BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0099.0007.p (329 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08628595.1| hypothetical protein CSIRO_1678 [Bradyrhizobi... 577 e-163 ref|NP_772850.1| hypothetical protein blr6210 [Bradyrhizobium ja... 576 e-162 ref|YP_567809.1| hypothetical protein RPD_0670 [Rhodopseudomonas... 558 e-157 ref|YP_004153201.1| hypothetical protein Varpa_0872 [Variovorax ... 189 6e-46 ref|ZP_04762026.1| conserved hypothetical protein [Acidovorax de... 184 2e-44 >ref|ZP_08628595.1| hypothetical protein CSIRO_1678 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08660.1| hypothetical protein CSIRO_1678 [Bradyrhizobiaceae bacterium SG-6C] Length = 346 Score = 577 bits (1488), Expect = e-163, Method: Compositional matrix adjust. Identities = 275/328 (83%), Positives = 299/328 (91%), Gaps = 1/328 (0%) Query: 1 MPATFSRRHVIAAGAAGAAMPFLSRGASAQAAWPSRQIRMICSYPAGGQTDLLARAFGEF 60 M A +RR I +G+A AMPFLSR +AQ AWPSRQIRM+CSYPAGGQTDLLARAFGEF Sbjct: 19 MSARITRRRFITSGSAVVAMPFLSRAGTAQGAWPSRQIRMVCSYPAGGQTDLLARAFGEF 78 Query: 61 IARQVGQTVVIENKAGASGSIGAAEVARAAPDGHTILCSISTTYVMNRAMMKNPGYDMDK 120 I + VGQTVV+ENKAGASGSIGA EVARAAPDGHTILCSISTTYVMNR MMKNPGYDMDK Sbjct: 79 IGKHVGQTVVVENKAGASGSIGAGEVARAAPDGHTILCSISTTYVMNRVMMKNPGYDMDK 138 Query: 121 DLTLVSVIPGAGLLLVASPKLGVKTLAEFVAYARSSGKVNFGTYSAGSAPHMTINELNKQ 180 DLTLVSVIPGAGLLLVASPK GVK+L +FVA+AR + KVNFGTYSAGSAPHMT+NELNKQ Sbjct: 139 DLTLVSVIPGAGLLLVASPKSGVKSLDDFVAFARKN-KVNFGTYSAGSAPHMTVNELNKQ 197 Query: 181 YGLTIEPIHYRGEAPMWTGLAEGTLDVAMGSYTAAQTVLQSNRGVVFGVHSKKVDAIPEI 240 YGL+IEP+HYRGEAPMWTGLAEGTLDVAMGSYTAAQ VLQ+N GV+F VHSKKVDAIP + Sbjct: 198 YGLSIEPVHYRGEAPMWTGLAEGTLDVAMGSYTAAQAVLQNNTGVLFAVHSKKVDAIPAV 257 Query: 241 RTLPEQGATSKFFTVSGFSGWALPKTTPQPIVDRLSEICVAANSDPKVKEVLATFVLEPA 300 +TLPEQGATSKFFTVSGFSGWALPK TPQPIVDRLSE+ VAAN+DPKVK VL TF LEPA Sbjct: 258 KTLPEQGATSKFFTVSGFSGWALPKATPQPIVDRLSELIVAANNDPKVKGVLTTFALEPA 317 Query: 301 IGFKDSNALYQRELPVWMEAAQSLGLPP 328 IGFK++NALYQRELPVWME+A+SLGL P Sbjct: 318 IGFKETNALYQRELPVWMESAKSLGLEP 345 >ref|NP_772850.1| hypothetical protein blr6210 [Bradyrhizobium japonicum USDA 110] dbj|BAC51475.1| blr6210 [Bradyrhizobium japonicum USDA 110] Length = 337 Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust. Identities = 270/337 (80%), Positives = 301/337 (89%), Gaps = 8/337 (2%) Query: 1 MPATFSRRHVIAAGAAGAAMPFLSRGASAQAA--------WPSRQIRMICSYPAGGQTDL 52 M A RRH +AAG AMPFL+R ASAQ WPSRQIRMICSYPAGGQTDL Sbjct: 1 MSAKLDRRHFVAAGTTALAMPFLARSASAQGTSQGTSQGTWPSRQIRMICSYPAGGQTDL 60 Query: 53 