BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0098.0014.p (211 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769548.1| hypothetical protein bll2908 [Bradyrhizobium ja... 339 2e-91 ref|YP_004489299.1| Asp/Glu racemase [Delftia sp. Cs1-4] >gi|333... 254 7e-66 ref|YP_001563824.1| Asp/Glu racemase [Delftia acidovorans SPH-1]... 253 9e-66 ref|ZP_06896838.1| Asp/Glu racemase [Roseomonas cervicalis ATCC ... 251 6e-65 ref|YP_004235171.1| Asp/Glu/hydantoin racemase [Acidovorax avena... 224 7e-57 >ref|NP_769548.1| hypothetical protein bll2908 [Bradyrhizobium japonicum USDA 110] dbj|BAC48173.1| bll2908 [Bradyrhizobium japonicum USDA 110] Length = 212 Score = 339 bits (869), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 165/209 (78%), Positives = 182/209 (87%) Query: 1 MRITLIHALKHSIVPIEASFARHWPDARLMNLLDDSLSADLAHDGKLTDRMTERFLTMGR 60 MRI LIHALKHSI PIEA+FA WP+ARLMNLLDDSLSADLA DG+LTD MTERFL +G Sbjct: 1 MRIALIHALKHSIAPIEAAFATAWPEARLMNLLDDSLSADLARDGQLTDAMTERFLALGD 60 Query: 61 YAVGTGANGILFTCSAFGPCIEAVAREHAPMPVLKPNEAMIEQAVAKGQRIGLLSTFPPT 120 YA TGAN ILFTCSAFGPCIEAVAR HAPMPVLKPNEAMIE+AV G+RIGLLSTFPPT Sbjct: 61 YAGATGANAILFTCSAFGPCIEAVARAHAPMPVLKPNEAMIERAVTMGKRIGLLSTFPPT 120 Query: 121 LVSMPPEFPSQVTLVPKLAEGALAALDRGDRAEHDRIVVEAARDLRDCDLIALAQYSMAP 180 LVSMPPEFP+ V +VPKLAEGALAALDRGDR HDR++VEA+RDLRDCD+IALAQ+S+A Sbjct: 121 LVSMPPEFPASVQIVPKLAEGALAALDRGDRTTHDRLIVEASRDLRDCDVIALAQFSIAA 180 Query: 181 AAERVAEVTGREVLTTPDSAVKKLKAMLG 209 A VAE TGR V+TTPDSAV+KL +L Sbjct: 181 TAPLVAEATGRPVVTTPDSAVEKLMKLLA 209 >ref|YP_004489299.1| Asp/Glu racemase [Delftia sp. Cs1-4] gb|AEF90944.1| Asp/Glu racemase [Delftia sp. Cs1-4] Length = 218 Score = 254 bits (648), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 137/214 (64%), Positives = 161/214 (75%), Gaps = 6/214 (2%) Query: 2 RITLIHALKHSIVPIEASFARHWPDARLMNLLDDSLSADLAHDGKLTDR-MTERFLTMGR 60 RI LIHAL HS+ PI +FAR WP+A MNLLDDSLSADLA +G+ D M ERF + + Sbjct: 3 RIALIHALSHSVAPINEAFARDWPEAVRMNLLDDSLSADLARNGRGLDAAMHERFQRLAQ 62 Query: 61 YAVGTGANGILFTCSAFGPCIEAVAREHAPMPVLKPNEAMIEQAVAKGQR--IGLLSTFP 118 YAV TGA GILFTCSAFGPCIEAVA HAP+PVLKPNEAMIE+AV +GQ+ +GL+S+F Sbjct: 63 YAVDTGAQGILFTCSAFGPCIEAVAARHAPLPVLKPNEAMIEEAV-QGQQGALGLISSFA 121 Query: 119 PTLVSMPPEFPSQVTLVPKLAEGALAALDRGDRAEHDRIVVEAARDL--RDCDLIALAQY 176 PTL SMPPEFP+ + LVP LA+GA+ AL+RGD A HDR+VVE AR L R C IALAQ+ Sbjct: 122 PTLQSMPPEFPAGIELVPALADGAMDALNRGDTATHDRLVVEQARALAARGCTRIALAQF 181 Query: 177 SMAPAAERVAEVTGREVLTTPDSAVKKLKAMLGI 210 SMA A TG VLTT DSAV+ L+ LG+ Sbjct: 182 SMARARAACEAATGLPVLTTVDSAVRALQRRLGV 215 >ref|YP_001563824.1| Asp/Glu racemase [Delftia acidovorans SPH-1] gb|ABX35439.1| Asp/Glu racemase [Delftia acidovorans SPH-1] Length = 218 Score = 253 bits (647), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 137/214 (64%), Positives = 161/214 (75%), Gaps = 6/214 (2%) Query: 2 