BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0098.0023.p (334 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004676526.1| hypothetical protein HYPMC_2741 [Hyphomicrob... 269 5e-70 ref|YP_002424177.1| hypothetical protein Mchl_5509 [Methylobacte... 265 8e-69 ref|YP_001926384.1| hypothetical protein Mpop_3704 [Methylobacte... 264 1e-68 ref|YP_003756379.1| hypothetical protein Hden_2260 [Hyphomicrobi... 251 1e-64 ref|YP_002361732.1| hypothetical protein Msil_1405 [Methylocella... 249 6e-64 >ref|YP_004676526.1| hypothetical protein HYPMC_2741 [Hyphomicrobium sp. MC1] emb|CCB65958.1| conserved exported protein of unknown function [Hyphomicrobium sp. MC1] Length = 323 Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 142/296 (47%), Positives = 201/296 (67%), Gaps = 6/296 (2%) Query: 44 ETAPVGVP-DKSFPESVTSTSDGTLYVGSFNHGGVTKISGG--KAEQLVKPGAADSRSTL 100 + P+ +P D+++PES++++SDGT+Y+ S GGV ++ G KAE +KPGA +R+T Sbjct: 29 DMKPIEIPGDQAYPESMSASSDGTIYISSIASGGVARVKPGESKAEMWIKPGAFGTRNTF 88 Query: 101 GVLADEKSGTLYVCSNDISAMGVAGPSDTKGAWLKTFDLKSGAPKGSFALSDPKSFCNDI 160 GVL DEK+ TL+VCSNDISAMGV GPS GA+LK FDLK+G K S A CND+ Sbjct: 89 GVLVDEKTNTLWVCSNDISAMGVPGPSTVPGAYLKGFDLKTGEGKFSAAFPGKAHVCNDM 148 Query: 161 VVGADGTAYVSDSFAPFVYSLKPGGTALATFATDPQLAPAKDGVGLDGIAIGADGNLYVT 220 V+ +DGT YV+++ AP + LKPG L + + LAP K+G GLDGIA G+DGNLYV Sbjct: 149 VIASDGTMYVTNTAAPQILRLKPGAKELDVWLENDLLAP-KNGAGLDGIAFGSDGNLYVN 207 Query: 221 TFIPAKLFRIEMKDGKAGAVTELKPSQPLDHADALRA-HGGGFLLIEGNGKLDKITVKGS 279 T+ + FR+ +K+G G+VT+L+ S+P+ + DALR G FL+ EG G +D++TV G Sbjct: 208 TYGGNEFFRVTLKNGAPGSVTKLETSRPIQNPDALRPLDGNTFLMAEGGGTVDRVTVNGD 267 Query: 280 EATIDTIKDGLAEPVSVTQVGDVGWVAEGKLSYVIGDNKGKDPG-PFKLTPITLPK 334 + I+T+KDGL+ P SV +VGD WV EG+L+++ G + P PF+ P+ L K Sbjct: 268 KVDIETLKDGLSGPTSVARVGDTVWVGEGQLAHLFGAKENGPPKLPFQAVPVPLGK 323 >ref|YP_002424177.1| hypothetical protein Mchl_5509 [Methylobacterium chloromethanicum CM4] gb|ACK86249.1| conserved hypothetical protein [Methylobacterium chloromethanicum CM4] Length = 329 Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 155/310 (50%), Positives = 201/310 (64%), Gaps = 9/310 (2%) Query: 32 VLALGIAGAARA-ETAPVGVP---DKSFPESVTSTSDGTLYVGSFNHGGVTKIS-GGKAE 86 VLA I GAA AP +P D ++PES+TST+DGTLYV SF GGV ++ G +AE Sbjct: 17 VLAGSIGGAANTLSAAPESIPLPGDAAYPESITSTADGTLYVSSFASGGVLRVRPGAEAE 76 Query: 87 QLVKPGAADSRSTLGVLADEKSGTLYVCSNDISAMGVAGPSDTKGAWLKTFDLKSGAPKG 146 +KPGA ++RST GVLADEKSG L+VCSND+SA+GV GPS+ KGA LK FDL +G + Sbjct: 77 IWIKPGAFETRSTFGVLADEKSGILWVCSNDLSALGVKGPSEVKGAALKGFDLTTGEGRI 136 Query: 147 SFALSDPKSFCNDIVVGADGTAYVSDSFAPFVYSLKPGGTALATFATDPQLAPAKDGVGL 206 S + CNDI +G DG AYV+++ P + LKPG L + +DP AP GL Sbjct: 137 SAPFPVSPAICNDITIGPDGAAYVTNTLGPQILRLKPGSGTLEVWKSDPLFAPEGKEAGL 196 Query: 207 DGIAIGADGNLYVTTFIPAKLFRIEMKDGKAGAVTELKPSQPLDHADALRA-HGGGFLLI 265 DGIA G DG+LYV T+ A+LFRI + DG AGAVT L PS+ + AD LR G FL+ Sbjct: 197 DGIAFGKDGHLYVNTYTKAELFRIAVTDGVAGAVTPLTPSRVVVLADGLRPLEDGSFLMA 256 Query: 266 EGNGKLDKITVKGSEATIDTIKDGLAEPVS-VTQVGDVGWVAEGKLSYVI-GDNKGKDPG 323 EG G+LD+ITV+G A I+ +KD +A V+ VT+VG+ W+ G+L+ + KG P Sbjct: 257 EGGGRLDRITVEGDAARIEPLKDNIAGGVTGVTKVGNTAWITVGQLAALTDAAKKGAGPN 316 Query: 324 -PFKLTPITL 332 PF+L I L Sbjct: 317 LPFRLHAIPL 326 >ref|YP_001926384.1| hypothetical protein Mpop_3704 [Methylobacterium populi BJ001] gb|ACB81849.1| hypothetical protein Mpop_3704 [Methylobacterium populi BJ001] Length = 329 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 155/310 (50%), Positives = 201/310 (64%), Gaps = 9/310 (2%) Query: 32 VLALGIAGAARA-ETAPVGVP---DKSFPESVTSTSDGTLYVGSFNHGGVTKIS-GGKAE 86 VLA I GAA AP +P D ++PES+TST+DGTLYV SF GGV ++ G +AE Sbjct: 17 VLAGSIGGAANTLSAAPESIPLPGDAAYPESITSTADGTLYVSSFASGGVLRVRPGAEAE 76 Query: 87 QLVKPGAADSRSTLGVLADEKSGTLYVCSNDISAMGVAGPSDTKGAWLKTFDLKSGAPKG 146 +KPGA ++RST GVLADEKSG L+VCSND+SA+GV GPS+ KGA LK FDL +G + Sbjct: 77 IWIKPGAFETRSTFGVLADEKSGILWVCSNDLSALGVKGPSEVKGAALKGFDLTTGEGRI 136 Query: 147 SFALSDPKSFCNDIVVGADGTAYVSDSFAPFVYSLKPGGTALATFATDPQLAPAKDGVGL 206 S + CNDI +G DG AYV+++ P + LKPG L + +DP AP GL Sbjct: 137 SAPFPVSPAICNDITIGPDGAAYVTNTLGPQILRLKPGSGTLEVWKSDPLFAPEGKEAGL 196 Query: 207 DGIAIGADGNLYVTTFIPAKLFRIEMKDGKAGAVTELKPSQPLDHADALRA-HGGGFLLI 265 DGIA G DG+LYV T+ A+LFRI + DG AGAVT L PS+ + AD LR G FL+ Sbjct: 197 DGIAFGKDGHLYVNTYTKAELFRIAVTDGVAGAVTPLTPSRVVVLADGLRPLEDGSFLMA 256 Query: 266 EGNGKLDKITVKGSEATIDTIKDGLAEPVS-VTQVGDVGWVAEGKLSYVIGD-NKGKDPG 323 EG G+LD+ITV+G A I+ +KD +A V+ VT+VG+ W+ G+L+ + KG P Sbjct: 257 EGGGRLDRITVEGDAARIEPLKDNIAGGVTGVTKVGNTAWITVGQLAALTDQAKKGAGPD 316 Query: 324 -PFKLTPITL 332 PF+L I L Sbjct: 317 LPFRLHAIPL 326 >ref|YP_003756379.1| hypothetical protein Hden_2260 [Hyphomicrobium denitrificans ATCC 51888] gb|ADJ24058.