LARAFGEFIARQVGQTVVIENKAGASGSIGAAEVARAAPDGHTILCSISTTYVMNRAMMK 112 LARA+GEFI++QVG+TVVIENK GA+G+IG AEVARA PDGHTILCSISTTY+MNR +MK Sbjct: 61 LARAYGEFISKQVGKTVVIENKPGAAGAIGTAEVARAEPDGHTILCSISTTYIMNRVVMK 120 Query: 113 NPGYDMDKDLTLVSVIPGAGLLLVASPKLGVKTLAEFVAYARSSGKVNFGTYSAGSAPHM 172 NPGYDMDKDLTLVSVIPGAGLLLVA+PK GVKTL +FV +AR SGKVNFGTYSAGS+PHM Sbjct: 121 NPGYDMDKDLTLVSVIPGAGLLLVANPKTGVKTLEDFVTFARKSGKVNFGTYSAGSSPHM 180 Query: 173 TINELNKQYGLTIEPIHYRGEAPMWTGLAEGTLDVAMGSYTAAQTVLQSNRGVVFGVHSK 232 TINELNKQYGL IEP+HYRGEAPMWTG+ EGTLD AMGSYTAAQ+VLQS+RG VF VHSK Sbjct: 181 TINELNKQYGLNIEPVHYRGEAPMWTGILEGTLDAAMGSYTAAQSVLQSDRGTVFAVHSK 240 Query: 233 KVDAIPEIRTLPEQGATSKFFTVSGFSGWALPKTTPQPIVDRLSEICVAANSDPKVKEVL 292 KVDAIP I+TLPEQGATSKFFTVSGF+GWA+PK TPQP+VDRL+E+CVAAN+DPKVKEVL Sbjct: 241 KVDAIPAIKTLPEQGATSKFFTVSGFTGWAVPKATPQPVVDRLAELCVAANNDPKVKEVL 300 Query: 293 ATFVLEPAIGFKDSNALYQRELPVWMEAAQSLGLPPA 329 ATFVLEPAIGFK++NALYQRELP+W+E+A+SLGL PA Sbjct: 301 ATFVLEPAIGFKETNALYQRELPIWIESARSLGLEPA 337 >ref|YP_567809.1| hypothetical protein RPD_0670 [Rhodopseudomonas palustris BisB5] gb|ABE37908.1| Uncharacterized protein UPF0065 [Rhodopseudomonas palustris BisB5] Length = 329 Score = 558 bits (1438), Expect = e-157, Method: Compositional matrix adjust. Identities = 261/328 (79%), Positives = 293/328 (89%) Query: 1 MPATFSRRHVIAAGAAGAAMPFLSRGASAQAAWPSRQIRMICSYPAGGQTDLLARAFGEF 60 M A RRH IAAG AMP + RGASAQ AWPSR IRMICSYPAGGQTDLLARAFG+F Sbjct: 1 MSAKLDRRHFIAAGVTAIAMPSVLRGASAQEAWPSRSIRMICSYPAGGQTDLLARAFGDF 60 Query: 61 IARQVGQTVVIENKAGASGSIGAAEVARAAPDGHTILCSISTTYVMNRAMMKNPGYDMDK 120 +A+Q+ +TVVIENKAGASGSIG AEVARA PDGHTILCSISTT++MNR MMKNPGYDMDK Sbjct: 61 LAKQLDKTVVIENKAGASGSIGTAEVARAEPDGHTILCSISTTFLMNRVMMKNPGYDMDK 120 Query: 121 DLTLVSVIPGAGLLLVASPKLGVKTLAEFVAYARSSGKVNFGTYSAGSAPHMTINELNKQ 180 DLTL+SVIPG GLLLVAS K G+KTL +FVA+AR+SGKVNFGTYSAGSAPH+T+NEL KQ Sbjct: 121 DLTLISVIPGGGLLLVASAKHGIKTLDDFVAFARNSGKVNFGTYSAGSAPHITVNELKKQ 180 Query: 181 YGLTIEPIHYRGEAPMWTGLAEGTLDVAMGSYTAAQTVLQSNRGVVFGVHSKKVDAIPEI 240 YGL+IEPIHYRGEAPMWTGL EG+LDVAMGSYTAAQ LQ++RG VF VHSKKVDA+P I Sbjct: 181 YGLSIEPIHYRGEAPMWTGLLEGSLDVAMGSYTAAQAALQNDRGTVFAVHSKKVDALPAI 240 Query: 241 RTLPEQGATSKFFTVSGFSGWALPKTTPQPIVDRLSEICVAANSDPKVKEVLATFVLEPA 300 +TLPEQGAT+KFFTVSGF+GWA+PK TPQPIVDRL+++ VAAN DPKVK VLATF+LEPA Sbjct: 241 KTLPEQGATAKFFTVSGFTGWAVPKATPQPIVDRLAKLFVAANDDPKVKAVLATFMLEPA 300 Query: 301 IGFKDSNALYQRELPVWMEAAQSLGLPP 328 +GFKDSN LYQRELPVW+E+ Q+LGL P Sbjct: 301 LGFKDSNELYQRELPVWVESGQALGLQP 328 >ref|YP_004153201.1| hypothetical protein Varpa_0872 [Variovorax paradoxus EPS] gb|ADU35090.1| hypothetical