BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0099.0015.p (516 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_578790.1| acriflavin resistance protein [Nitrobacter hamb... 734 0.0 ref|YP_004751838.1| transmembrane drug efflux pump [Collimonas f... 647 0.0 ref|YP_004227800.1| acriflavin resistance protein [Burkholderia ... 635 e-180 ref|ZP_02907015.1| acriflavin resistance protein [Burkholderia a... 629 e-178 ref|YP_001807785.1| acriflavin resistance protein [Burkholderia ... 627 e-177 >ref|YP_578790.1| acriflavin resistance protein [Nitrobacter hamburgensis X14] gb|ABE64330.1| acriflavin resistance protein [Nitrobacter hamburgensis X14] Length = 1096 Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/514 (73%), Positives = 448/514 (87%), Gaps = 3/514 (0%) Query: 1 LTSDTLTPAELYDAASTVLAQKLSQVEGIGEVVVGGSSLPAVRVDLIPQALYKYGIGLED 60 LTSDTL+ +LYDAASTVL+QKLSQVEGIGEVVVGGSSLPAVRV+L+PQALYKYGIGLED Sbjct: 144 LTSDTLSRGQLYDAASTVLSQKLSQVEGIGEVVVGGSSLPAVRVELVPQALYKYGIGLED 203 Query: 61 VRAALSSANAHSPKGGIDVGNQSYQIYANDQARKAADYRPLVVAYRNGAAVRLTDVGDVI 120 VRAAL+SANAHSPKGGIDVG Q YQIYANDQA A Y+PL++AYRNGAAVRL+DVG+V Sbjct: 204 VRAALASANAHSPKGGIDVGAQRYQIYANDQANAAEQYKPLIIAYRNGAAVRLSDVGEVS 263 Query: 121 DSVENVRTLGLSNGKPAVVMIVYRQPGANIIKMVDSVKGLMPQLKASVSPAVDVTLAMDR 180 DSVEN+R GL+NGKPAV++++YRQPG NII +VD V LMPQL+ASVSPA+D+ +A+DR Sbjct: 264 DSVENLRNAGLANGKPAVLLVLYRQPGRNIIGIVDRVTALMPQLRASVSPAIDLDIAVDR 323 Query: 181 SKTIRASLHDVEITLLIAVALVILVVFAFLRNARATLVPVVAVGVSLIATFAVMYLLGYT 240 S TIR+SL DVEITLLIA+ LV++VVFAFLRN RATL+PVVAV VSL+ATFAVMYL+GY+ Sbjct: 324 STTIRSSLRDVEITLLIAIFLVVVVVFAFLRNGRATLIPVVAVSVSLVATFAVMYLMGYS 383 Query: 241 LDIFSLMALTVATGFVVDDAIVVLENITRHMDAGLSRLEATLVGTREVGFTVLSMSVSLV 300 LD SLMALTVATGFVVDDAIVVLENITRH++AG+SRL+A L+G REVGFTVLSMSVSL+ Sbjct: 384 LDNLSLMALTVATGFVVDDAIVVLENITRHLEAGMSRLDAALLGAREVGFTVLSMSVSLI 443 Query: 301 AVFVPILLMGGLVGRLFREFAMTITIAIVISLVVSLTTTPMMCAVLLRKEEGRPHGRIYR 360 AVF+PILLMGG+VGRLFREFAMTI+IAI+ISL +SL TTPMMCA+LLR++ R HGR+Y+ Sbjct: 444 AVFIPILLMGGIVGRLFREFAMTISIAIMISLAISLATTPMMCAILLRRQSDRSHGRLYQ 503 Query: 361 ISERIFELMLNGYRATLGLALRHPLLVMLILGSTLYLNFHLYKVVPKGFVPQQDTGLLVG 420 SE +F MLNGYR +L +ALRHP VM+IL + L LNF+LY V+PKGF PQQDTG L+G Sbjct: 504 