BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0098.0010.p (474 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773198.1| oxidoreductase [Bradyrhizobium japonicum USDA 1... 862 0.0 ref|YP_001241964.1| putative D-lactate dehydrogenase [Bradyrhizo... 832 0.0 ref|YP_001207498.1| putative D-lactate dehydrogenase [Bradyrhizo... 827 0.0 ref|YP_570489.1| FAD linked oxidase-like protein [Rhodopseudomon... 821 0.0 ref|YP_485645.1| D-lactate dehydrogenase (cytochrome) [Rhodopseu... 817 0.0 >ref|NP_773198.1| oxidoreductase [Bradyrhizobium japonicum USDA 110] dbj|BAC51823.1| oxidoreductase [Bradyrhizobium japonicum USDA 110] Length = 474 Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/474 (89%), Positives = 446/474 (94%) Query: 1 VATTISSTVTRPEPQALKRAIDALAARFGNRLVTSQAVREQHAHTTTWLPTQPPDAVVMA 60 + TTI++ RPEP+AL A++ LAARFGNRL+TSQAVREQH HTTTW+P QPPD VVMA Sbjct: 1 MGTTITNNPPRPEPKALASALEQLAARFGNRLITSQAVREQHGHTTTWIPNQPPDGVVMA 60 Query: 61 QETADIQDVVRICAANRVPVIAFGTGTSLEGQVNAPAGGICIDLRDMNKVLEVHAEDLDC 120 QETADIQDVVRICA NRVPVIAFGTGTSLEGQVNAPAGGI IDLRDMNKVL VH EDLDC Sbjct: 61 QETADIQDVVRICARNRVPVIAFGTGTSLEGQVNAPAGGISIDLRDMNKVLAVHTEDLDC 120 Query: 121 VIQPGVTRKALNEHLRDQGLFFPIDPGADASLGGMTSTRASGTNAVRYGTMRENVLALKV 180 VIQPGVTRKALNEHLRDQGLFFPIDPGADASLGGM STRASGTNAVRYGTMR++VLALKV Sbjct: 121 VIQPGVTRKALNEHLRDQGLFFPIDPGADASLGGMASTRASGTNAVRYGTMRDSVLALKV 180 Query: 181 VRGDGEIITTGTRAKKSSAGYDLTHLFVGAEGTLGIISELTIRLRGIPDTIAAAACSFDT 240 VRGDGEIITTGTRAKKSSAGYDLTHLFVGAEGTLGIISELTIRLRGIPDTIAA A SF+T Sbjct: 181 VRGDGEIITTGTRAKKSSAGYDLTHLFVGAEGTLGIISELTIRLRGIPDTIAAGAVSFET 240 Query: 241 VRGACQATILAIQTGIPVARIELLNAAQVKACNSYSKLSLPETPLLLLEFHGSEVEVAEQ 300 V GACQA ILAIQTGIPVARIELLNAAQVKACN+YSKL+LPETPLLL+EFHGSE+EVAEQ Sbjct: 241 VHGACQAVILAIQTGIPVARIELLNAAQVKACNAYSKLTLPETPLLLMEFHGSEIEVAEQ 300 Query: 301 SKNFRDIAAECGGGDFTWTTKPEDRTKLWQARHDAYWSVKALRPGDSIGVVATDVCVPIS 360 SK F +IA ECGGGDF+WTTKPEDRTKLWQARHDAYWSVKALRPGDSIGVVATDVCVPIS Sbjct: 301 SKAFGEIAKECGGGDFSWTTKPEDRTKLWQARHDAYWSVKALRPGDSIGVVATDVCVPIS 360 Query: 361 RLADCVTETEDDLKRLNLLSPIVGHVGDGNFHCSLLCDVNDKDEMARGEEFMHRLVERAQ 