS+HQSKLDKL  A G+DFSS + S QVSAHKDAV
Sbjct: 78  HTKTSSELKRLVTGTNFRAELPTQLDSAHQSKLDKLNDARGDDFSSLYASQQVSAHKDAV 137

Query: 121 DLFERYAKGGDNADLKNWAGKTLPALKHHLEMAQDLD-KKPAPTVGEGKK 169
            LFERYA GGD A+LK+WAGKTLPALKHHLEMA+ LD ++ APTVG   K
Sbjct: 138 ALFERYANGGDQAELKDWAGKTLPALKHHLEMAEQLDQQRSAPTVGSTTK 187