BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0098.0029.p (162 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773167.1| hypothetical protein bll6527 [Bradyrhizobium ja... 269 1e-70 ref|YP_001583934.1| hypothetical protein Bmul_3959 [Burkholderia... 128 3e-28 ref|ZP_03569099.1| hypothetical membrane spanning protein [Burkh... 127 4e-28 ref|YP_001948930.1| probable membrane spanning protein [Burkhold... 127 5e-28 ref|YP_001630485.1| hypothetical protein Bpet1877 [Bordetella pe... 119 2e-25 >ref|NP_773167.1| hypothetical protein bll6527 [Bradyrhizobium japonicum USDA 110] dbj|BAC51792.1| bll6527 [Bradyrhizobium japonicum USDA 110] Length = 161 Score = 269 bits (687), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 131/158 (82%), Positives = 143/158 (90%) Query: 3 LSFNIAEQGEGPYRPLAILRWVMVVIFVSFGMQKFTLQSAQGIAQFISNSPFVSWLSMFG 62 + FN+AE G G YRPLAILRWVMVVIFVSFGMQKFTLQSAQGIAQFI+NSPF+SWLS+FG Sbjct: 2 MEFNVAENGGGSYRPLAILRWVMVVIFVSFGMQKFTLQSAQGIAQFITNSPFISWLSIFG 61 Query: 63 LRGEAYVLGVTEFGIAVLLAAGAFSPLLSAIGSLMGVITFAVTWSFFFTTPGVVKWSLST 122 LRGEAYVLGV EF IA LLAAG+FSP+LSA+GS MGV+TFA+TWSFFFTTPGVV WSLS+ Sbjct: 62 LRGEAYVLGVAEFAIAALLAAGSFSPVLSAVGSFMGVVTFAITWSFFFTTPGVVTWSLSS 121 Query: 123 DPMAWNLAGEFLFKDIVLLCVYLVLLLASLPRSIVRSR 160 DPMAWNL GEFLFKDIVLLCV VL LASLPRS +R R Sbjct: 122 DPMAWNLTGEFLFKDIVLLCVCAVLFLASLPRSAIRLR 159 >ref|YP_001583934.1| hypothetical protein Bmul_3959 [Burkholderia multivorans ATCC 17616] gb|ABX17642.1| protein of unknown function DUF417 [Burkholderia multivorans ATCC 17616] Length = 200 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 72/149 (48%), Positives = 96/149 (64%), Gaps = 1/149 (0%) Query: 5 FNIAEQGEGPYRPLAILRWVMVVIFVSFGMQKFTLQSAQGIAQFISNSPFVSWLSM-FGL 63 IAE+G G LA+LRW +VVIF+ FG KFT A GIA F+ NSP +SWL+ FG+ Sbjct: 42 LQIAEKGVGSLSLLALLRWALVVIFLWFGGMKFTGYEANGIAPFVVNSPIMSWLNASFGV 101 Query: 64 RGEAYVLGVTEFGIAVLLAAGAFSPLLSAIGSLMGVITFAVTWSFFFTTPGVVKWSLSTD 123 +G + V+GV E A L AGAF P+LSA+G+ M T+ +T +FF +TPGV + + Sbjct: 102 QGASNVIGVLELSTAAALIAGAFQPVLSALGAAMSAATYLITLTFFLSTPGVAEATAGGF 161 Query: 124 PMAWNLAGEFLFKDIVLLCVYLVLLLASL 152 P L G+FL KD+VLL L LL+AS+ Sbjct: 162 PAISALPGQFLLKDLVLLAASLCLLVASV 190 >ref|ZP_03569099.1| hypothetical membrane spanning protein [Burkholderia multivorans CGD2M] ref|ZP_03575746.1| hypothetical membrane spanning protein [Burkholderia multivorans CGD2] gb|EEE09089.1| hypothetical membrane spanning