BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0099.0011.p (433 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768035.1| hypothetical protein blr1395 [Bradyrhizobium ja... 568 e-160 ref|YP_001208293.1| hypothetical protein BRADO6465 [Bradyrhizobi... 544 e-152 ref|YP_001237334.1| hypothetical protein BBta_1181 [Bradyrhizobi... 534 e-149 ref|YP_534703.1| hypothetical protein RPC_4862 [Rhodopseudomonas... 516 e-144 ref|YP_576020.1| hypothetical protein Nham_0672 [Nitrobacter ham... 501 e-139 >ref|NP_768035.1| hypothetical protein blr1395 [Bradyrhizobium japonicum USDA 110] dbj|BAC46660.1| blr1395 [Bradyrhizobium japonicum USDA 110] Length = 394 Score = 568 bits (1463), Expect = e-160, Method: Compositional matrix adjust. Identities = 276/395 (69%), Positives = 325/395 (82%), Gaps = 1/395 (0%) Query: 39 MSDQTSAPRRRSRFGLYAVPVAVLIAAVAWSAFWFFAASQVGVQADAWRAQEAKAGRVYD 98 MS+ T A RR R+GL+ P+ +LI AVAWS FWF+AASQ + ADAWRAQEAK+GR+YD Sbjct: 1 MSNLTVAAGRRPRWGLFIAPILLLILAVAWSCFWFYAASQAEIAADAWRAQEAKSGRIYD 60 Query: 99 CGDRSVAGYPFRFEVRCTDPSVMLVSQTASPQMAFVARLAEILVVAQVYDPKLVIAEFKG 158 C RS+AG+PFRFEV+C+ SV LVSQ AS + F ARL ILVVAQVYDPK VIAEF Sbjct: 61 CAKRSIAGFPFRFEVQCSGASVALVSQNAS-KTPFTARLDNILVVAQVYDPKRVIAEFSA 119 Query: 159 PATIAERGAQPTLSVSWSKGRSSVVGLPAVPQRASLVFDDLAIDRTGGATPAPLARVNHI 218 PAT+ + Q T V+WS+GRSSVVGLPAVP RAS+VFDD I+R G+ PLAR + Sbjct: 120 PATLTDGVTQNTFVVNWSRGRSSVVGLPAVPDRASIVFDDPVINRLDGSVQVPLARAKQV 179 Query: 219 ELHGRQVDGSAPDSPAIETVLQIAGGTLQDVHPLLAQPFNADIHARLNGLKDFSPKPWPD 278 ELHGR DGS D P IETVL +A G++Q VHPLLA+PF AD A++ GL D +PKPWP Sbjct: 180 ELHGRLADGSPSDHPVIETVLHVAQGSIQGVHPLLAEPFEADTRAKVTGLSDLTPKPWPQ 239 Query: 279 RFREIQAAGGSVEIQQSRIEQGDVLSVAAGTLRLNAQGRIEGELQMTVAGLERVIPALGI 338 RFREIQAAGG +EI QSRI+QG++++VAAGTL L+A GR++GELQMTV GLERVIPALGI Sbjct: 240 RFREIQAAGGHIEIVQSRIQQGEMIAVAAGTLGLSANGRLDGELQMTVTGLERVIPALGI 299 Query: 339 DKMLEEGVPQSTLDRVAPGVKSQDLSNLFGALDRAIPGLGKVIKQNANAGISAGINSLGT 398 +KMLEEGVPQ+TLDRVAPGVKSQDL+NLFGALDRA+PGLGKVIKQNANAG++AGINS+GT Sbjct: 300 EKMLEEGVPQATLDRVAPGVKSQDLNNLFGALDRAVPGLGKVIKQNANAGVAAGINSIGT 359 Query: 399 EATLEGKKARSFPLRFADGAVFLGPLKVAQIPPLF 433 E+TLEGKKARSFPL+F DGAV LGP+KV QIPPL+ Sbjct: 360 ESTLEGKKARSFPLKFVDGAVLLGPVKVGQIPPLY 394 >ref|YP_001208293.1| hypothetical protein BRADO6465 [Bradyrhizobium sp. ORS 278] emb|CAL80078.