ASEHVFTAMLNGYRRSLNVALRHPRSVMMILLTILGLNFYLYDVIPKGFFPQQDTGRLIG 563 Query: 421 SIQADQSTSFQLMQQKLTQFIDIVKSDPAVDTAVGFTGXVGPGGTNTGTVFASLKPMDER 480 IQADQSTSFQLMQ+KLTQF+ I+ DPAV+TAVGFTG G N+G +F +LKP++ R Sbjct: 564 IIQADQSTSFQLMQKKLTQFVSIITKDPAVETAVGFTGG---GQINSGFMFVALKPLETR 620 Query: 481 RLRADKVIERLREPLASVAGATLFLQSIGDLGAG 514 +L AD+VI RLR LA V GATLFLQ++ D+ AG Sbjct: 621 KLSADEVIGRLRRELAVVPGATLFLQAVQDIRAG 654 >ref|YP_004751838.1| transmembrane drug efflux pump [Collimonas fungivorans Ter331] gb|AEK61015.1| Transmembrane drug efflux pump [Collimonas fungivorans Ter331] Length = 1072 Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/514 (60%), Positives = 409/514 (79%), Gaps = 3/514 (0%) Query: 1 LTSDTLTPAELYDAASTVLAQKLSQVEGIGEVVVGGSSLPAVRVDLIPQALYKYGIGLED 60 LTSD++T ++YDAA T+LAQKLSQV+GIG+V VGGSS PAVRV+L P AL KYGIG D Sbjct: 144 LTSDSMTQGQMYDAADTILAQKLSQVKGIGQVSVGGSSQPAVRVELNPTALNKYGIGTAD 203 Query: 61 VRAALSSANAHSPKGGIDVGNQSYQIYANDQARKAADYRPLVVAYRNGAAVRLTDVGDVI 120 VR A+++ NA+ PKG ++ G++++QIYANDQA+ AA+Y PL+V+YRNGA VR++DV V+ Sbjct: 204 VRTAIAATNANRPKGMLEDGDKNWQIYANDQAKTAAEYMPLIVSYRNGAPVRVSDVATVV 263 Query: 121 DSVENVRTLGLSNGKPAVVMIVYRQPGANIIKMVDSVKGLMPQLKASVSPAVDVTLAMDR 180 DSV N+R G +NGKP+V++I+ RQPGANII+ VD V+ L+PQL+AS+ A+++ +A+DR Sbjct: 264 DSVSNLRNAGSANGKPSVLVILNRQPGANIIETVDEVRALLPQLRASIPAAINLDVALDR 323 Query: 181 SKTIRASLHDVEITLLIAVALVILVVFAFLRNARATLVPVVAVGVSLIATFAVMYLLGYT 240 + TIRASLH+ E TLL+++ALVI+VVF FLRN RATL+P VAV +SLI TF VMYLLGY+ Sbjct: 324 TPTIRASLHETESTLLMSIALVIMVVFLFLRNGRATLIPAVAVPISLIGTFGVMYLLGYS 383 Query: 241 LDIFSLMALTVATGFVVDDAIVVLENITRHMDAGLSRLEATLVGTREVGFTVLSMSVSLV 300 LD SLMALT+ATGFVVDDAIVVLEN++RH++ G+ A L GT+EVGFTVLSMS+SL+ Sbjct: 384 LDNLSLMALTIATGFVVDDAIVVLENVSRHIEEGMKPFAAALKGTKEVGFTVLSMSISLI 443 Query: 301 AVFVPILLMGGLVGRLFREFAMTITIAIVISLVVSLTTTPMMCAVLLRKEEGRPHGRIYR 360 AVF+PILLMGG+VGRLFREFA+T+++AI++SLVVSLTTTPMMCA LL+ + R GR + Sbjct: 444 AVFIPILLMGGIVGRLFREFAVTLSVAILVSLVVSLTTTPMMCARLLKHDPERKQGRFFN 503 Query: 361 ISERIFELMLNGYRATLGLALRHPLLVMLILGSTLYLNFHLYKVVPKGFVPQQDTGLLVG 420 +ER F+ ML GY +L ALR L+MLIL T+ LN +LY +PKG PQQDTGL++G Sbjct: 504 ATERAFDAMLRGYERSLAWALRFAPLMMLILLGTIVLNVYLYTAIPKGLFPQQDTGLVIG 563 Query: 421 SIQADQSTSFQLMQQKLTQFIDIVKSDPAVDTAVGFTGXVGPGGTNTGTVFASLKPMDER 