BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0098.0018.p         (137 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773255.1| hypothetical protein bll6615 [Bradyrhizobium ja...   181   5e-44
ref|NP_771753.1| hypothetical protein blr5113 [Bradyrhizobium ja...   143   1e-32
ref|YP_532110.1| hypothetical protein RPC_2237 [Rhodopseudomonas...   143   1e-32
ref|YP_782293.1| hypothetical protein RPE_3381 [Rhodopseudomonas...   140   7e-32
ref|YP_001773358.1| hypothetical protein M446_6673 [Methylobacte...   138   2e-31

>ref|NP_773255.1| hypothetical protein bll6615 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51880.1| bll6615 [Bradyrhizobium japonicum USDA 110]
          Length = 169

 Score =  181 bits (458), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 92/122 (75%), Positives = 106/122 (86%)

Query: 2   TETVSLSKAMWRGFTMKCPNCGRGHLFGRFLKVADHCEACGEDFTPQRADDFPAYLVIVV 61
           T +VSL+KAMWRGF  KCPNCG GH+FGRFLKVAD C+ CGE+   QRADDFPAYLV+VV
Sbjct: 30  TGSVSLAKAMWRGFRGKCPNCGEGHMFGRFLKVADSCDHCGEELFHQRADDFPAYLVMVV 89

Query: 62  VGHVVVPALLWLEMNYAPPAWLQLAIWLPVTLFSALALLQPTKGAIVGLQWQLGMEGFAA 121
           VGH+VVPA+L +E  YAPP WLQLA+WLPVTLF++LALLQPTKGAIVGLQWQ+GM GF A
Sbjct: 90  VGHLVVPAILAVETAYAPPVWLQLAVWLPVTLFASLALLQPTKGAIVGLQWQIGMHGFEA 149

Query: 122 TR 123
            +
Sbjct: 150 GK 151


>ref|NP_771753.1| hypothetical protein blr5113 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50378.1| blr5113 [Bradyrhizobium japonicum USDA 110]
          Length = 146

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/119 (63%), Positives = 86/119 (72%)

Query: 1   MTETVSLSKAMWRGFTMKCPNCGRGHLFGRFLKVADHCEACGEDFTPQRADDFPAYLVIV 60
           + E   +  AM RGF  +CP CG G LF  FLK ADHC ACG DFTP RADD PAYLVIV
Sbjct: 17  LVEKRDVWTAMKRGFRGRCPRCGEGKLFRAFLKTADHCSACGLDFTPHRADDLPAYLVIV 76

Query: 61  VVGHVVVPALLWLEMNYAPPAWLQLAIWLPVTLFSALALLQPTKGAIVGLQWQLGMEGF 119
           +VGH+VVP +LW+E NY  P WL  A +LP T F++LALLQP KGA+VGLQW L M GF
Sbjct: 77  IVGHIVVPGILWIETNYTTPVWLSFAAYLPFTFFASLALLQPVKGAVVGLQWALRMHGF 135


>ref|YP_532110.1| hypothetical protein RPC_2237 [Rhodopseudomonas palustris BisB18]
 gb|ABD87791.1| protein of unknown function DUF983 [Rhodopseudomonas palustris
           BisB18]
          Length = 149

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/117 (60%), Positives = 83/117 (70%)

Query: 3   ETVSLSKAMWRGFTMKCPNCGRGHLFGRFLKVADHCEACGEDFTPQRADDFPAYLVIVVV 62
           E  +   A+ RG   +CP CG G LF  FLKV DHC  C  DFTP RADD PAYLVIV+V
Sbjct: 22  EKRNAVTAIKRGLFGRCPRCGEGKLFRAFLKVDDHCAKCQLDFTPHRADDLPAYLVIVIV 81

Query: 63  GHVVVPALLWLEMNYAPPAWLQLAIWLPVTLFSALALLQPTKGAIVGLQWQLGMEGF 119
           GH+VVP +LW+E NY+P   LQLAI+LP+TL  +L LLQP KGA+VGLQW   M GF
Sbjct: 82  GHLVVPIVLWIETNYSPAVPLQLAIYLPITLLLSLGLLQPVKGAVVGLQWAFRMHGF 138


>ref|YP_782293.1| hypothetical protein RPE_3381 [Rhodopseudomonas palustris BisA53]
 gb|ABJ07313.1| protein of unknown function DUF983 [Rhodopseudomonas palustris
           BisA53]
          Length = 149

 Score =  140 bits (352), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 74/117 (63%), Positives = 87/117 (74%)

Query: 3   ETVSLSKAMWRGFTMKCPNCGRGHLFGRFLKVADHCEACGEDFTPQRADDFPAYLVIVVV 62
           E  ++  AM RG   +CP CG G LF  FLK ADHC ACG+DF+P RADD PAYLVIV+V
Sbjct: 22  EKRNVFAAMKRGALGRCPRCGEGKLFRAFLKTADHCSACGQDFSPHRADDLPAYLVIVIV 81

Query: 63  GHVVVPALLWLEMNYAPPAWLQLAIWLPVTLFSALALLQPTKGAIVGLQWQLGMEGF 119
           GH+VVP  LW+E NY+P  WLQLAI+LP TL ++L LLQP KGA+VGLQW   M GF
Sbjct: 82  GHIVVPLALWIETNYSPEVWLQLAIYLPFTLVASLLLLQPVKGAVVGLQWAFRMHGF 138


>ref|YP_001773358.1| hypothetical protein M446_6673 [Methylobacterium sp. 4-46]
 gb|ACA20924.1| protein of unknown function DUF983 [Methylobacterium sp. 4-46]
          Length = 170

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/117 (59%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 10  AMWRGFTMKCPNCGRGHLFGRFLKVADHCEACGEDFTPQRADDFPAYLVIVVVGHVVVPA 69
           AM RGF  +CP+CG G LFGRFLKV + CEACG +    RADD P YLVI +VGHVV  A
Sbjct: 22  AMLRGFRNRCPHCGEGRLFGRFLKVREACEACGTELHHHRADDLPPYLVIFIVGHVVGLA 81

Query: 70  LLWLEMNYAP-PAWLQLAIWLPVTLFSALALLQPTKGAIVGLQWQLGMEGFAATRRA 125
           +L  +M     P W +L  W  VTL  ALALLQP KGA+VGLQ+ LGM GF+A RRA
Sbjct: 82  ILESQMRLDELPLWFELTFWPAVTLIMALALLQPVKGAVVGLQYALGMHGFSAIRRA 138