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 394 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 269/396 (67%), Positives = 322/396 (81%), Gaps = 3/396 (0%) Query: 39 MSDQTSAPRRRSRFGLYAVPVAVLIAAVAWSAFWFFAASQVGVQADAWRAQEAKAGRVYD 98 MS A RRR +GL PV +LIAAVAWSAFWFFAASQV VQADAWRA+EAKAGRVYD Sbjct: 1 MSRLPQARRRRPLWGLLVAPVLLLIAAVAWSAFWFFAASQVDVQADAWRAREAKAGRVYD 60 Query: 99 CGDRSVAGYPFRFEVRCTDPSVMLVSQTA-SPQMAFVARLAEILVVAQVYDPKLVIAEFK 157 C R+VAG+PFR EVRC+DP+V L SQ A +P M A+L EILVVAQV+DPK +IAEFK Sbjct: 61 CAKRTVAGFPFRLEVRCSDPTVALFSQAAGTPLMN--AKLDEILVVAQVWDPKRIIAEFK 118 Query: 158 GPATIAERGAQPTLSVSWSKGRSSVVGLPAVPQRASLVFDDLAIDRTGGATPAPLARVNH 217 GPATI E + +V+WS G++SV GLP PQRA LVF+ IDR G+ P AR +H Sbjct: 119 GPATITEGRDPASFAVNWSVGQASVRGLPGPPQRADLVFEQPTIDRIEGSAAVPAARADH 178 Query: 218 IELHGRQVDGSAPDSPAIETVLQIAGGTLQDVHPLLAQPFNADIHARLNGLKDFSPKPWP 277 ELHGR +G+ D P +ET LQIA G++Q+ HPLLA+PF++DI AR+ GLKDF PKPWP Sbjct: 179 AELHGRIAEGTPSDHPVLETALQIANGSIQNSHPLLAEPFSSDIQARVTGLKDFRPKPWP 238 Query: 278 DRFREIQAAGGSVEIQQSRIEQGDVLSVAAGTLRLNAQGRIEGELQMTVAGLERVIPALG 337 +RFREIQAAGG VEI Q+RI+QG++L++AAGTL L A G ++GE+QMTVAG+E++IPALG Sbjct: 239 ERFREIQAAGGHVEIVQARIQQGELLAMAAGTLSLTANGNMDGEVQMTVAGMEKIIPALG 298 Query: 338 IDKMLEEGVPQSTLDRVAPGVKSQDLSNLFGALDRAIPGLGKVIKQNANAGISAGINSLG 397 +DKMLE GVPQ TLDRVAPGVKSQD+SNL GALDRAIPGLGKV+KQNAN G++ GIN+LG Sbjct: 299 LDKMLENGVPQGTLDRVAPGVKSQDVSNLLGALDRAIPGLGKVVKQNANVGVALGINALG 358 Query: 398 TEATLEGKKARSFPLRFADGAVFLGPLKVAQIPPLF 433 EATLEG+KAR+FPLRF+DGAV LGP KVA++PPLF Sbjct: 359 KEATLEGRKARTFPLRFSDGAVVLGPFKVARVPPLF 394 >ref|YP_001237334.1| hypothetical protein BBta_1181 [Bradyrhizobium sp. BTAi1] gb|ABQ33428.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 394 Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust. Identities = 276/396 (69%), Positives = 322/396 (81%), Gaps = 3/396 (0%) Query: 39 MSDQTSAPRRRSRFGLYAVPVAVLIAAVAWSAFWFFAASQVGVQADAWRAQEAKAGRVYD 98 MS APRRR +GL A P+ +LIAA+AWS FWFFAASQV VQADAWRA+EAK+GRVYD Sbjct: 1 MSRLPQAPRRRPLWGLLAAPILLLIAAIAWSGFWFFAASQVDVQADAWRAREAKSGRVYD 60 Query: 99 CGDRSVAGYPFRFEVRCTDPSVMLVSQTA-SPQMAFVARLAEILVVAQVYDPKLVIAEFK 157 C RSVAG+PFR