420 RLA+CV ETE+DLKRLNLLSPIVGHVGDGNFHCSL+CD ND DEMARGEEFMHRLVERAQ Sbjct: 361 RLAECVGETEEDLKRLNLLSPIVGHVGDGNFHCSLVCDTNDADEMARGEEFMHRLVERAQ 420 Query: 421 AMDGTCTGEHGIGQGKQKYLQAELGPEALDAMRALKHALDPQNIFNPGKIVPAA 474 AMDGTCTGEHGIGQGKQKYL+AELGPEALDAMRALK ALDP NIFNPGKIVP A Sbjct: 421 AMDGTCTGEHGIGQGKQKYLKAELGPEALDAMRALKQALDPLNIFNPGKIVPEA 474 >ref|YP_001241964.1| putative D-lactate dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ38058.1| putative D-lactate dehydrogenase (D-lactate ferricytochrome C oxidoreductase) [Bradyrhizobium sp. BTAi1] Length = 473 Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/474 (87%), Positives = 444/474 (93%), Gaps = 3/474 (0%) Query: 1 VATTI-SSTVTRPEPQALKRAIDALAARFGNRLVTSQAVREQHAHTTTWLPTQPPDAVVM 59 +ATT+ + RP P+ALK A+DALAARFGNRL+TSQAVREQH HTTTWLPTQPPD VV+ Sbjct: 1 MATTLPHHDLKRPAPEALKSALDALAARFGNRLITSQAVREQHGHTTTWLPTQPPDGVVL 60 Query: 60 AQETADIQDVVRICAANRVPVIAFGTGTSLEGQVNAPAGGICIDLRDMNKVLEVHAEDLD 119 AQETADIQDVVRICAA VP+I FGTGTSLEGQVNAPAGGICIDLRD+NKVLEVHAEDLD Sbjct: 61 AQETADIQDVVRICAARGVPIIPFGTGTSLEGQVNAPAGGICIDLRDVNKVLEVHAEDLD 120 Query: 120 CVIQPGVTRKALNEHLRDQGLFFPIDPGADASLGGMTSTRASGTNAVRYGTMRENVLALK 179 CVIQPG+TRK LNE+LRDQGLFFPIDPGADASLGGM STRASGTNAVRYGT+RENVLALK Sbjct: 121 CVIQPGITRKTLNEYLRDQGLFFPIDPGADASLGGMASTRASGTNAVRYGTIRENVLALK 180 Query: 180 VVRGDGEIITTGTRAKKSSAGYDLTHLFVGAEGTLGIISELTIRLRGIPDTIAAAACSFD 239 VVR DGEII TGTRAKKS+AGYDLTHLF+GAEGTLGII E+TIRLRGIP+TIAAAACSF+ Sbjct: 181 VVRADGEIIKTGTRAKKSAAGYDLTHLFIGAEGTLGIICEMTIRLRGIPETIAAAACSFE 240 Query: 240 TVRGACQATILAIQTGIPVARIELLNAAQVKACNSYSKLSLPETPLLLLEFHGSEVEVAE 299 TVRGACQATILAIQTGIPVARIELLNAAQVKACN+YSKL+LPETPLLLLEFHGSE EVAE Sbjct: 241 TVRGACQATILAIQTGIPVARIELLNAAQVKACNAYSKLTLPETPLLLLEFHGSEAEVAE 300 Query: 300 QSKNFRDIAAECGGGDFTWTTKPEDRTKLWQARHDAYWSVKALRPGDSIGVVATDVCVPI 359 QSKNF +IAAECGGG+F+WTTKPEDRTKLWQARHDAYWSVKA+RPG GVVATDVCVPI Sbjct: 301 QSKNFAEIAAECGGGEFSWTTKPEDRTKLWQARHDAYWSVKAIRPG--AGVVATDVCVPI 358 Query: 360 SRLADCVTETEDDLKRLNLLSPIVGHVGDGNFHCSLLCDVNDKDEMARGEEFMHRLVERA 419 SRLADCV ETE+DL RLNL