RITLIHALKHSIVPIEASFARHWPDARLMNLLDDSLSADLAHDGKLTDR-MTERFLTMGR 60 RI LIHAL HS+ PI +FAR WP+A MNLLDDSLSADLA +G+ D M ERF + + Sbjct: 3 RIALIHALSHSVAPINEAFARDWPEAVRMNLLDDSLSADLARNGRGLDAAMHERFQRLAQ 62 Query: 61 YAVGTGANGILFTCSAFGPCIEAVAREHAPMPVLKPNEAMIEQAVAKGQR--IGLLSTFP 118 YAV TGA GILFTCSAFGPCIEAVA HAP+PVLKPNEAMIE+AV +GQ+ +GL+S+F Sbjct: 63 YAVDTGAQGILFTCSAFGPCIEAVAARHAPLPVLKPNEAMIEEAV-QGQQGALGLISSFA 121 Query: 119 PTLVSMPPEFPSQVTLVPKLAEGALAALDRGDRAEHDRIVVEAARDL--RDCDLIALAQY 176 PTL SMPPEFP+ + LVP LA+GA+ AL+RGD A HDR+VVE AR L R C IALAQ+ Sbjct: 122 PTLQSMPPEFPAGIELVPALADGAMDALNRGDTATHDRLVVEQARVLAARGCTRIALAQF 181 Query: 177 SMAPAAERVAEVTGREVLTTPDSAVKKLKAMLGI 210 SMA A TG VLTT DSAV+ L+ LG+ Sbjct: 182 SMARARAACEAATGLPVLTTVDSAVRALQRRLGV 215 >ref|ZP_06896838.1| Asp/Glu racemase [Roseomonas cervicalis ATCC 49957] gb|EFH11459.1| Asp/Glu racemase [Roseomonas cervicalis ATCC 49957] Length = 220 Score = 251 bits (640), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 151/211 (71%), Positives = 173/211 (81%), Gaps = 3/211 (1%) Query: 1 MRITLIHALKHSIVPIEASFARHWPDARLMNLLDDSLSADLAHDGKLTDRMTERFLTMGR 60 MRI LIHAL+HS P+EA+FAR WP+ARLMNLLDDSLSADLA G+LT+ MT RFL++ R Sbjct: 1 MRIALIHALRHSPPPVEAAFARLWPEARLMNLLDDSLSADLARQGRLTEAMTGRFLSLAR 60 Query: 61 YAVGTGANGILFTCSAFGPCIEAVAREHAPMPVLKPNEAMIEQAVAKG---QRIGLLSTF 117 YAV TGA GILFTCSAFGPCIEAV RE AP+PVLKPNEAMIE+A+A R+GLL++F Sbjct: 61 YAVETGAQGILFTCSAFGPCIEAVQRELAPLPVLKPNEAMIEEALAAAGPSGRVGLLASF 120 Query: 118 PPTLVSMPPEFPSQVTLVPKLAEGALAALDRGDRAEHDRIVVEAARDLRDCDLIALAQYS 177 PTL SMPPEFP+ + LVPKLAEGALAALD GD A HDR+ AARDL CD+IALAQ+S Sbjct: 121 APTLASMPPEFPAGLRLVPKLAEGALAALDAGDAAGHDRLAARAARDLAGCDVIALAQFS 180 Query: 178 MAPAAERVAEVTGREVLTTPDSAVKKLKAML 208 +A AA VA TGR VLTTPDSAV+KL+ ML Sbjct: 181 LASAAPGVAAATGRPVLTTPDSAVRKLRRML 211 >ref|YP_004235171.1| Asp/Glu/hydantoin racemase [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX46604.1| Asp/Glu/hydantoin racemase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 214 Score = 224 bits (571), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 127/211 (60%), Positives = 149/211 (70%), Gaps = 3/211 (1%) Query: 2 RITLIHALKHSIVPIEASFARHWPDARLMNLLDDSLSADLAHDGKLTDR-MTERFLTMGR 60 RI LIHAL HS+ PI +F R WP A MNLLDDSLSADLA G D M ERF+ + R Sbjct: 3 RIALIHALAHSVAPINGAFERDWPQAVRMNLLDDSLSADLAAGGGGLDGAMHERFVRLAR 62 Query: 61 YAVGTGANGILFTCSAFGPCIEAVAREHAPMPVLKPNEAMIEQAVAKGQRIGLLSTFPPT 120 YAV TGA GILFTCSAFGPCI+AVAR HAPMPVL+PNEAMI++AV +GL++TF PT Sbjct: 63 YAVDTGAEGILFTCSAFGPCIDAVARTHAPMPVLRPNEAMIDEAVQGAGPLGLVATFAPT 122 Query: 121 LVSMPPEFPSQVTLVPKLAEGALAALDRGDRAEHDRIVVEAARDL--RDCDLIALAQYSM 178 L SMP EFP L LAEGAL AL+ GD HD ++ AR L R C IALAQ+SM Sbjct: 123 LRSMPAEFPPGTALETALAEGALDALNAGDGPAHDALIARQARALAERGCTRIALAQFSM 182 Query: 179 APAAERVAEVTGREVLTTPDSAVKKLKAMLG 209 A A + A+ +G VLTT DSAV++L+ +LG Sbjct: 183 ARARDACAQASGLPVLTTVDSAVRRLRGLLG 213