BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0098.0002.p (274 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06690276.1| conserved hypothetical protein [Acinetobacter... 172 4e-41 gb|ADY81906.1| pyruvate dehydrogenase complex repressor [Acineto... 171 1e-40 ref|YP_001713614.1| GntR family transcriptional regulator [Acine... 171 1e-40 ref|ZP_05827106.1| transcriptional regulator GntR family [Acinet... 169 3e-40 ref|YP_004144366.1| GntR family transcriptional regulator [Mesor... 168 8e-40 >ref|ZP_06690276.1| conserved hypothetical protein [Acinetobacter sp. SH024] gb|EFF86908.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 238 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 97/228 (42%), Positives = 133/228 (58%), Gaps = 9/228 (3%) Query: 36 RSVHSQVTDRVGSSIVRGEIGVGETLPPEIRICEMMDVSRTVVREAIRTLTGKGLIESRP 95 +S H+ + ++G IV GEI E LP E+ +CE VSR V REAIR L KGL SRP Sbjct: 13 KSQHALIVQQLGLKIVSGEISENEKLPSEVDLCEEYKVSRPVFREAIRVLNAKGLTYSRP 72 Query: 96 KSGTRVRPPEQWNQLDPDVLRWHLESAEIDRYLAKLFQLRAAVEPAAAALAATHAEEVDV 155 K GT VRP E+W+ LDPDVL W +++ + L +R +EP A +AA+ A E D+ Sbjct: 73 KIGTVVRPKEEWHLLDPDVLFWLIQTTPEHEFFKTLSTVRRVLEPELAYIAASTANEEDI 132 Query: 156 ARIRAGCDGMDAAKTNEEFVAADIAFHQAIYFATRNEFFWPIAQMFEITLRQSFTIAAPG 215 RI+ DGM+ A T EEF+ DI FH AI AT N+ +++M + L+QS + Sbjct: 133 ERIKHAYDGMEKATTVEEFIEPDIQFHLAIAKATHNDLLAYMSKMLVLPLQQSIQVT--- 189 Query: 216 SHRP----RALREHRAVLDAIAAGDAETARAATVVLL--TNSADDLVR 257 S RP +L H+A+L AI D +AR A++V L T A DL++ Sbjct: 190 SLRPNLQGHSLPRHKAILTAIENKDPLSARHASLVQLDDTKMAYDLIK 237 >gb|ADY81906.1| pyruvate dehydrogenase complex repressor [Acinetobacter calcoaceticus PHEA-2] Length = 238 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 96/228 (42%), Positives = 133/228 (58%), Gaps = 9/228 (3%) Query: 36 RSVHSQVTDRVGSSIVRGEIGVGETLPPEIRICEMMDVSRTVVREAIRTLTGKGLIESRP 95 +S H+ + ++G IV GEI E LP E+ +CE VSR V REAIR L KGL SRP Sbjct: 13 KSQHALIVQQLGLKIVSGEISENEKLPSEVDLCEEYKVSRPVFREAIRVLNAKGLTYSRP 72 Query: 96 KSGTRVRPPEQWNQLDPDVLRWHLESAEIDRYLAKLFQLRAAVEPAAAALAATHAEEVDV 155 K GT VRP ++W+ LDPDVL W +++ + L +R +EP A +AA+ A E D+ Sbjct: 73 KIGTVVRPKDEWHLLDPDVLFWLIQTTPEHEFFKTLSTVRRVLEPELAYIAASTANEEDI 132 Query: 156 ARIRAGCDGMDAAKTNEEFVAADIAFHQAIYFATRNEFFWPIAQMFEITLRQSFTIAAPG 215 RI+ DGM+ A T EEF+ DI FH AI AT N+ +++M + L+QS + Sbjct: 133 ERIKHAYDGMEKATTVEEFIEPDIQFHLAIAKATHNDLLAYMSKMLVLPLQQSIQVT--- 189 Query: 216 SHRP----RALREHRAVLDAIAAGDAETARAATVVLL--TNSADDLVR 257 S RP +L H+A+L AI D +AR A++V L T A DL++ Sbjct: 190 SLRPNLQGHSLPRHKAILTAIENKDPLSARHASLVQLDDTKMAYDLIK 237 >ref|YP_001713614.1| GntR family transcriptional regulator [Acinetobacter baumannii