BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0099.0004.p         (100 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_768036.1| cyclohexadienyl dehydrogenase [Bradyrhizobium j...   196   1e-48
ref|YP_001237335.1| cyclohexadienyl dehydrogenase [Bradyrhizobiu...   189   2e-46
ref|YP_001208292.1| cyclohexadienyl dehydrogenase [Bradyrhizobiu...   187   3e-46
ref|ZP_08628515.1| cyclohexadienyl dehydrogenase [Bradyrhizobiac...   182   1e-44
ref|YP_317201.1| cyclohexadienyl dehydrogenase [Nitrobacter wino...   182   2e-44

>ref|NP_768036.1| cyclohexadienyl dehydrogenase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46661.1| prephenate dehydrogenase [Bradyrhizobium japonicum USDA 110]
          Length = 311

 Score =  196 bits (498), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 95/100 (95%), Positives = 97/100 (97%)

Query: 1   VTESEVIKFSAGGFRDFTRIAASDPTMWRDVFLANKDAVLEMLGTFNEDLSKLTRAIRRG 60
           VTESEVIKFSAGGFRDFTRIAASDPTMWRDVFLANK+AVLEMLGTF EDL+KLTRAIRRG
Sbjct: 211 VTESEVIKFSAGGFRDFTRIAASDPTMWRDVFLANKEAVLEMLGTFTEDLAKLTRAIRRG 270

Query: 61  DGEALFDHFTRTRAIRRGIVETGQDSAAPDFGRPHANLKK 100
           DGEALFDHFTRTRAIRRGIVE GQDSAAPDFGRPHA LKK
Sbjct: 271 DGEALFDHFTRTRAIRRGIVEIGQDSAAPDFGRPHAALKK 310


>ref|YP_001237335.1| cyclohexadienyl dehydrogenase [Bradyrhizobium sp. BTAi1]
 gb|ABQ33429.1| prephenate dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 311

 Score =  189 bits (479), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 91/100 (91%), Positives = 95/100 (95%)

Query: 1   VTESEVIKFSAGGFRDFTRIAASDPTMWRDVFLANKDAVLEMLGTFNEDLSKLTRAIRRG 60
           VTESEVIKFSAGGFRDFTRIAASDPTMWRD+FL+NKDAVL+MLGTF EDLSKLTRAIRRG
Sbjct: 211 VTESEVIKFSAGGFRDFTRIAASDPTMWRDIFLSNKDAVLDMLGTFTEDLSKLTRAIRRG 270

Query: 61  DGEALFDHFTRTRAIRRGIVETGQDSAAPDFGRPHANLKK 100
           DGEALFDHFTRTRAIRRGIVE GQDSAAPDFGRP   +KK
Sbjct: 271 DGEALFDHFTRTRAIRRGIVEVGQDSAAPDFGRPLPQIKK 310


>ref|YP_001208292.1| cyclohexadienyl dehydrogenase [Bradyrhizobium sp. ORS 278]
 emb|CAL80077.1| Protein tyrC: Cyclohexadienyl dehydrogenase (Arogenate
           dehydrogenase) (ADH); Prephenate dehydrogenase (PDH)
           [Bradyrhizobium sp. ORS 278]
          Length = 311

 Score =  187 bits (476), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 91/100 (91%), Positives = 95/100 (95%)

Query: 1   VTESEVIKFSAGGFRDFTRIAASDPTMWRDVFLANKDAVLEMLGTFNEDLSKLTRAIRRG 60
           VTESEVIKFSAGGFRDFTRIAASDPTMWRD+FL+NKDAVL+MLGTF EDLSKLTRAIRRG
Sbjct: 211 VTESEVIKFSAGGFRDFTRIAASDPTMWRDIFLSNKDAVLDMLGTFTEDLSKLTRAIRRG 270

Query: 61  DGEALFDHFTRTRAIRRGIVETGQDSAAPDFGRPHANLKK 100
           DGEALFDHFTRTRAIRRGIV+ GQDSAAPDFGRP   LKK
Sbjct: 271 DGEALFDHFTRTRAIRRGIVDIGQDSAAPDFGRPLPQLKK 310


>ref|ZP_08628515.1| cyclohexadienyl dehydrogenase [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP08839.1| cyclohexadienyl dehydrogenase [Bradyrhizobiaceae bacterium SG-6C]
          Length = 309

 Score =  182 bits (463), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 88/100 (88%), Positives = 93/100 (93%)

Query: 1   VTESEVIKFSAGGFRDFTRIAASDPTMWRDVFLANKDAVLEMLGTFNEDLSKLTRAIRRG 60
           VT++EV+KFSAGGFRDFTRIAASDPTMWRDVFLANKDAVLEMLG F EDLSKLTRAIRRG
Sbjct: 206 VTQAEVLKFSAGGFRDFTRIAASDPTMWRDVFLANKDAVLEMLGAFQEDLSKLTRAIRRG 265

Query: 61  DGEALFDHFTRTRAIRRGIVETGQDSAAPDFGRPHANLKK 100
           DGEALFDHFTRTRAIRRGIV  GQ++A PDFGR HANL K
Sbjct: 266 DGEALFDHFTRTRAIRRGIVNLGQETADPDFGRKHANLPK 305


>ref|YP_317201.1| cyclohexadienyl dehydrogenase [Nitrobacter winogradskyi Nb-255]
 gb|ABA03849.1| prephenate dehydrogenase [Nitrobacter winogradskyi Nb-255]
          Length = 311

 Score =  182 bits (462), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 88/100 (88%), Positives = 94/100 (94%)

Query: 1   VTESEVIKFSAGGFRDFTRIAASDPTMWRDVFLANKDAVLEMLGTFNEDLSKLTRAIRRG 60
           VT SEV+KFSAGGFRDFTRIAASDPTMWRDVFL NKDAVLEMLGTFNEDLSKLTRA+RRG
Sbjct: 211 VTSSEVMKFSAGGFRDFTRIAASDPTMWRDVFLTNKDAVLEMLGTFNEDLSKLTRAMRRG 270

Query: 61  DGEALFDHFTRTRAIRRGIVETGQDSAAPDFGRPHANLKK 100
           DGEALF+HFTRTRAIRRGIVE GQDSAAPDFGR   +++K
Sbjct: 271 DGEALFEHFTRTRAIRRGIVEIGQDSAAPDFGRLQTDVQK 310