SPIVGHVGDGNFHCSL+CDV+D EMARGEEFMHRLVERA Sbjct: 359 SRLADCVGETEEDLARLNLTSPIVGHVGDGNFHCSLMCDVDDAGEMARGEEFMHRLVERA 418 Query: 420 QAMDGTCTGEHGIGQGKQKYLQAELGPEALDAMRALKHALDPQNIFNPGKIVPA 473 QAM GTCTGEHGIGQGKQKYL++ELG EALDAMRA+K ALDPQNIFNPGKI+PA Sbjct: 419 QAMGGTCTGEHGIGQGKQKYLKSELGEEALDAMRAVKKALDPQNIFNPGKIIPA 472 >ref|YP_001207498.1| putative D-lactate dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL79281.1| putative D-lactate dehydrogenase (D-lactate ferricytochrome C oxidoreductase) [Bradyrhizobium sp. ORS 278] Length = 473 Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/474 (86%), Positives = 443/474 (93%), Gaps = 3/474 (0%) Query: 1 VATTI-SSTVTRPEPQALKRAIDALAARFGNRLVTSQAVREQHAHTTTWLPTQPPDAVVM 59 +ATTI + RP P+ALK A+DALAARFGNRL+TSQAVREQH HTTTWLPTQPPD VV+ Sbjct: 1 MATTIPHHDLKRPAPEALKSALDALAARFGNRLITSQAVREQHGHTTTWLPTQPPDGVVL 60 Query: 60 AQETADIQDVVRICAANRVPVIAFGTGTSLEGQVNAPAGGICIDLRDMNKVLEVHAEDLD 119 AQETADIQDVVRICA VP+I FGTGTSLEGQVNAPAGGICID+RDMNKVLEVHAEDLD Sbjct: 61 AQETADIQDVVRICAPLGVPIIPFGTGTSLEGQVNAPAGGICIDMRDMNKVLEVHAEDLD 120 Query: 120 CVIQPGVTRKALNEHLRDQGLFFPIDPGADASLGGMTSTRASGTNAVRYGTMRENVLALK 179 CVIQPG+TRK LNE+LRDQGLFFPIDPGADASLGGM STRASGTNAVRYGT+RENVLALK Sbjct: 121 CVIQPGITRKTLNEYLRDQGLFFPIDPGADASLGGMASTRASGTNAVRYGTIRENVLALK 180 Query: 180 VVRGDGEIITTGTRAKKSSAGYDLTHLFVGAEGTLGIISELTIRLRGIPDTIAAAACSFD 239 VVRGDGEII TGTRAKKS+AGYDLTHLF+GAEGTLGII E+TIRLRGIP+TIAAA+CSF+ Sbjct: 181 VVRGDGEIIKTGTRAKKSAAGYDLTHLFIGAEGTLGIICEMTIRLRGIPETIAAASCSFE 240 Query: 240 TVRGACQATILAIQTGIPVARIELLNAAQVKACNSYSKLSLPETPLLLLEFHGSEVEVAE 299 TVRGACQATILAIQTGIP+ARIELLNAAQV+ACN+YSKL+LPETPLLLLEFHGSE EVAE Sbjct: 241 TVRGACQATILAIQTGIPMARIELLNAAQVRACNAYSKLTLPETPLLLLEFHGSETEVAE 300 Query: 300 QSKNFRDIAAECGGGDFTWTTKPEDRTKLWQARHDAYWSVKALRPGDSIGVVATDVCVPI 359 QS+NF +IA ECGGGDF WTTKPEDRT+LWQARHDAYWSVKA+RPG +GVVATDVCVPI Sbjct: 301 QSRNFAEIARECGGGDFAWTTKPEDRTRLWQARHDAYWSVKAIRPG--VGVVATDVCVPI 358 Query: 360 SRLADCVTETEDDLKRLNLLSPIVGHVGDGNFHCSLLCDVNDKDEMARGEEFMHRLVERA 419 SRLADCV ETE+DL RL L SPIVGHVGDGNFHCSL+CDV+D DEMARGE+FMHRLVERA Sbjct: 359 