BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0100.0016.p (214 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001415802.1| TetR family transcriptional regulator [Xanth... 234 7e-60 ref|YP_568960.1| TetR family transcriptional regulator [Rhodopse... 231 6e-59 ref|YP_487248.1| TetR family transcriptional regulator [Rhodopse... 228 5e-58 ref|YP_002498593.1| TetR family transcriptional regulator [Methy... 226 2e-57 ref|NP_949106.1| TetR family transcriptional regulator [Rhodopse... 221 8e-56 >ref|YP_001415802.1| TetR family transcriptional regulator [Xanthobacter autotrophicus Py2] gb|ABS66145.1| transcriptional regulator, TetR family [Xanthobacter autotrophicus Py2] Length = 260 Score = 234 bits (597), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 119/187 (63%), Positives = 140/187 (74%), Gaps = 5/187 (2%) Query: 1 MARSRAKDYDDKRLSMLHRSAELFAASGYVGTSMNTIADACGVSKALLYHYYPDKEAILF 60 MAR+RA+DYD KR +LH+SAELFA GY GTS+ IA+ACG SKALLYHYYPDKEA+LF Sbjct: 19 MARTRAQDYDAKRQVILHKSAELFAQFGYSGTSITMIAEACGASKALLYHYYPDKEAVLF 78 Query: 61 DILSSHLAKLVAAVRKA--SAQAGDPVARFGTIVATLLELYRHADAEHQVPISSLKLLPK 118 DILS+HL +L+ AV A +A GD R I A LLE YR ADAEHQ+ I++LKLLP Sbjct: 79 DILSTHLEQLIQAVEAALEAAPEGD---RLFAIAAALLEAYRDADAEHQIQIANLKLLPA 135 Query: 119 DKQQPLLANERILVGIMSDALAAAVPAAKQKRVLKPLTMSVFGMLNWHYMWFREGGPMTR 178 DKQ L A ER LV +MSDA+A VP + +LKP+TMS FGMLNWHY+WFREG +TR Sbjct: 136 DKQDALRAMERQLVVLMSDAIAQEVPEIGRGPLLKPVTMSAFGMLNWHYLWFREGKGLTR 195 Query: 179 AEYAGFV 185 AEYA V Sbjct: 196 AEYARLV 202 >ref|YP_568960.1| TetR family transcriptional regulator [Rhodopseudomonas palustris BisB5] gb|ABE39059.1| transcriptional regulator, TetR family [Rhodopseudomonas palustris BisB5] Length = 222 Score = 231 bits (589), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 122/210 (58%), Positives = 148/210 (70%), Gaps = 7/210 (3%) Query: 1 MARSRAKDYDDKRLSMLHRSAELFAASGYVGTSMNTIADACGVSKALLYHYYPDKEAILF 60 MAR+RA DYD KRL +L RSA+LFA GY GTS+ IA+ACGVSKAL+YHYY K+A+LF Sbjct: 1 MARTRANDYDQKRLGILSRSAKLFAEHGYTGTSITMIAEACGVSKALMYHYYRSKDAVLF 60 Query: 61 DILSSHLAKLVAAVRKASAQAGDPVARFGTIVATLLELYRHADAEHQVPISSLKLLPKDK 120 D+L+ HL LV V A+ GD R I A LLE YR ADAEHQV ISSLKLLP ++ Sbjct: 61 DLLADHLQHLVGVVEAAAHSDGDANERLFAIAAALLEAYRGADAEHQVQISSLKLLPPEQ 120 Query: 121 QQPLLANERILVGIMSDALAAAVPAAKQK-RVLKPLTMSVFGMLNWHYMWFREGGPMTRA 179 Q+ L A ER LV +MSDA++AA+PAA + +LKPLTMS+FGMLNWHY+WFREG ++R Sbjct: 121 QEELKALERKLVSLMSDAISAAIPAATARPHLLKPLTMSLFGMLNWHYLWFREGKGLSRE 180 Query: 180 EYAGFVAQX----ADDAAAATRPRGKAKSA 205 YA V A+ A AT G AK+A Sbjct: 181 TYARMVTTLMVAGAEQAMDAT--EGDAKTA 208 >ref|YP_487248.1| TetR family transcriptional regulator [Rhodopseudomonas palustris HaA2] gb|ABD08337.1| transcriptional regulator, TetR family [Rhodopseudomonas palustris HaA2] Length = 227 Score = 228 bits (581), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 113/186 (60%), Positives = 135/186 (72%), Gaps = 1/186 (0%) Query: 1 