protein [Burkholderia multivorans CGD2] gb|EEE15006.1| hypothetical membrane spanning protein [Burkholderia multivorans CGD2M] Length = 185 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 72/149 (48%), Positives = 96/149 (64%), Gaps = 1/149 (0%) Query: 5 FNIAEQGEGPYRPLAILRWVMVVIFVSFGMQKFTLQSAQGIAQFISNSPFVSWLSM-FGL 63 IAE+G G LA+LRW +VVIF+ FG KFT A GIA F+ NSP +SWL+ FG+ Sbjct: 27 LQIAEKGVGSLSLLALLRWALVVIFLWFGGMKFTGYEANGIAPFVVNSPIMSWLNASFGV 86 Query: 64 RGEAYVLGVTEFGIAVLLAAGAFSPLLSAIGSLMGVITFAVTWSFFFTTPGVVKWSLSTD 123 +G + V+GV E A L AGAF P+LSA+G+ M T+ +T +FF +TPGV + + Sbjct: 87 QGASNVIGVLELSTAAALIAGAFQPVLSALGAAMSAATYLITLTFFLSTPGVAEATAGGF 146 Query: 124 PMAWNLAGEFLFKDIVLLCVYLVLLLASL 152 P L G+FL KD+VLL L LL+AS+ Sbjct: 147 PAISALPGQFLLKDLVLLAASLCLLVASV 175 >ref|YP_001948930.1| probable membrane spanning protein [Burkholderia multivorans ATCC 17616] dbj|BAG46394.1| probable membrane spanning protein [Burkholderia multivorans ATCC 17616] Length = 168 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 72/149 (48%), Positives = 96/149 (64%), Gaps = 1/149 (0%) Query: 5 FNIAEQGEGPYRPLAILRWVMVVIFVSFGMQKFTLQSAQGIAQFISNSPFVSWLSM-FGL 63 IAE+G G LA+LRW +VVIF+ FG KFT A GIA F+ NSP +SWL+ FG+ Sbjct: 10 LQIAEKGVGSLSLLALLRWALVVIFLWFGGMKFTGYEANGIAPFVVNSPIMSWLNASFGV 69 Query: 64 RGEAYVLGVTEFGIAVLLAAGAFSPLLSAIGSLMGVITFAVTWSFFFTTPGVVKWSLSTD 123 +G + V+GV E A L AGAF P+LSA+G+ M T+ +T +FF +TPGV + + Sbjct: 70 QGASNVIGVLELSTAAALIAGAFQPVLSALGAAMSAATYLITLTFFLSTPGVAEATAGGF 129 Query: 124 PMAWNLAGEFLFKDIVLLCVYLVLLLASL 152 P L G+FL KD+VLL L LL+AS+ Sbjct: 130 PAISALPGQFLLKDLVLLAASLCLLVASV 158 >ref|YP_001630485.1| hypothetical protein Bpet1877 [Bordetella petrii DSM 12804] emb|CAP42216.1| unnamed protein product [Bordetella petrii] Length = 168 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/157 (47%), Positives = 99/157 (63%), Gaps = 3/157 (1%) Query: 6 NIAEQGEGPYRPLAILRWVMVVIFVSFGMQKFTLQSAQGIAQFISNSPFVSWL-SMFGLR 64 IAE+G G LA+LRW +V++F+ FG KFT A GI FI++SP +SWL ++FG++ Sbjct: 11 QIAEKGAGSPAALALLRWALVIVFLWFGAMKFTAYEANGIGPFIAHSPIMSWLHALFGIQ 70 Query: 65 GEAYVLGVTEFGIAVLLAAGAFSPLLSAIGSLMGVITFAVTWSFFFTTPGVVKWSLSTDP 124 G +YV+GV E A L GAF P SA+G+ M T+ +T +FFFTTPGV + S P Sbjct: 71 GASYVIGVLELSTAAALVVGAFQPAFSALGAAMSAATYLITLTFFFTTPGVAEASAGGFP 130 Query: 125 MAWNLAGEFLFKDIVLLCVYLVLLLASLP--RSIVRS 159 G+FL KDIVLL L LL AS+P R VR+ Sbjct: 131 AISAAPGQFLLKDIVLLAASLCLLRASVPGLRPGVRN 167