SRLADCVGETEEDLARLKLTSPIVGHVGDGNFHCSLMCDVDDADEMARGEDFMHRLVERA 418 Query: 420 QAMDGTCTGEHGIGQGKQKYLQAELGPEALDAMRALKHALDPQNIFNPGKIVPA 473 QAM GTCTGEHGIGQGKQKYL++ELG EALDAMRA+K ALDPQNIFNPGKI+PA Sbjct: 419 QAMGGTCTGEHGIGQGKQKYLKSELGQEALDAMRAVKQALDPQNIFNPGKIIPA 472 >ref|YP_570489.1| FAD linked oxidase-like protein [Rhodopseudomonas palustris BisB5] gb|ABE40588.1| FAD linked oxidase-like [Rhodopseudomonas palustris BisB5] Length = 475 Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/471 (85%), Positives = 437/471 (92%) Query: 4 TISSTVTRPEPQALKRAIDALAARFGNRLVTSQAVREQHAHTTTWLPTQPPDAVVMAQET 63 TI++ R EPQA+ AI+ALAARFGNRLVTS AVREQH HTTTWLP QPPDAVVMAQET Sbjct: 4 TITNVPKRAEPQAVASAIEALAARFGNRLVTSLAVREQHGHTTTWLPNQPPDAVVMAQET 63 Query: 64 ADIQDVVRICAANRVPVIAFGTGTSLEGQVNAPAGGICIDLRDMNKVLEVHAEDLDCVIQ 123 ADIQDVVRICA + VPVIAFGTGTSLEG VNAPAGGICIDLRDMNK+L VHAEDLDCVIQ Sbjct: 64 ADIQDVVRICARHSVPVIAFGTGTSLEGHVNAPAGGICIDLRDMNKILAVHAEDLDCVIQ 123 Query: 124 PGVTRKALNEHLRDQGLFFPIDPGADASLGGMTSTRASGTNAVRYGTMRENVLALKVVRG 183 PGVTRKALNE+LRDQGLFFPIDPGADAS+GGM +TRASGTNAVRYGTMR+N+LA+KVVRG Sbjct: 124 PGVTRKALNENLRDQGLFFPIDPGADASIGGMAATRASGTNAVRYGTMRDNILAMKVVRG 183 Query: 184 DGEIITTGTRAKKSSAGYDLTHLFVGAEGTLGIISELTIRLRGIPDTIAAAACSFDTVRG 243 DGEIITTGTRAKKS+AGYDLTHLFVG+EGTLGIISELTI+LRGIP+ IAAA+CSF +V+ Sbjct: 184 DGEIITTGTRAKKSAAGYDLTHLFVGSEGTLGIISELTIKLRGIPEVIAAASCSFPSVKD 243 Query: 244 ACQATILAIQTGIPVARIELLNAAQVKACNSYSKLSLPETPLLLLEFHGSEVEVAEQSKN 303 ACQA ILAIQTGIPVARIELL+ AQV+ACN+YSKL+LPE PLLLLEFHGSEVEV EQS+N Sbjct: 244 ACQAVILAIQTGIPVARIELLSEAQVRACNAYSKLTLPEAPLLLLEFHGSEVEVGEQSRN 303 Query: 304 FRDIAAECGGGDFTWTTKPEDRTKLWQARHDAYWSVKALRPGDSIGVVATDVCVPISRLA 363 F +IA +CGGG+FTWTT+PEDR KLWQARHDAYWSV+ALR GD +GVVATDVCVPISRLA Sbjct: 304 FGEIAKDCGGGEFTWTTRPEDRNKLWQARHDAYWSVRALRSGDGVGVVATDVCVPISRLA 363 Query: 364 DCVTETEDDLKRLNLLSPIVGHVGDGNFHCSLLCDVNDKDEMARGEEFMHRLVERAQAMD 423 DCV ETE DL RLNLL+PIVGHVGDGNFHCSLLCDVND DEMARG+EFMHRLVERAQAMD Sbjct: 364 DCVAETEADLARLNLLAPIVGHVGDGNFHCSLLCDVNDADEMARGDEFMHRLVERAQAMD 423 Query: 424 GTCTGEHGIGQGKQKYLQAELGPEALDAMRALKHALDPQNIFNPGKIVPAA 