MARSRAKDYDDKRLSMLHRSAELFAASGYVGTSMNTIADACGVSKALLYHYYPDKEAILF 60 MAR+RA DYD KR +L RSA+LFA GY GTS+ IA+ACGVSKAL+YHYY K+A+LF Sbjct: 1 MARTRANDYDQKRRGILSRSAKLFAEHGYTGTSITMIAEACGVSKALMYHYYRSKDAVLF 60 Query: 61 DILSSHLAKLVAAVRKASAQAGDPVARFGTIVATLLELYRHADAEHQVPISSLKLLPKDK 120 D+L+ HL LV V A+ GD R I A LLE YR ADAEHQV ISSLKLLP ++ Sbjct: 61 DLLADHLQHLVGVVESAARSEGDAGERLFAIAAALLEAYRGADAEHQVQISSLKLLPGEQ 120 Query: 121 QQPLLANERILVGIMSDALAAAVPAAKQK-RVLKPLTMSVFGMLNWHYMWFREGGPMTRA 179 Q+ L A ER LV +MSDA++AA+PA K +LKPLTMS+FGMLNWHY+WFREG + R Sbjct: 121 QEELKALERSLVSLMSDAISAAIPATAAKPHLLKPLTMSLFGMLNWHYLWFREGKGLNRQ 180 Query: 180 EYAGFV 185 YA V Sbjct: 181 TYAKMV 186 >ref|YP_002498593.1| TetR family transcriptional regulator [Methylobacterium nodulans ORS 2060] gb|ACL58290.1| transcriptional regulator, TetR family [Methylobacterium nodulans ORS 2060] Length = 229 Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 113/187 (60%), Positives = 142/187 (75%), Gaps = 1/187 (0%) Query: 1 MARSRAKDYDDKRLSMLHRSAELFAASGYVGTSMNTIADACGVSKALLYHYYPDKEAILF 60 MAR+RA+DYD KR ++LH+SAELFA GY GTS+ IA+ACGVSKALLYHYY DKEA+LF Sbjct: 1 MARTRAQDYDLKRQTILHKSAELFAQFGYSGTSIAMIAEACGVSKALLYHYYHDKEAVLF 60 Query: 61 DILSSHLAKLVAAVRKASAQAGDPVARFGTIVATLLELYRHADAEHQVPISSLKLLPKDK 120 DILSSHL +L+ V A A + V+R I A LLE YR ADAEHQV +++LKLLP +K Sbjct: 61 DILSSHLEQLIEVVESALETAPE-VSRIYAIAAALLEAYRDADAEHQVQLANLKLLPAEK 119 Query: 121 QQPLLANERILVGIMSDALAAAVPAAKQKRVLKPLTMSVFGMLNWHYMWFREGGPMTRAE 180 Q+ L ER LV +SDA+A AVP + +LKP+TMS FGM+NWHY+WFR+G ++RA+ Sbjct: 120 QEVLRGMERRLVTYLSDAIAEAVPEIGRGPLLKPVTMSAFGMINWHYLWFRDGKGLSRAD 179 Query: 181 YAGFVAQ 187 YA VA+ Sbjct: 180 YARLVAE 186 >ref|NP_949106.1| TetR family transcriptional regulator [Rhodopseudomonas palustris CGA009] ref|YP_001993261.1| TetR family transcriptional regulator [Rhodopseudomonas palustris TIE-1] emb|CAE29210.1| probable transcriptional regulator, TetR family [Rhodopseudomonas palustris CGA009] gb|ACF02786.1| transcriptional regulator, TetR family [Rhodopseudomonas palustris TIE-1] Length = 226 Score = 221 bits (562), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 127/219 (57%), Positives = 150/219 (68%), Gaps = 10/219 (4%) Query: 1 MARSRAKDYDDKRLSMLHRSAELFAASGYVGTSMNTIADACGVSKALLYHYYPDKEAILF 60 MAR+RA DYDDKR +L RSA LFA GY GTS+ IADACGVSKAL+YHYYP K+A+LF Sbjct: 1 MARTRATDYDDKRRGILSRSARLFAEHGYTGTSITMIADACGVSKALMYHYYPSKDAVLF 60 Query: 61 DILSSHLAKLVAAVRKASAQAGDPVARFGTIVATLLELYRHADAEHQVPISSLKLLPKDK 120 D+L HL LV V A+ DP R I A LLE YR ADAEHQV ISSLKLLP ++ Sbjct: 61 DLLEDHLQHLVTVVDAAAQGESDPSDRLFAISAALLEAYRGADAEHQVQISSLKLLPPEQ 120 Query: 121 QQPLLANERILVGIMSDALAAAVPAAKQK-RVLKPLTMSVFGMLNWHYMWFREGGPMTRA 179 Q+ L A ER LV MSDA+AAA+PAA K +LKPLTMS+FGMLNWHY+WFREG ++R Sbjct: 121 QETLKALERKLVVSMSDAIAAAIPAAAAKPELLKPLTMSLFGMLNWHYLWFREGKGLSRE 180 Query: 180 EYAGFV-------AQXADDAAAATRPRGKAKSAGRSRQT 211 YA V A+ A D A T P KA+ A +++ Sbjct: 181 TYAQMVTTLMIAGAEQAID--AITEPPAKAERAATRKKS 217