BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0100.0010.p (372 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_531499.1| extracellular ligand-binding receptor [Rhodopse... 555 e-156 ref|ZP_08630553.1| high-affinity leucine-specific transport syst... 553 e-155 ref|YP_487291.1| extracellular ligand-binding receptor [Rhodopse... 551 e-155 ref|YP_004107886.1| extracellular ligand-binding receptor [Rhodo... 547 e-153 ref|YP_001204894.1| high-affinity branched-chain amino acid ABC ... 539 e-151 >ref|YP_531499.1| extracellular ligand-binding receptor [Rhodopseudomonas palustris BisB18] gb|ABD87180.1| Extracellular ligand-binding receptor [Rhodopseudomonas palustris BisB18] Length = 371 Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust. Identities = 262/359 (72%), Positives = 307/359 (85%) Query: 10 LALGASLALSGAAMAQDISVAVVGPMTGSEASFGQQFKNGADLAIADINAAGGVLGKKLK 69 LA GASLALS A+AQDI+VAV GPMTGSE++FG+Q +NGA+ A+ D+NAAGGVLGKKL Sbjct: 9 LAFGASLALSTTALAQDITVAVAGPMTGSESAFGRQLQNGAEQAVVDLNAAGGVLGKKLA 68 Query: 70 LEVGDDACDPKQAVSVAEKMAGARIPFVVGHFCSSTSIPASDAYAEGNVLQITPGSTNPQ 129 L+VGDD CDPKQA SVAEK+AG++IPFV GHFCSS+SIPAS+AYAEGNVLQITPGSTNP Sbjct: 69 LQVGDDGCDPKQARSVAEKIAGSKIPFVAGHFCSSSSIPASEAYAEGNVLQITPGSTNPL 128 Query: 130 FTERGLWNTFRVCGRDDQQGTVAAAYIIKNYNTKNVAIIHDKTTYGKGLADETKKAINAA 189 FTER LWN RVCGRDDQQG VAA YI+KNY KNVAI++DKTTYGKGLADETKKA+N A Sbjct: 129 FTERKLWNVLRVCGRDDQQGLVAADYIVKNYKGKNVAILNDKTTYGKGLADETKKALNKA 188 Query: 190 GVKEKLYEAYTKGDKDFAALVSRFKKESIDFVYVGGYYAEAALILRQMREQGVNAVLMGG 249 G E ++E+Y KGDKDF ++VSR K+E+ID V+VGGY+ EA LILRQMR+QG+ VLM G Sbjct: 189 GFTEAMFESYNKGDKDFNSIVSRLKRENIDLVFVGGYHQEAGLILRQMRDQGLKTVLMAG 248 Query: 250 DALVDKQFAAIAGPLAEGSLFTFSPDPRKKATAAATLKKFKDKGIDPDGYTLYSYAAFQI 309 DA+ D++FA+I GPLAEG+LFTF PDPR K TA A ++KFK K IDP+GYTLY+YAAFQI Sbjct: 249 DAMNDREFASITGPLAEGTLFTFGPDPRNKPTAKAIVEKFKAKNIDPEGYTLYTYAAFQI 308 Query: 310 WSQAAARAQTTDAKKVAAAIKAGSWDTVLGKISYTPKGDITLIDYVVYRRDKDGNYAEL 368 WS+AA +A TTD KKV AAIKAG WDTVLGK+S+ KGDI LIDYVVY+ D GNYAE+ Sbjct: 309 WSEAAKKAGTTDPKKVMAAIKAGEWDTVLGKLSFDAKGDIKLIDYVVYKWDAKGNYAEI 367 >ref|ZP_08630553.1| high-affinity leucine-specific transport system, periplasmic binding protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06932.1| high-affinity leucine-specific transport system, periplasmic binding protein [Bradyrhizobiaceae bacterium SG-6C] Length = 371 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 262/362 (72%), Positives = 308/362 (85%) Query: 10 LALGASLALSGAAMAQDISVAVVGPMTGSEASFGQQFKNGADLAIADINAAGGVLGKKLK 69 LALGAS+A+S AA AQDISVAV GPMTGSE++FG+Q KNGADLA+ADINAAGGV GKKL Sbjct: 9 LALGASIAMSTAAFAQDISVAVAGPMTGSESAFGRQMKNGADLAVADINAAGGVNGKKLA 68 Query: 70 LEVGDDACDPKQAVSVAEKMAGARIPFVVGHFCSSTSIPASDAYAEGNVLQITPGSTNPQ 129 L++GDDACDPKQA SVAEK+A +++ FV GHFCSS+SIPAS+AYAEGNVLQITP STNP Sbjct: 69 LQIGDDACDPKQARSVAEKLASSKVQFVAGHFCSSSSIPASEAYAEGNVLQITPASTNPV 128 Query: 130 FTERGLWNTFRVCGRDDQQGTVAAAYIIKNYNTKNVAIIHDKTTYGKGLADETKKAINAA 189 FTER LWN RVCGRDDQQGTVAA YI+K + KNVAI++DKTTYGKGLADETKKA+NA Sbjct: 129 FTERKLWNVLRVCGRDDQQGTVAAQYILKAFAGKNVAILNDKTTYGKGLADETKKALNAG 188 Query: 190 GVKEKLYEAYTKGDKDFAALVSRFKKESIDFVYVGGYYAEAALILRQMREQGVNAVLMGG 249 G+KEKL+E+Y KGDKDF ++VSR K+++ID VYVGGY+ EA LILRQMR+QG+ +LM G Sbjct: 189 GMKEKLFESYNKGDKDFNSIVSRLKRDNIDLVYVGGYHQEAGLILRQMRDQGMKTLLMAG 248 Query: 250 DALVDKQFAAIAGPLAEGSLFTFSPDPRKKATAAATLKKFKDKGIDPDGYTLYSYAAFQI 309 DA+ DK+FA+I G LAEG+LFTF PDPR K TA + ++KFK KGIDP+GYTLY+YAAFQI Sbjct: 249 DAMNDKEFASITGALAEGTLFTFGPDPRNKPTAKSIVEKFKAKGIDPEGYTLYTYAAFQI 308 Query: 310 WSQAAARAQTTDAKKVAAAIKAGSWDTVLGKISYTPKGDITLIDYVVYRRDKDGNYAELP 369 WSQA A+A+TTD KKV IK G WDTVLGK+++ KGDI IDYVVYR D GNYAE+ Sbjct: 309 WSQAVAKAKTTDPKKVMETIKGGEWDTVLGKLAFDAKGDIKAIDYVVYRWDAKGNYAEIN 368 Query: 370 AG 371 G Sbjct: 369 KG 370 >ref|YP_487291.1| extracellular ligand-binding receptor [Rhodopseudomonas palustris HaA2] gb|ABD08380.1| Extracellular ligand-binding receptor [Rhodopseudomonas palustris HaA2] Length = 371 Score = 551 bits (1420), Expect = e-155, Method: Compositional matrix adjust. Identities = 261/369 (70%), Positives = 308/369 (83%), Gaps = 2/369 (0%) Query: 1 MKSALRGYFLALGASLALSGAAMAQDISVAVVGPMTGSEASFGQQFKNGADLAIADINAA 60 MK L G LA GASLALS A+AQDI VAV GPMTGSE++FG+Q KNGAD A+AD+NA Sbjct: 1 MKLKLLG--LAFGASLALSTTALAQDIKVAVSGPMTGSESAFGRQLKNGADQAVADLNAG 58 Query: 61 GGVLGKKLKLEVGDDACDPKQAVSVAEKMAGARIPFVVGHFCSSTSIPASDAYAEGNVLQ 