AYE] ref|YP_001846612.1| transcriptional regulator [Acinetobacter baumannii ACICU] ref|YP_002319532.1| transcriptional regulator, GntR family [Acinetobacter baumannii AB0057] ref|ZP_04663637.1| transcriptional regulator, GntR family protein [Acinetobacter baumannii AB900] ref|ZP_05826409.1| transcriptional regulator GntR family protein [Acinetobacter sp. RUH2624] ref|ZP_07225354.1| transcriptional regulator, GntR family protein [Acinetobacter baumannii AB056] ref|ZP_07238156.1| transcriptional regulator, GntR family protein [Acinetobacter baumannii AB058] ref|ZP_07240501.1| transcriptional regulator, GntR family protein [Acinetobacter baumannii AB059] ref|ZP_08434619.1| FCD domain protein [Acinetobacter baumannii 6013150] ref|ZP_08438784.1| FCD domain protein [Acinetobacter baumannii 6013113] ref|ZP_08443559.1| FCD domain protein [Acinetobacter baumannii 6014059] emb|CAM86614.1| putative Transcriptional regulator (GntR family) [Acinetobacter baumannii AYE] gb|ACC57265.1| Transcriptional regulator [Acinetobacter baumannii ACICU] gb|ABO12267.2| transcriptional regulator GntR family [Acinetobacter baumannii ATCC 17978] gb|ACJ41549.1| transcriptional regulator, GntR family [Acinetobacter baumannii AB0057] gb|EEW98240.1| transcriptional regulator GntR family protein [Acinetobacter sp. RUH2624] gb|ADX04054.1| Transcriptional regulator GntR family [Acinetobacter baumannii 1656-2] gb|ADX92590.1| transcriptional regulator [Acinetobacter baumannii TCDC-AB0715] gb|EGJ60129.1| FCD domain protein [Acinetobacter baumannii 6013150] gb|EGJ63966.1| FCD domain protein [Acinetobacter baumannii 6013113] gb|EGJ67052.1| FCD domain protein [Acinetobacter baumannii 6014059] gb|EGK47032.1| transcriptional regulator [Acinetobacter baumannii AB210] gb|EGT89905.1| transcriptional regulator, GntR family protein [Acinetobacter baumannii ABNIH1] gb|EGT95615.1| transcriptional regulator, GntR family protein [Acinetobacter baumannii ABNIH2] gb|EGT98399.1| transcriptional regulator, GntR family protein [Acinetobacter baumannii ABNIH3] gb|EGT99577.1| transcriptional regulator, GntR family protein [Acinetobacter baumannii ABNIH4] gb|AEP06594.1| GntR family transcriptional regulator [Acinetobacter baumannii MDR-ZJ06] Length = 238 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 96/228 (42%), Positives = 133/228 (58%), Gaps = 9/228 (3%) Query: 36 RSVHSQVTDRVGSSIVRGEIGVGETLPPEIRICEMMDVSRTVVREAIRTLTGKGLIESRP 95 +S H+ + ++G IV GEI E LP E+ +CE VSR V REAIR L KGL SRP Sbjct: 13 KSQHALIVQQLGLKIVSGEISENEKLPSEVDLCEEYKVSRPVFREAIRVLNAKGLTYSRP 72 Query: 96 KSGTRVRPPEQWNQLDPDVLRWHLESAEIDRYLAKLFQLRAAVEPAAAALAATHAEEVDV 