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC 51888] Length = 310 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 132/298 (44%), Positives = 186/298 (62%), Gaps = 4/298 (1%) Query: 37 IAGAARAETAPVGVP-DKSFPESVTSTSDGTLYVGSFNHGGVTKISGGK--AEQLVKPGA 93 I+ A+ E V +P + +PES+ + SDGTLY+ GG+ ++ G AE+ +KPGA Sbjct: 9 ISTASAEEMKHVALPGNNVYPESIAAASDGTLYISGLASGGIYRVKPGASVAEEWIKPGA 68 Query: 94 ADSRSTLGVLADEKSGTLYVCSNDISAMGVAGPSDTKGAWLKTFDLKSGAPKGSFALSDP 153 D+RST GVL DE G L VCSND S +GV GP G ++K FDLK+G K S A Sbjct: 69 YDTRSTFGVLVDEAKGLLLVCSNDASGIGVPGPGAVPGTFIKGFDLKTGEGKLSVAFPKA 128 Query: 154 KSFCNDIVVGADGTAYVSDSFAPFVYSLKPGGTALATFATDPQLAPAKDGVGLDGIAIGA 213 S CND + DG+ + +++ +P + LKPG L + K+G GLDGIA G Sbjct: 129 GSICNDFAIAEDGSIFATNTSSPQILRLKPGSNELEVWLESADFNQPKEGAGLDGIAFGG 188 Query: 214 DGNLYVTTFIPAKLFRIEMKDGKAGAVTELKPSQPLDHADALRAHGG-GFLLIEGNGKLD 272 DGNLYV T+ A+L+R+++KDGK G +T+LK S+PL AD LR+ GG F++ EG+G +D Sbjct: 189 DGNLYVNTYTNAELYRVDVKDGKPGNITKLKTSRPLKLADGLRSTGGQSFIMAEGSGSID 248 Query: 273 KITVKGSEATIDTIKDGLAEPVSVTQVGDVGWVAEGKLSYVIGDNKGKDPGPFKLTPI 330 ++TV G EA ++TIK+GLA P SV VG+ WV EG+L+++ G PF++ I Sbjct: 249 RLTVNGDEANVETIKEGLAGPTSVALVGNTYWVPEGQLAHLFDAKSGPPTLPFRIVGI 306 >ref|YP_002361732.1| hypothetical protein Msil_1405 [Methylocella silvestris BL2] gb|ACK50370.1| conserved hypothetical protein [Methylocella silvestris BL2] Length = 325 Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 141/302 (46%), Positives = 184/302 (60%), Gaps = 4/302 (1%) Query: 30 AIVLALGIAGAARAETAPVGVPDKS-FPESVTSTSDGTLYVGSFNHGGVTKI--SGGKAE 86 A VL +G A A A + +P +PES+TS SDGTL+VGS GGV +I G+AE Sbjct: 14 AFVLLIGAPLPAPAAPATIDLPGADVYPESITSKSDGTLFVGSVAKGGVMRIPQEAGQAE 73 Query: 87 QLVKPGAADSRSTLGVLADEKSGTLYVCSNDISAMGVAGPSDTKGAWLKTFDLKSGAPKG 146 ++PGA SRS GVLAD+ S TL+VCSND S + GPS +G++LK FDL +GAPK Sbjct: 74 SFIEPGAFGSRSIFGVLADDASNTLWVCSNDASMLNTPGPSKVEGSFLKGFDLTTGAPKT 133 Query: 147 SFALSDPKSFCNDIVVGADGTAYVSDSFAPFVYSLKPGGTALATFATDPQLAPAKDGVGL 206 S L + CNDI +G G YV+++FAP + L L + D P K+G GL Sbjct: 134 SARLPGEHTLCNDIAIGPGGAVYVTNTFAPEILKLDRARDRLEVWLRDSLFEPPKNGGGL 193 Query: 207 DGIAIGADGNLYVTTFIPAKLFRIEMKDGKAGAVTELKPSQPLDHADALRA-HGGGFLLI 265 DGIA DGNLYV TF P +LFRI++K G +T L+ S+PL DALR FL+I Sbjct: 194 DGIAFDGDGNLYVNTFTPGELFRIDVKGGAPAKITRLQTSRPLTTPDALRRLDQSHFLMI 253 Query: 266 EGNGKLDKITVKGSEATIDTIKDGLAEPVSVTQVGDVGWVAEGKLSYVIGDNKGKDPGPF 325 EG+GKLD++TV G A I+TI DG P SVTQVG+ +V +G+L + + PF Sbjct: 254 EGDGKLDRVTVSGDSARIETIADGFGAPTSVTQVGETAFVTDGQLPGLFSGSGESPRLPF 313 Query: 326 KL 327 +L Sbjct: 314 RL 315