EVRC+DPSV L SQ A +P M A+L EILVVAQV+DP+ +IAEFK Sbjct: 61 CAKRSVAGFPFRLEVRCSDPSVALFSQAAGTPLMN--AKLDEILVVAQVWDPQRIIAEFK 118 Query: 158 GPATIAERGAQPTLSVSWSKGRSSVVGLPAVPQRASLVFDDLAIDRTGGATPAPLARVNH 217 GPATIA+ + +V+W G++SV GLP QRA LVFD IDR G P R +H Sbjct: 119 GPATIADGHGPASYAVNWRLGQASVRGLPGPLQRADLVFDQPTIDRVEGGATVPAVRADH 178 Query: 218 IELHGRQVDGSAPDSPAIETVLQIAGGTLQDVHPLLAQPFNADIHARLNGLKDFSPKPWP 277 ELHGR DG+ D P IET LQIA G++QD HPLLA+PFNADI AR+ GLKDF PKPWP Sbjct: 179 AELHGRVADGTPSDHPVIETALQIASGSIQDSHPLLAEPFNADIQARVTGLKDFHPKPWP 238 Query: 278 DRFREIQAAGGSVEIQQSRIEQGDVLSVAAGTLRLNAQGRIEGELQMTVAGLERVIPALG 337 +RFREIQAAGG VEI QSRI+QG++L+VA+GTL L A G I+GE+QMTVAG+E+VIPALG Sbjct: 239 ERFREIQAAGGHVEIVQSRIQQGELLAVASGTLTLTANGGIDGEVQMTVAGIEKVIPALG 298 Query: 338 IDKMLEEGVPQSTLDRVAPGVKSQDLSNLFGALDRAIPGLGKVIKQNANAGISAGINSLG 397 +DKMLE GVPQ+TLDRVAPGVKSQDL+NLFGALDRAIPGLGKV+KQNANAG++ GIN+LG Sbjct: 299 LDKMLENGVPQATLDRVAPGVKSQDLNNLFGALDRAIPGLGKVVKQNANAGVAVGINALG 358 Query: 398 TEATLEGKKARSFPLRFADGAVFLGPLKVAQIPPLF 433 EATLEG+KARSFPLRF+DG V LGP KVA++PPLF Sbjct: 359 KEATLEGRKARSFPLRFSDGVVVLGPFKVARVPPLF 394 >ref|YP_534703.1| hypothetical protein RPC_4862 [Rhodopseudomonas palustris BisB18] gb|ABD90384.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 395 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 247/396 (62%), Positives = 316/396 (79%), Gaps = 2/396 (0%) Query: 39 MSDQTSAPRRRSRFGLYAVPVAVLIAAVAWSAFWFFAASQVGVQADAWRAQEAKAGRVYD 98 MS+ PRRR + ++ +P +L+ A AWS FWF+ A ++ DAWRA+EA +GRVY+ Sbjct: 1 MSEIILTPRRR-LWPVFVLPTVLLVLAAAWSGFWFYTAGRLDQSVDAWRAREAASGRVYE 59 Query: 99 CGDRSVAGYPFRFEVRCTDPSVMLVSQTASP-QMAFVARLAEILVVAQVYDPKLVIAEFK 157 CG+RSVAG+PFR EVRC D SV L SQ+A P Q A+L EILVV Q+YDP+L+IAEF Sbjct: 60 CGNRSVAGFPFRLEVRCKDASVALTSQSAGPEQTPITAKLGEILVVGQIYDPRLLIAEFT 119 Query: 158 GPATIAERGAQPTLSVSWSKGRSSVVGLPAVPQRASLVFDDLAIDRTGGATPAPLARVNH 217 PA +A RG P+++VSWS R+SVVGLP VPQRAS+VFDD +DR GA AR H Sbjct: 120 APAVLAGRGQPPSMAVSWSAARASVVGLPGVPQRASIVFDDAVVDRIAGAVQTAQARARH 179 Query: 218 IELHGRQVDGSAPDSPAIETVLQIAGGTLQDVHPLLAQPFNADIHARLNGLKDFSPKPWP 277 ELHGR +D A +E V Q+AG +LQ++HPLLA+PF+AD+ A LNGL+DFSPKPWP Sbjct: 180 AELHGRLLDAPAAGPQPLEAVAQLAGASLQELHPLLAEPFDADLRAVLNGLQDFSPKPWP 239 Query: 278 