BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0098.0021.p (178 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772181.1| hypothetical protein blr5541 [Bradyrhizobium ja... 288 3e-76 ref|YP_004109014.1| beta-lactamase [Rhodopseudomonas palustris D... 274 3e-72 ref|NP_948152.1| beta-lactamase [Rhodopseudomonas palustris CGA0... 270 6e-71 ref|YP_001992128.1| beta-lactamase [Rhodopseudomonas palustris T... 268 3e-70 ref|YP_533344.1| beta-lactamase [Rhodopseudomonas palustris BisB... 249 9e-65 >ref|NP_772181.1| hypothetical protein blr5541 [Bradyrhizobium japonicum USDA 110] dbj|BAC50806.1| blr5541 [Bradyrhizobium japonicum USDA 110] Length = 422 Score = 288 bits (737), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 133/177 (75%), Positives = 151/177 (85%) Query: 1 MNDTGYVLGAETERTRLAEPLPSDTILIEGENDRRAHPEWESGGGGLVSTILDYARFAQM 60 M+ T + L E E R+A PLP+D IL+ E DR HPEW+SGGGGL+STI DY RF+QM Sbjct: 241 MSSTKFALATEDELARMARPLPNDYILLAAERDRLDHPEWQSGGGGLLSTINDYQRFSQM 300 Query: 61 LLNGGELDGKRYLSPAAFKTMTTDHIGPGSGVGRDYWYFPGDGFGYGYGIAVRTDPGIVK 120 LLN GE +G+RYLSPAAFK MTTDH+GPGSGVGRDY+YFPGDGFGYGYG+AVRTDPG K Sbjct: 301 LLNRGEFEGRRYLSPAAFKAMTTDHVGPGSGVGRDYFYFPGDGFGYGYGLAVRTDPGNAK 360 Query: 121 PPPPGSIGELKWDSGSGTYFGVDPKLDMIYIMLEQTQNERQRITPAFRKLVYDAFSP 177 PPPPGSIGELKWDSGSGTYFGVDPKLDM+Y+M++QTQNER RITPAF+ LVYD F P Sbjct: 361 PPPPGSIGELKWDSGSGTYFGVDPKLDMVYLMMQQTQNERSRITPAFKALVYDCFPP 417 >ref|YP_004109014.1| beta-lactamase [Rhodopseudomonas palustris DX-1] gb|ADU44281.1| beta-lactamase [Rhodopseudomonas palustris DX-1] Length = 439 Score = 274 bits (701), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 126/176 (71%), Positives = 146/176 (82%) Query: 1 MNDTGYVLGAETERTRLAEPLPSDTILIEGENDRRAHPEWESGGGGLVSTILDYARFAQM 60 M TG+VL E ER RLAEP P+D +L++ E RRAH EW+SGGGGL+ST DYARFAQM Sbjct: 253 MTSTGFVLRTEAERMRLAEPFPADKVLVDSERQRRAHAEWQSGGGGLLSTATDYARFAQM 312 Query: 61 LLNGGELDGKRYLSPAAFKTMTTDHIGPGSGVGRDYWYFPGDGFGYGYGIAVRTDPGIVK 120 LL GG LDG+RYLSPAA++ MTTD IGP SGV RDY+YFPGDGFGYGYG+AVR +PG Sbjct: 313 LLEGGALDGRRYLSPAAYRAMTTDQIGPVSGVERDYFYFPGDGFGYGYGLAVRVEPGEAS 372 Query: 121 PPPPGSIGELKWDSGSGTYFGVDPKLDMIYIMLEQTQNERQRITPAFRKLVYDAFS 176 PP PGSIGELKWDSGSGTYFGVDP LDMIYI+++QT+ ER R+ PAF+ LVYDAF+ Sbjct: 373 PPAPGSIGELKWDSGSGTYFGVDPSLDMIYILMQQTETERGRVVPAFKTLVYDAFA 428 >ref|NP_948152.1| beta-lactamase [Rhodopseudomonas palustris CGA009] emb|CAE28251.1| Beta-lactamase [Rhodopseudomonas palustris CGA009] Length = 430 Score = 270 bits (690), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 124/176 (70%), Positives = 145/176 (82%) Query: 1 MNDTGYVLGAETERTRLAEPLPSDTILIEGENDRRAHPEWESGGGGLVSTILDYARFAQM 60 M T +VL E E+ R+A P+DT+L + E RRAHPEW+SGGGGL+ST+ DYARFAQM Sbjct: 252 MTSTSFVLRTEAEQERMAAVFPTDTVLADAERQRRAHPEWQSGGGGLLSTVTDYARFAQM 311 Query: 61 LLNGGELDGKRYLSPAAFKTMTTDHIGPGSGVGRDYWYFPGDGFGYGYGIAVRTDPGIVK 120 LL GG LDG+RYLS AAFK MTTD IGPGSGV RDY+YFPGDGFGYGYG+AVR +PG Sbjct: 312 LLEGGVLDGRRYLSAAAFKAMTTDQIGPGSGVERDYFYFPGDGFGYGYGLAVRVEPGEAT 371 Query: 121 PPPPGSIGELKWDSGSGTYFGVDPKLDMIYIMLEQTQNERQRITPAFRKLVYDAFS 176 PP PGSIGELKWDSGSGTYFGVDP LDMIY++++QT+ ER R+ P F+KLVYDAF+ Sbjct: 372 PPAPGSIGELKWDSGSGTYFGVDPSLDMIYVLMQQTETERGRVVPMFKKLVYDAFA 427 >ref|YP_001992128.1| beta-lactamase [Rhodopseudomonas palustris TIE-1] gb|ACF01653.1| beta-lactamase [Rhodopseudomonas palustris TIE-1] Length = 430 Score = 268 bits (685), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 123/176 (69%), Positives = 145/176 (82%) Query: 1 MNDTGYVLGAETERTRLAEPLPSDTILIEGENDRRAHPEWESGGGGLVSTILDYARFAQM 60 M T +VL E E+ R+A P+DT+L + E R AHPEW+SGGGGL+ST++DYARFAQM Sbjct: 252 MTSTSFVLRTEAEQARMAAVFPTDTVLADAERQRGAHPEWQSGGGGLLSTVIDYARFAQM 311 Query: 61 LLNGGELDGKRYLSPAAFKTMTTDHIGPGSGVGRDYWYFPGDGFGYGYGIAVRTDPGIVK 120 LL GG LDG+RYLS AAFK MTTD IGPGSGV RDY+YFPGDGFGYGYG+AVR +PG Sbjct: 312 LLEGGVLDGRRYLSAAAFKAMTTDQIGPGSGVERDYFYFPGDGFGYGYGLAVRVEPGEAT 371 Query: 121 PPPPGSIGELKWDSGSGTYFGVDPKLDMIYIMLEQTQNERQRITPAFRKLVYDAFS 176 PP PGSIGELKWDSGSGTYFGVDP LDMIY++++QT+ ER R+ P F+KLVYDAF+ Sbjct: 372 PPAPGSIGELKWDSGSGTYFGVDPSLDMIYVLMQQTETERGRVVPEFKKLVYDAFA 427 >ref|YP_533344.1| beta-lactamase [Rhodopseudomonas palustris BisB18] gb|ABD89025.1| beta-lactamase [Rhodopseudomonas palustris BisB18] Length = 440 Score = 249 bits (637), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 116/174 (66%), Positives = 141/174 (81%) Query: 1 MNDTGYVLGAETERTRLAEPLPSDTILIEGENDRRAHPEWESGGGGLVSTILDYARFAQM 60 M T + + +R R+AEPLP D IL E RRAHPEW+SGGGGLVST DYARFAQM Sbjct: 262 MTSTSFGMSDPADRARMAEPLPGDGILQRSEAMRRAHPEWQSGGGGLVSTAPDYARFAQM 321 Query: 61 LLNGGELDGKRYLSPAAFKTMTTDHIGPGSGVGRDYWYFPGDGFGYGYGIAVRTDPGIVK 120 LL+GG DG+R +S AAFK MT+D IGPGSGV RD++YFPGDGFG+GYG+AVR +PG + Sbjct: 322 LLDGGVWDGRRLISEAAFKAMTSDQIGPGSGVARDFFYFPGDGFGFGYGLAVRVEPGTAR 381 Query: 121 PPPPGSIGELKWDSGSGTYFGVDPKLDMIYIMLEQTQNERQRITPAFRKLVYDA 174 PPPPGS+GELKWDSGSGT FGVDPKLDM++++++QTQ ER + T AF+KL+YDA Sbjct: 382 PPPPGSLGELKWDSGSGTLFGVDPKLDMVFVLMQQTQAERGKNTVAFKKLLYDA 435