480 IQ DQS SFQ M+ KL QF+DIV+ DP V + + FTG G +N G +F +L+P+ +R Sbjct: 564 GIQGDQSISFQSMRVKLDQFVDIVRKDPDVKSVIAFTGG---GQSNRGQMFITLQPLTQR 620 Query: 481 RLRADKVIERLREPLASVAGATLFLQSIGDLGAG 514 +L AD+VI RLR L+ +AGA LF+QS+ D+ G Sbjct: 621 KLTADQVIARLRGKLSHIAGANLFMQSVQDIRVG 654 >ref|YP_004227800.1| acriflavin resistance protein [Burkholderia sp. CCGE1001] gb|ADX54740.1| acriflavin resistance protein [Burkholderia sp. CCGE1001] Length = 1109 Score = 635 bits (1638), Expect = e-180, Method: Compositional matrix adjust. Identities = 326/515 (63%), Positives = 407/515 (79%), Gaps = 4/515 (0%) Query: 1 LTSDTLTPAELYDAASTVLAQKLSQVEGIGEVVVGGSSLPAVRVDLIPQALYKYGIGLED 60 LTS TLT +LYD+A+TVL Q LSQVEG+GEV V GS+ PAVRV+L PQAL+ YGIGLED Sbjct: 144 LTSKTLTAGQLYDSAATVLQQSLSQVEGVGEVDVSGSANPAVRVELEPQALFHYGIGLED 203 Query: 61 VRAALSSANAHSPKGGIDVGNQSYQIYANDQARKAADYRPLVVAYRNGAAVRLTDVGDVI 120 VRAAL++ANA+SPKG I+ G QIY NDQA KAA YR LV+AYRNG+AV+L+DV +V+ Sbjct: 204 VRAALAAANANSPKGSIEFGQNRVQIYTNDQASKAAQYRDLVIAYRNGSAVKLSDVAEVV 263 Query: 121 DSVENVRTLGLSNGKPAVVMIVYRQPGANIIKMVDSVKGLMPQLKASVSPAVDVTLAMDR 180 DSVE++R LGL NGK +V++I+YRQPGANII+ +D V ++PQL AS+ VD+TL DR Sbjct: 264 DSVEDLRNLGLFNGKRSVLVILYRQPGANIIETIDRVTAMLPQLHASLPADVDITLTADR 323 Query: 181 SKTIRASLHDVEITLLIAVALVILVVFAFLRNARATLVPVVAVGVSLIATFAVMYLLGYT 240 S TIRASL D E TL+IAVALV++VVF FLRN RATL+P VAV +S+I TF MYLLG++ Sbjct: 324 STTIRASLKDTEHTLMIAVALVVMVVFLFLRNWRATLIPSVAVPISIIGTFGAMYLLGFS 383 Query: 241 LDIFSLMALTVATGFVVDDAIVVLENITRHMDAGLSRLEATLVGTREVGFTVLSMSVSLV 300 +D SLMALT+ATGFVVDDAIVVLENI+RH++ G+ R++A +G REVGFTV+S+S+SLV Sbjct: 384 IDNLSLMALTIATGFVVDDAIVVLENISRHIENGVPRMKAAFLGAREVGFTVMSISISLV 443 Query: 301 AVFVPILLMGGLVGRLFREFAMTITIAIVISLVVSLTTTPMMCAVLLRK-EEGRPHGRIY 359 AVF+PILLMGG+VGRLFREFA+T+++AI +SL+VSLT TPMMC+ LLR+ E R GR Sbjct: 444 AVFLPILLMGGIVGRLFREFALTLSLAIGVSLIVSLTLTPMMCSRLLREPHEQREEGRFG 503 Query: 360 RISERIFELMLNGYRATLGLALRHPLLVMLILGSTLYLNFHLYKVVPKGFVPQQDTGLLV 419 R ER F M GY TLG AL HP L++ +L +T+ LN LY VVPKGF PQQDTG L+ Sbjct: 504 RWLERGFARMQRGYERTLGWALLHPRLILFVLLATIGLNIWLYIVVPKGFFPQQDTGRLI 563 Query: 420 GSIQADQSTSFQLMQQKLTQFIDIVKSDPAVDTAVGFTGXVGPGGTNTGTVFASLKPMDE 479 G IQADQSTSFQ M+ K +Q ++IV +PAVD+ VGFTG TN+G +F SLKP E Sbjct: 564 