120 GGVLGKKL L++GDDACDPKQA S+AEK+AG IPFV GHFCSS+SIPAS+AYA+GNVLQ Sbjct: 59 GGVLGKKLALQIGDDACDPKQARSIAEKLAGEGIPFVAGHFCSSSSIPASEAYADGNVLQ 118 Query: 121 ITPGSTNPQFTERGLWNTFRVCGRDDQQGTVAAAYIIKNYNTKNVAIIHDKTTYGKGLAD 180 ITP STNP FTER LWN RVCGRDDQQG +AA YI KN+ KNVAI++DKTTYGKGLAD Sbjct: 119 ITPASTNPLFTERKLWNVLRVCGRDDQQGLIAAEYITKNFKGKNVAILNDKTTYGKGLAD 178 Query: 181 ETKKAINAAGVKEKLYEAYTKGDKDFAALVSRFKKESIDFVYVGGYYAEAALILRQMREQ 240 ETKKA+N AG +EK++E+Y KGDKDF ++VSR K++SID VY+GGY+ EA LILRQMR+Q Sbjct: 179 ETKKALNKAGFQEKMFESYNKGDKDFNSIVSRLKRDSIDLVYIGGYHQEAGLILRQMRDQ 238 Query: 241 GVNAVLMGGDALVDKQFAAIAGPLAEGSLFTFSPDPRKKATAAATLKKFKDKGIDPDGYT 300 G+ +M GDA+ DK+FA+I GPLAEG+LFTF PDPR K TA A ++KFK KGIDP+GYT Sbjct: 239 GLKTAMMAGDAMNDKEFASITGPLAEGTLFTFGPDPRNKPTAKAIVEKFKAKGIDPEGYT 298 Query: 301 LYSYAAFQIWSQAAARAQTTDAKKVAAAIKAGSWDTVLGKISYTPKGDITLIDYVVYRRD 360 LY+YAAFQ+WSQA A+A+TTD KKV IKAG WDTVLGK+++ KGDI IDYVVY+ D Sbjct: 299 LYTYAAFQVWSQAVAKAKTTDPKKVIDTIKAGEWDTVLGKMAFDAKGDIKAIDYVVYKWD 358 Query: 361 KDGNYAELP 369 GNYAE+P Sbjct: 359 AKGNYAEIP 367 >ref|YP_004107886.1| extracellular ligand-binding receptor [Rhodopseudomonas palustris DX-1] gb|ADU43153.1| Extracellular ligand-binding receptor [Rhodopseudomonas palustris DX-1] Length = 368 Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust. Identities = 259/368 (70%), Positives = 308/368 (83%), Gaps = 2/368 (0%) Query: 1 MKSALRGYFLALGASLALSGAAMAQDISVAVVGPMTGSEASFGQQFKNGADLAIADINAA 60 MK L G LA GASLALS A+AQDI+VAV GPMTG E++FG+Q KNGAD A+AD+NAA Sbjct: 1 MKLKLLG--LAFGASLALSTTALAQDITVAVAGPMTGGESAFGRQLKNGADQAVADLNAA 58 Query: 61 GGVLGKKLKLEVGDDACDPKQAVSVAEKMAGARIPFVVGHFCSSTSIPASDAYAEGNVLQ 120 GGVLGK+LKL+ GDDACDPKQA S+AEK+AG IPFV GHFCSS+SIPAS+AYA+GN LQ Sbjct: 59 GGVLGKQLKLQTGDDACDPKQARSIAEKIAGDGIPFVAGHFCSSSSIPASEAYADGNTLQ 118 Query: 121 ITPGSTNPQFTERGLWNTFRVCGRDDQQGTVAAAYIIKNYNTKNVAIIHDKTTYGKGLAD 180 ITP STNP FTER LWN RVCGRDDQQG +AA YI+KNY KNVAI++DKTTYGKGLAD Sbjct: 119 ITPASTNPLFTERKLWNVLRVCGRDDQQGLIAAEYILKNYQGKNVAILNDKTTYGKGLAD 178 Query: 181 ETKKAINAAGVKEKLYEAYTKGDKDFAALVSRFKKESIDFVYVGGYYAEAALILRQMREQ 240 ETKKA+N AG +EK++E+Y KGDKDF ++VSR K+++ID VY+GGY+ EA LILRQMR+Q Sbjct: 179 