DRFREIQAAGGSVEIQQSRIEQGDVLSVAAGTLRLNAQGRIEGELQMTVAGLERVIPALG 337 RFRE+QAAGG VEI +SRI+QG++++VAAGTL L+ GRI+GELQMTVAGL++V+PALG Sbjct: 240 QRFRELQAAGGKVEISRSRIQQGELIAVAAGTLGLSPNGRIDGELQMTVAGLDKVVPALG 299 Query: 338 IDKMLEEGVPQSTLDRVAPGVKSQDLSNLFGALDRAIPGLGKVIKQNANAGISAGINSLG 397 IDKMLE+GVPQ+TLDRVAPGV+++D++++ GALDRAIPGLGK ++QNANAG++AGIN+LG Sbjct: 300 IDKMLEQGVPQATLDRVAPGVRAKDVNSVLGALDRAIPGLGKAVRQNANAGVAAGINALG 359 Query: 398 TEATLEGKKARSFPLRFADGAVFLGPLKVAQIPPLF 433 +A LEG+ AR+FPLRF DGAVF+GPL+V Q+PPLF Sbjct: 360 KDAVLEGRPARAFPLRFVDGAVFIGPLQVGQVPPLF 395 >ref|YP_576020.1| hypothetical protein Nham_0672 [Nitrobacter hamburgensis X14] gb|ABE61560.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 396 Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust. Identities = 248/398 (62%), Positives = 314/398 (78%), Gaps = 5/398 (1%) Query: 39 MSDQTSAPRRRSRFGLYAVPVAVLIAAVAWSAFWFFAASQVGVQADAWRAQEAKAGRVYD 98 M+ T AP + R+ ++ +PV V+IAA AWSAFWF+AASQV DAWRA+EA +GR+YD Sbjct: 1 MTATTVAPSKYRRWPIFVMPVLVVIAAAAWSAFWFYAASQVDQTVDAWRAREAASGRIYD 60 Query: 99 CGDRSVAGYPFRFEVRCTDPSVMLVSQTASPQMA---FVARLAEILVVAQVYDPKLVIAE 155 C R++ G+PFR EV C D +V L SQTA Q A ARL +ILV+AQ+Y PKL+IAE Sbjct: 61 CAKRTLGGFPFRLEVHCEDATVELKSQTAD-QAAIAPLTARLGDILVIAQIYTPKLLIAE 119 Query: 156 FKGPATIAERGAQPTLSVSWSKGRSSVVGLPAVPQRASLVFDDLAIDRTGGATPAPLARV 215 FK PAT+++ G QP + V+W RSS+VGLP PQ A +VFDDLAIDR P+AR Sbjct: 120 FKAPATLSQNG-QPVMVVNWKTARSSIVGLPGTPQSADIVFDDLAIDRIAAPAQTPVARA 178 Query: 216 NHIELHGRQVDGSAPDSPAIETVLQIAGGTLQDVHPLLAQPFNADIHARLNGLKDFSPKP 275 +H+ELHGR + S PD P IETVL++ G +L+DVHP+L +PF+A + A ++GLKDF+PKP Sbjct: 179 SHVELHGRIAENSKPDYPTIETVLELTGASLRDVHPVLTKPFDAVVRAMVHGLKDFTPKP 238 Query: 276 WPDRFREIQAAGGSVEIQQSRIEQGDVLSVAAGTLRLNAQGRIEGELQMTVAGLERVIPA 335 WP+RFRE+QAAGG VEI QSRI+QGD++++AAG+L L A GR++GEL MT G E+VIPA Sbjct: 239 WPERFREMQAAGGRVEIMQSRIQQGDLIAIAAGSLGLTANGRLDGELHMTATGFEKVIPA 298 Query: 336 LGIDKMLEEGVPQSTLDRVAPGVKSQDLSNLFGALDRAIPGLGKVIKQNANAGISAGINS 395 LGI+KMLE+GVPQ TLD+VAPGVK+QD+ NLFGALDRAIPGLGK +++NAN G++AG+ + Sbjct: 299 LGIEKMLEQGVPQDTLDKVAPGVKTQDIDNLFGALDRAIPGLGKAVRENANVGVAAGLAA 358 Query: 396 LGTEATLEGKKARSFPLRFADGAVFLGPLKVAQIPPLF 433 +G EATLEGKKARSFPLRF DGAVF+G LKVAQ PPLF Sbjct: 359 IGQEATLEGKKARSFPLRFVDGAVFVGSLKVAQTPPLF 396