GGIQADQSTSFQAMKGKFSQMMEIVGKNPAVDSVVGFTGG---RQTNSGFMFVSLKPKTE 620 Query: 480 RRLRADKVIERLREPLASVAGATLFLQSIGDLGAG 514 R++ AD+VI++LR PLA VAGA FLQ++ D+ G Sbjct: 621 RKISADQVIQQLRAPLADVAGARTFLQAVQDIRVG 655 >ref|ZP_02907015.1| acriflavin resistance protein [Burkholderia ambifaria MEX-5] gb|EDT41869.1| acriflavin resistance protein [Burkholderia ambifaria MEX-5] Length = 1102 Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust. Identities = 326/515 (63%), Positives = 407/515 (79%), Gaps = 4/515 (0%) Query: 1 LTSDTLTPAELYDAASTVLAQKLSQVEGIGEVVVGGSSLPAVRVDLIPQALYKYGIGLED 60 LTS+T +PA+LYDAASTVL Q LSQ++GIG+V V GS+ PAVRV+L P AL+ YGIGLED Sbjct: 144 LTSETSSPAKLYDAASTVLQQSLSQIDGIGQVSVSGSANPAVRVELEPHALFHYGIGLED 203 Query: 61 VRAALSSANAHSPKGGIDVGNQSYQIYANDQARKAADYRPLVVAYRNGAAVRLTDVGDVI 120 VRAAL+SANA+SPKG I+ G + YQ+Y NDQA A+ Y LVVAYRNGAAVRL+D+ +V+ Sbjct: 204 VRAALASANANSPKGAIEFGPKHYQLYTNDQASHASQYSDLVVAYRNGAAVRLSDLSEVV 263 Query: 121 DSVENVRTLGLSNGKPAVVMIVYRQPGANIIKMVDSVKGLMPQLKASVSPAVDVTLAMDR 180 DSVE++R LGLSNGK AV++I+YR PGANII+ +D V+ +PQL AS+ + VT +DR Sbjct: 264 DSVEDLRNLGLSNGKRAVLVILYRSPGANIIETIDRVRTALPQLTASLPADITVTPVLDR 323 Query: 181 SKTIRASLHDVEITLLIAVALVILVVFAFLRNARATLVPVVAVGVSLIATFAVMYLLGYT 240 S TIRASL D E TLLIA++LV++VVF FLRN RATL+P VAV +S+I TF MYLLG++ Sbjct: 324 STTIRASLKDTEHTLLIAISLVVMVVFLFLRNWRATLIPSVAVPISIIGTFGAMYLLGFS 383 Query: 241 LDIFSLMALTVATGFVVDDAIVVLENITRHMDAGLSRLEATLVGTREVGFTVLSMSVSLV 300 +D SLMAL VATGFVVDDAIVVLENITRH++ G RL+A G REVGFTVLSMS+SLV Sbjct: 384 IDNLSLMALIVATGFVVDDAIVVLENITRHIENGKPRLQAAFDGAREVGFTVLSMSISLV 443 Query: 301 AVFVPILLMGGLVGRLFREFAMTITIAIVISLVVSLTTTPMMCAVLLRK-EEGRPHGRIY 359 AVF+PILLMGG+VGRLFREFA+T+++AI +SL VSLT TPMMCA LLR+ + R GR+ Sbjct: 444 AVFLPILLMGGIVGRLFREFALTLSLAIAVSLAVSLTVTPMMCARLLREPHDAREEGRVG 503 Query: 360 RISERIFELMLNGYRATLGLALRHPLLVMLILGSTLYLNFHLYKVVPKGFVPQQDTGLLV 419 R ER F M GY +L ALR PLLV+LIL +T+ LN +LY +VPKGF PQQDTGL++ Sbjct: 504 RFLERFFTRMQRGYERSLSWALRRPLLVLLILFATIGLNVYLYIIVPKGFFPQQDTGLMI 563 Query: 420 GSIQADQSTSFQLMQQKLTQFIDIVKSDPAVDTAVGFTGXVGPGGTNTGTVFASLKPMDE 479 G I+ADQSTSFQ M+QK T+ + IV+S+P V +A GFTG TN+G +F +LK E Sbjct: 564 GGIRADQSTSFQAMKQKFTEMMRIVQSNPNVQSAAGFTGGT---QTNSGFMFVTLKDRTE 620 Query: 480 RRLRADKVIERLREPLASVAGATLFLQSIGDLGAG 