ETKKALNKAGFQEKMFESYNKGDKDFNSIVSRLKRDAIDLVYIGGYHQEAGLILRQMRDQ 238 Query: 241 GVNAVLMGGDALVDKQFAAIAGPLAEGSLFTFSPDPRKKATAAATLKKFKDKGIDPDGYT 300 G+ V+M GDA+ DK+FA+I GPLAEG+LFTF PDPR K TA A ++KFK KGIDP+GYT Sbjct: 239 GLKTVMMAGDAMNDKEFASITGPLAEGTLFTFGPDPRNKPTAKAIVEKFKGKGIDPEGYT 298 Query: 301 LYSYAAFQIWSQAAARAQTTDAKKVAAAIKAGSWDTVLGKISYTPKGDITLIDYVVYRRD 360 LY+YAAFQIWSQA +A++TD KKV IKAG WDTVLGK+++ KGDI IDYVVY+ D Sbjct: 299 LYTYAAFQIWSQAVEKAKSTDPKKVIETIKAGEWDTVLGKLAFDAKGDIKAIDYVVYKWD 358 Query: 361 KDGNYAEL 368 GNYAE+ Sbjct: 359 AKGNYAEI 366 >ref|YP_001204894.1| high-affinity branched-chain amino acid ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL76657.1| high-affinity branched-chain amino acid ABC transporter (substrate-binding protein) [Bradyrhizobium sp. ORS 278] Length = 372 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 256/363 (70%), Positives = 303/363 (83%) Query: 10 LALGASLALSGAAMAQDISVAVVGPMTGSEASFGQQFKNGADLAIADINAAGGVLGKKLK 69 LALGA+LALS AA A+DI++AV GPMTG E++FG+Q +NGA++AIAD+NAAGGVLGKKL Sbjct: 9 LALGATLALSTAAYAEDITIAVAGPMTGGESAFGRQMQNGAEMAIADLNAAGGVLGKKLA 68 Query: 70 LEVGDDACDPKQAVSVAEKMAGARIPFVVGHFCSSTSIPASDAYAEGNVLQITPGSTNPQ 129 L+VGDDACDPKQA SVAEK+AG+ IPFV GHFCSS+SIPAS+AYA+ NVLQITP STNP Sbjct: 69 LQVGDDACDPKQARSVAEKLAGSGIPFVAGHFCSSSSIPASEAYADSNVLQITPASTNPL 128 Query: 130 FTERGLWNTFRVCGRDDQQGTVAAAYIIKNYNTKNVAIIHDKTTYGKGLADETKKAINAA 189 FTER LWN RVCGRDDQQG VAA YI KN+ KN+AI++DKTTYGKGLADETKKA+N A Sbjct: 129 FTERKLWNVARVCGRDDQQGLVAANYIAKNFKGKNIAILNDKTTYGKGLADETKKALNKA 188 Query: 190 GVKEKLYEAYTKGDKDFAALVSRFKKESIDFVYVGGYYAEAALILRQMREQGVNAVLMGG 249 GV EK++E+Y KGDKDF A+VSR K+E+ID VYVGGY+ EA LILRQMR+QG+ +LM G Sbjct: 189 GVTEKMFESYNKGDKDFNAIVSRLKRENIDLVYVGGYHQEAGLILRQMRDQGLKTILMAG 248 Query: 250 DALVDKQFAAIAGPLAEGSLFTFSPDPRKKATAAATLKKFKDKGIDPDGYTLYSYAAFQI 309 DA+ DK+FA+I GP AEG+LFTF P+PR K TA A ++KFK K IDP+GYTLY+YAA Q+ Sbjct: 249 DAMNDKEFASITGPAAEGTLFTFGPEPRNKPTAKAIVEKFKAKNIDPEGYTLYTYAAIQV 308 Query: 310 WSQAAARAQTTDAKKVAAAIKAGSWDTVLGKISYTPKGDITLIDYVVYRRDKDGNYAELP 369 WSQA +A TTDAKKV IKAG WDTVLGK+ + KGDI IDYVVY+ D G YAEL Sbjct: 309 WSQAVKKANTTDAKKVMDTIKAGEWDTVLGKLGFDAKGDIKQIDYVVYKWDAKGGYAELG 368 Query: 370 AGQ 372 G+ Sbjct: 369 GGK 371