474 GTCTGEHGIGQGKQKYL+AELG EAL AMRA+K ALDPQNIFNPGKI+P A Sbjct: 424 GTCTGEHGIGQGKQKYLKAELGIEALQAMRAIKQALDPQNIFNPGKILPQA 474 >ref|YP_485645.1| D-lactate dehydrogenase (cytochrome) [Rhodopseudomonas palustris HaA2] gb|ABD06734.1| D-lactate dehydrogenase (cytochrome) [Rhodopseudomonas palustris HaA2] Length = 475 Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/469 (85%), Positives = 432/469 (92%) Query: 4 TISSTVTRPEPQALKRAIDALAARFGNRLVTSQAVREQHAHTTTWLPTQPPDAVVMAQET 63 TI++T R EPQA+ AI+ALAARFGNRLVTS AVREQH HTTTWLP QPPDAVVMAQET Sbjct: 4 TITNTPKRAEPQAVASAIEALAARFGNRLVTSLAVREQHGHTTTWLPNQPPDAVVMAQET 63 Query: 64 ADIQDVVRICAANRVPVIAFGTGTSLEGQVNAPAGGICIDLRDMNKVLEVHAEDLDCVIQ 123 ADIQDVVRICA RVPVIAFGTGTSLEG VNAPAGGI IDLRDMNK+L VHAEDLDCVIQ Sbjct: 64 ADIQDVVRICAKYRVPVIAFGTGTSLEGHVNAPAGGISIDLRDMNKILSVHAEDLDCVIQ 123 Query: 124 PGVTRKALNEHLRDQGLFFPIDPGADASLGGMTSTRASGTNAVRYGTMRENVLALKVVRG 183 PGVTRKALNE LRDQGLFFPIDPGADAS+GGM +TRASGTNAVRYGTMR+NVLALKVVRG Sbjct: 124 PGVTRKALNEDLRDQGLFFPIDPGADASIGGMAATRASGTNAVRYGTMRDNVLALKVVRG 183 Query: 184 DGEIITTGTRAKKSSAGYDLTHLFVGAEGTLGIISELTIRLRGIPDTIAAAACSFDTVRG 243 DGEIITTGTRAKKS+AGYDLTHLFVG+EGTLGIISELTI+LRGIP+ IAAA+CSF +V Sbjct: 184 DGEIITTGTRAKKSAAGYDLTHLFVGSEGTLGIISELTIKLRGIPEVIAAASCSFSSVTD 243 Query: 244 ACQATILAIQTGIPVARIELLNAAQVKACNSYSKLSLPETPLLLLEFHGSEVEVAEQSKN 303 ACQA ILAIQTGIP+ARIELL+ +QV+A N+YSKL+LPETPLLLLEFHGSEVEV EQSKN Sbjct: 244 ACQAVILAIQTGIPLARIELLSESQVRAVNAYSKLTLPETPLLLLEFHGSEVEVGEQSKN 303 Query: 304 FRDIAAECGGGDFTWTTKPEDRTKLWQARHDAYWSVKALRPGDSIGVVATDVCVPISRLA 363 F IA +CGGGDFTWTT+PEDR KLWQARHDAYWSV+ALRPGD +GVVATDVCVPISRLA Sbjct: 304 FGAIAKDCGGGDFTWTTRPEDRNKLWQARHDAYWSVRALRPGDGVGVVATDVCVPISRLA 363 Query: 364 DCVTETEDDLKRLNLLSPIVGHVGDGNFHCSLLCDVNDKDEMARGEEFMHRLVERAQAMD 423 DCV ETE D+ RL LL+PIVGHVGDGNFHCSLLCDVND DEMAR +EFMHRLVERAQAMD Sbjct: 364 DCVAETEQDMARLGLLAPIVGHVGDGNFHCSLLCDVNDADEMARADEFMHRLVERAQAMD 423 Query: 424 GTCTGEHGIGQGKQKYLQAELGPEALDAMRALKHALDPQNIFNPGKIVP 472 GTCTGEHGIGQGKQKYLQAELG EAL AMRA+K ALDPQNIFNPGKI+P Sbjct: 424 GTCTGEHGIGQGKQKYLQAELGIEALQAMRAIKQALDPQNIFNPGKILP 472