BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0097.0022.p (312 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004716711.1| ABC transporter solute-binding protein [Sino... 539 e-151 ref|YP_002825198.1| putative solute-binding component of ABC tra... 508 e-142 ref|YP_002975230.1| rhizopine-binding protein precursor [Rhizobi... 293 3e-77 ref|YP_767351.1| solute-binding component of ABC transporter [Rh... 292 6e-77 ref|ZP_08872818.1| periplasmic-binding protein/LacI transcriptio... 276 5e-72 >ref|YP_004716711.1| ABC transporter solute-binding protein [Sinorhizobium fredii GR64] gb|AEI89574.1| solute-binding component of ABC transporter protein [Sinorhizobium fredii GR64] Length = 330 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 259/305 (84%), Positives = 280/305 (91%) Query: 8 AFAQSKIRIAALSFGESGEYMKAWSSEIQNHPAVKDGSVAVTIFDGKYDPLVQANQIDTA 67 AFAQ KIRIAALSFGESGEYMKAWS+EIQNHPAVK G V +T+FDGKYDPL QANQIDTA Sbjct: 26 AFAQDKIRIAALSFGESGEYMKAWSTEIQNHPAVKSGEVEITVFDGKYDPLTQANQIDTA 85 Query: 68 ITQKFNAIIMAPFDLQASAPAIDKAIAAGIPVIVSALKTASKGYTASIIVNDTEGGRIIG 127 ITQ+FNAIIM+PFDL+ASAP I+KA A IP+IVSALKT S YTASIIVNDTEGGRII Sbjct: 86 ITQQFNAIIMSPFDLEASAPPIEKAAEAKIPLIVSALKTKSTKYTASIIVNDTEGGRIIA 145 Query: 128 EELGKLLPNGGNVVLMEGPIGQSAQIERKAGVDAGLAKFPKLKLLASKSGNWSRAEGQAL 187 EEL K LPNGGNVVLMEGPIGQSAQIER+AG+DAGLAKFP LKL+ K+GNWSRAEGQAL Sbjct: 146 EELAKRLPNGGNVVLMEGPIGQSAQIERRAGIDAGLAKFPNLKLIEDKTGNWSRAEGQAL 205 Query: 188 MENWLLAHPGKINAVLAENDEMALGAIEAMRSAKVDFKSVPVLAIDGIPDGKRAVRKGEM 247 MENWLLAHPG+IN VLAENDEMALGAIEAM+SA +D K+VPVLAIDGIPD KRAV+KGEM Sbjct: 206 MENWLLAHPGEINGVLAENDEMALGAIEAMKSAGIDLKTVPVLAIDGIPDAKRAVKKGEM 265 Query: 248 TVTLYKYARAEGQGAVDLALRAIKGDSYKPQSEIWNSLMEWKGGTEKDYVVPWLLLDSSN 307 V+LYKYARAEGQGAVDLALRAIKG+SYKPQSEIW SLMEWKGGTEKDYVVPWL+LDS+N Sbjct: 266 AVSLYKYARAEGQGAVDLALRAIKGESYKPQSEIWGSLMEWKGGTEKDYVVPWLVLDSTN 325 Query: 308 VAKYM 312 V KYM Sbjct: 326 VEKYM 330 >ref|YP_002825198.1| putative solute-binding component of ABC transporter [Sinorhizobium fredii NGR234] gb|ACP24445.1| putative solute-binding component of ABC transporter [Sinorhizobium fredii NGR234] Length = 327 Score = 508 bits (1307), Expect = e-142, Method: Compositional matrix adjust. Identities = 244/312 (78%), Positives = 270/312 (86%) Query: 1 MILSTGTAFAQSKIRIAALSFGESGEYMKAWSSEIQNHPAVKDGSVAVTIFDGKYDPLVQ 60 M+L A AQ KIRIAALSFGE+GEYMKAWS+EIQNHPAVK+G V +T+FDGKYDPL+Q Sbjct: 16 MLLGADLAAAQEKIRIAALSFGEAGEYMKAWSTEIQNHPAVKEGKVEITVFDGKYDPLIQ 75 Query: 61 ANQIDTAITQKFNAIIMAPFDLQASAPAIDKAIAAGIPVIVSALKTASKGYTASIIVNDT 120 ANQIDTA+TQ+FNAIIMAPFDL+ASAPAIDKA A +PVIVSALKT+SK YTASIIV+D Sbjct: 76 ANQIDTALTQQFNAIIMAPFDLEASAPAIDKAAEAKVPVIVSALKTSSKNYTASIIVDDR 135 Query: 121 EGGRIIGEELGKLLPNGGNVVLMEGPIGQSAQIERKAGVDAGLAKFPKLKLLASKSGNWS 180 EGGRII EE+ K LP+GGN+VLMEGPIGQSAQIER+AGVDAGL LKLLA KSGNWS Sbjct: 136 