protein Varpa_0872 [Variovorax paradoxus EPS] Length = 333 Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 107/298 (35%), Positives = 173/298 (58%), Gaps = 11/298 (3%) Query: 27 ASAQAAWPSRQIRMICSYPAGGQTDLLARAFGEFIARQVGQTVVIENKAGASGSIGAAEV 86 A AQA +P++ IR++ + AGG TD+LAR G+ ++ GQ VVI+NK GA+G IG V Sbjct: 28 AHAQAPYPNKPIRLVVPFQAGGATDVLARVLGQKMSAGFGQPVVIDNKPGAAGIIGTDAV 87 Query: 87 ARAAPDGHTILCSISTTYVMNRAMMKNPGYDMDKDLTLVSVIPGAGLLLVASPKLGVKTL 146 A++APDG+T++ S+S + N + + YD +DLTLV + L+LV P + VKT Sbjct: 88 AKSAPDGYTVVFSLSNALLTNEFLYEKLPYDTQRDLTLVYQVAMGPLVLVVHPSVPVKTA 147 Query: 147 AEFVAY-ARSSGKVNFGTYSAGSAPHMTINELNKQYGLTIEPIHYRGEAPMWTGLAEGTL 205 E + Y A + GKV +G+Y G+ PH+ ++ + + Y+GEAPM L G + Sbjct: 148 PELLKYVAANKGKVAYGSYGVGAYPHLAGAHMSLTQQADMNHVAYKGEAPMIQDLIGGQI 207 Query: 206 DVAMGSYTAAQTVLQSNRGVVFGVH-SKKVDAIPEIRTLPEQGATSKFFTVSGFSGWALP 264 +A S A+ + + + GV +++ A+P++ TL EQG + + V+G+ +A+P Sbjct: 208 QMAYASALVAKPHIDAGKVRAIGVSGERRMAALPDVPTLAEQGLKDEAYRVTGWLAFAVP 267 Query: 265 KTTPQPIVDRLSEICVAANSDPKVKEVLATFVLEPAIGFKDSN-----ALYQRELPVW 317 TP+PIVDR+++ A+ P V+E +A E +DS+ A +++E PVW Sbjct: 268 AKTPKPIVDRIADEVRKASQQPDVRERIAAMGFE----LRDSSPELFAAAWKQERPVW 321 >ref|ZP_04762026.1| conserved hypothetical protein [Acidovorax delafieldii 2AN] gb|EER61188.1| conserved hypothetical protein [Acidovorax delafieldii 2AN] Length = 334 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 106/322 (32%), Positives = 179/322 (55%), Gaps = 5/322 (1%) Query: 1 MPATFSRRHVIAAGAAGAAMPFL--SRGASAQAAWPSRQIRMICSYPAGGQTDLLARAFG 58 M F+RR V+ AA +L + SA++AWPS+ IR+I + AGG TD++AR G Sbjct: 1 MGIAFNRRSVLQGLAALGGSSWLGGAMAQSAKSAWPSKPIRLIVPFNAGGATDIIARTIG 60 Query: 59 EFIARQVGQTVVIENKAGASGSIGAAEVARAAPDGHTILCSISTTYVMNRAMMKNPGYDM 118 E +AR+VGQ VV++NK GA+G +G +A+A DG+T++ S+ST+ ++N+ + Y+ Sbjct: 61 EALARRVGQPVVVDNKGGAAGILGTDALAKAPADGYTLMVSLSTSMLINQFLYTKLPYNP 120 Query: 119 DKDLTLVSVIPGAGLLLVASPKLGVKTLAEFVAYARS-SGKVNFGTYSAGSAPHMTINEL 177 KDL ++S I A + LV P + + E +AY ++ GK+++G++ GS H+ + Sbjct: 121 QKDLLMLSQIAAAPVTLVVHPSVPANNMKELLAYVKARKGKLSYGSWGTGSYAHLAGAYM 180 Query: 178 NKQYGLTIEPIHYRGEAPMWTGLAEGTLDVAMGSYTAAQTVLQSNRGVVFGVHSK-KVDA 236 +K + + Y+GEAPM L G L + S + + + R GV K ++D Sbjct: 181 SKTMDADMAHVAYKGEAPMIQDLIGGQLQICFSSALNTKPFIDAGRLKAIGVTGKQRMDI 240 Query: 237 IPEIRTLPEQGATSKFFTVSGFSGWALPKTTPQPIVDRLSEICVAANSDPKVKEVLATFV 296 +P++ T+ EQG +++ G+ P P+ +VD+L DPKV E +A Sbjct: 241 LPKVPTIFEQGVQDDAYSLFGWVAMGAPAGVPKDVVDQLYGHLREIIKDPKVLERIAGAG 300 Query: 297 LEPAIGF-KDSNALYQRELPVW 317 +P + ++ YQR++P+W Sbjct: 301 FQPMMNSPQEFQQNYQRDMPIW 322