155 K GT VRP E+W+ LDPDVL W +++ + L +R +EP A +AA+ A E D+ Sbjct: 73 KIGTVVRPKEEWHLLDPDVLFWLIQTTPEHEFFKTLSTVRRVLEPELAYIAASTANEEDI 132 Query: 156 ARIRAGCDGMDAAKTNEEFVAADIAFHQAIYFATRNEFFWPIAQMFEITLRQSFTIAAPG 215 RI+ +GM+ A T EEF+ DI FH AI AT N+ +++M + L+QS + Sbjct: 133 ERIKQAYEGMEKATTVEEFIEPDIQFHLAIAKATHNDLLAYMSKMLVLPLQQSIQVT--- 189 Query: 216 SHRP----RALREHRAVLDAIAAGDAETARAATVVLL--TNSADDLVR 257 S RP +L H+A+L AI D +AR A++V L T A DL++ Sbjct: 190 SLRPNLQGHSLPRHKAILTAIENKDPLSARHASLVQLDDTKMAYDLIK 237 >ref|ZP_05827106.1| transcriptional regulator GntR family [Acinetobacter baumannii ATCC 19606] gb|EEX04724.1| transcriptional regulator GntR family [Acinetobacter baumannii ATCC 19606] Length = 238 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 95/228 (41%), Positives = 133/228 (58%), Gaps = 9/228 (3%) Query: 36 RSVHSQVTDRVGSSIVRGEIGVGETLPPEIRICEMMDVSRTVVREAIRTLTGKGLIESRP 95 +S H+ + ++G IV GEI E LP E+ +CE VSR V REAIR L KGL SRP Sbjct: 13 KSQHALIVQQLGLKIVSGEISENEKLPSEVDLCEEYKVSRPVFREAIRVLNAKGLTYSRP 72 Query: 96 KSGTRVRPPEQWNQLDPDVLRWHLESAEIDRYLAKLFQLRAAVEPAAAALAATHAEEVDV 155 K GT VRP ++W+ LDPDVL W +++ + L +R +EP A +AA+ A E D+ Sbjct: 73 KIGTVVRPKDEWHLLDPDVLFWLIQTTPEHEFFKTLSTVRRVLEPELAYIAASTANEEDI 132 Query: 156 ARIRAGCDGMDAAKTNEEFVAADIAFHQAIYFATRNEFFWPIAQMFEITLRQSFTIAAPG 215 RI+ +GM+ A T EEF+ DI FH AI AT N+ +++M + L+QS + Sbjct: 133 ERIKQAYEGMEKATTVEEFIEPDIQFHLAIAKATHNDLLAYMSKMLVLPLQQSIQVT--- 189 Query: 216 SHRP----RALREHRAVLDAIAAGDAETARAATVVLL--TNSADDLVR 257 S RP +L H+A+L AI D +AR A++V L T A DL++ Sbjct: 190 SLRPNLQGHSLPRHKAILTAIENKDPLSARHASLVQLDDTKMAYDLIK 237 >ref|YP_004144366.1| GntR family transcriptional regulator [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV14316.1| GntR domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 247 Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 132/224 (58%), Gaps = 4/224 (1%) Query: 37 SVHSQVTDRVGSSIVRGEIGVGETLPPEIRICEMMDVSRTVVREAIRTLTGKGLIESRPK 96 ++H+ V +++G IV+G+ GE LP EM+ VSRTV+REAI+ L GKGL+ESRPK Sbjct: 9 ALHATVVEQIGLRIVQGDFLPGEALPNADDSSEMLGVSRTVLREAIKVLAGKGLVESRPK 68 Query: 97 SGTRVRPPEQWNQLDPDVLRWHLESAEIDRYLAKLFQLRAAVEPAAAALAATHAEEVDVA 156 +GTRVRP WN LDPDVL W S + LF+LR A+EP +AALAA A +A Sbjct: 69 TGTRVRPRADWNFLDPDVLSWRYASGVSADDVRALFELRRAIEPMSAALAAQRATPAQIA 128 Query: 157 RIRAGCDGMDA-AKTNEEFVAADIAFHQAIYFATRNEFFWPIAQMFEITLRQSFTIA--A 213 I A M+A + F D+ FHQ I T NE +A + E L SF ++ Sbjct: 129 EINAALVEMEAVVDDGDRFAKPDLLFHQTILRMTGNELIGSLAALVETALVTSFRLSNDN 188 Query: 214 PGSHRPRALREHRAVLDAIAAGDAETARAATVVLLTNSADDLVR 257 P RP +L HR V + IAAGDA A+ A +VL+ N+ +D+ R Sbjct: 189 PEGQRP-SLPLHREVAEKIAAGDATGAQKALLVLIDNAEEDVRR 231