514 R+L AD+VI++LR+PLA VAGA+ FLQ+ D+ G Sbjct: 621 RKLSADQVIQQLRKPLADVAGASTFLQAAQDIRVG 655 >ref|YP_001807785.1| acriflavin resistance protein [Burkholderia ambifaria MC40-6] gb|ACB63569.1| acriflavin resistance protein [Burkholderia ambifaria MC40-6] Length = 1102 Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust. Identities = 325/515 (63%), Positives = 406/515 (78%), Gaps = 4/515 (0%) Query: 1 LTSDTLTPAELYDAASTVLAQKLSQVEGIGEVVVGGSSLPAVRVDLIPQALYKYGIGLED 60 LTS+T +PA+LYDAASTVL Q LSQ++GIG+V V GS+ PAVRV+L P AL+ YGIGLED Sbjct: 144 LTSETSSPAKLYDAASTVLQQSLSQIDGIGQVSVSGSANPAVRVELEPHALFHYGIGLED 203 Query: 61 VRAALSSANAHSPKGGIDVGNQSYQIYANDQARKAADYRPLVVAYRNGAAVRLTDVGDVI 120 VRAAL+SANA+SPKG I+ G + YQ+Y NDQA A+ Y LVVAYRNGAAVRL+D+ +V+ Sbjct: 204 VRAALASANANSPKGAIEFGPKHYQLYTNDQASHASQYSDLVVAYRNGAAVRLSDLSEVV 263 Query: 121 DSVENVRTLGLSNGKPAVVMIVYRQPGANIIKMVDSVKGLMPQLKASVSPAVDVTLAMDR 180 DSVE++R LGLSNGK AV++I+YR PGANII+ +D V+ +PQL AS+ + VT +DR Sbjct: 264 DSVEDLRNLGLSNGKRAVLVILYRSPGANIIETIDRVRTALPQLTASLPADITVTPVLDR 323 Query: 181 SKTIRASLHDVEITLLIAVALVILVVFAFLRNARATLVPVVAVGVSLIATFAVMYLLGYT 240 S TIRASL D E TLLIA++LV++VVF FLRN RATL+P VAV +S+I TF MYLLG++ Sbjct: 324 STTIRASLKDTEHTLLIAISLVVMVVFLFLRNWRATLIPSVAVPISIIGTFGAMYLLGFS 383 Query: 241 LDIFSLMALTVATGFVVDDAIVVLENITRHMDAGLSRLEATLVGTREVGFTVLSMSVSLV 300 +D SLMAL VATGFVVDDAIVVLENITRH++ G RL+A G REVGFTVLSMS+SLV Sbjct: 384 IDNLSLMALIVATGFVVDDAIVVLENITRHIENGKPRLQAAFDGAREVGFTVLSMSISLV 443 Query: 301 AVFVPILLMGGLVGRLFREFAMTITIAIVISLVVSLTTTPMMCAVLLRK-EEGRPHGRIY 359 AVF+PILLMGG+VGRLFREFA+T+++AI +SL VSLT TPMMCA LLR+ + GR+ Sbjct: 444 AVFLPILLMGGIVGRLFREFALTLSLAIAVSLAVSLTVTPMMCARLLREPHDAHEEGRLG 503 Query: 360 RISERIFELMLNGYRATLGLALRHPLLVMLILGSTLYLNFHLYKVVPKGFVPQQDTGLLV 419 R ER F M GY +L ALR PLLV+LIL +T+ LN +LY +VPKGF PQQDTGL++ Sbjct: 504 RFLERFFARMQRGYERSLSWALRRPLLVLLILFATIGLNVYLYIIVPKGFFPQQDTGLMI 563 Query: 420 GSIQADQSTSFQLMQQKLTQFIDIVKSDPAVDTAVGFTGXVGPGGTNTGTVFASLKPMDE 479 G I+ADQSTSFQ M+QK T+ + IV+S+P V +A GFTG TN+G +F +LK E Sbjct: 564 GGIRADQSTSFQAMKQKFTEMMRIVQSNPNVQSAAGFTGGT---QTNSGFMFVTLKDRTE 620 Query: 480 RRLRADKVIERLREPLASVAGATLFLQSIGDLGAG 514 R+L AD+VI++LR+PLA VAGA+ FLQ+ D+ G Sbjct: 621 RKLSADQVIQQLRKPLADVAGASTFLQAAQDIRVG 655