EGGRIIAEEMAKRLPSGGNLVLMEGPIGQSAQIERRAGVDAGLEAHSNLKLLADKSGNWS 195 Query: 181 RAEGQALMENWLLAHPGKINAVLAENDEMALGAIEAMRSAKVDFKSVPVLAIDGIPDGKR 240 RAEGQALMENWL A+P +IN VLAENDEMALGAIEAM++A VD VPV+AIDGIPD KR Sbjct: 196 RAEGQALMENWLSAYPDQINGVLAENDEMALGAIEAMKAANVDLSKVPVIAIDGIPDAKR 255 Query: 241 AVRKGEMTVTLYKYARAEGQGAVDLALRAIKGDSYKPQSEIWNSLMEWKGGTEKDYVVPW 300 AV GEM VTLYKYARAEGQGAVDLALR + G YKPQSE+WN LMEWK GT+KDYVVPW Sbjct: 256 AVENGEMAVTLYKYARAEGQGAVDLALRQVIGTEYKPQSEVWNGLMEWKDGTQKDYVVPW 315 Query: 301 LLLDSSNVAKYM 312 L+LD NV KYM Sbjct: 316 LILDKDNVKKYM 327 >ref|YP_002975230.1| rhizopine-binding protein precursor [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS55691.1| rhizopine-binding protein precursor [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 328 Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 150/305 (49%), Positives = 204/305 (66%), Gaps = 3/305 (0%) Query: 10 AQSKIRIAALSFGESGEYMKAWSSEIQNHPAVKDGSVAVTIFDGKYDPLVQANQIDTAIT 69 AQ KI+I A +G + E+M+ W++ +Q HPAVK G V +T+FDG+YD LVQ +Q T +T Sbjct: 21 AQEKIKIGAAPYGLNAEFMQIWAAAMQEHPAVKSGEVELTVFDGRYDALVQQDQFKTMVT 80 Query: 70 QKFNAIIMAPFDLQASAPAIDKAIAAGIPVIVSALKTASKGYTASIIVNDTEGGRIIGEE 129 QK+NAII AP D+ A A A+ A+ AGIPVI S + S T+ + +DT G + + Sbjct: 81 QKYNAIIFAPIDVDAGAAAVQSAVDAGIPVIGSNTRVNSDLLTSYVGSDDTISGYMEAKT 140 Query: 130 LGKLLPNGGNVVLMEGPIGQSAQIERKAGVDAGLAKFPKLKLLASKSGNWSRAEGQALME 189 + L GNVV++EGP+GQSAQI R G LA+ P +K+L ++ NWSRAE Q LME Sbjct: 141 VLDKLGCKGNVVILEGPVGQSAQISRLEGNKKALAECPDVKVLEDQTANWSRAEAQTLME 200 Query: 190 NWLLAHPGKINAVLAENDEMALGAIEAMRSAKVDFKSVPVLAIDGIPDGKRAVRKGEMTV 249 NWL AHP +IN V+ +NDEMALGAIEA+++A +D KS + IDGI D RAV+ GEMT Sbjct: 201 NWLTAHPKQINGVIGQNDEMALGAIEAIKAAGLDEKSFAIAGIDGITDALRAVKAGEMT- 259 Query: 250 TLYKYARAEGQGAVDLALRAIKGDSYKPQSEIWNSL--MEWKGGTEKDYVVPWLLLDSSN 307 ++ + ARA+ QGA+DLA+ K YKPQS+IW + M W G +K+Y VPW + + N Sbjct: 260 SILQDARAQAQGALDLAIFHAKKGDYKPQSDIWATYKDMPWNDGKDKNYNVPWTPVTADN 319 Query: 308 VAKYM 312 V K + Sbjct: 320 VDKLL 324 >ref|YP_767351.1| solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] emb|CAK07242.1| putative solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 328 Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 149/305 (48%), Positives = 204/305 (66%), Gaps = 3/305 (0%) Query: 10 AQSKIRIAALSFGESGEYMKAWSSEIQNHPAVKDGSVAVTIFDGKYDPLVQANQIDTAIT 69 AQ KI+I A +G + E+M+ W++ +Q HPAVK G V +T+FDG+YD LVQ +Q T +T Sbjct: 21 AQEKIKIGAAPYGLNAEFMQIWAAAMQEHPAVKSGEVELTVFDGRYDALVQQDQFKTMVT 80 Query: 70 QKFNAIIMAPFDLQASAPAIDKAIAAGIPVIVSALKTASKGYTASIIVNDTEGGRIIGEE 129 QK+NAII AP D+ A A A+ A+ AGIPVI S + S T+ + +DT G + + Sbjct: 81 QKYNAIIFAPIDVDAGAAAVQSAVDAGIPVIGSNTRVNSDLLTSYVGSDDTISGYMEAKT 140 Query: 130 LGKLLPNGGNVVLMEGPIGQSAQIERKAGVDAGLAKFPKLKLLASKSGNWSRAEGQALME 189 + L GNVV++EGP+GQSAQI R G LA+ P +K+L ++ NWSRAE Q LME Sbjct: 141 VLDKLGCKGNVVILEGPVGQSAQISRLEGNKKALAECPDVKVLEDQTANWSRAEAQTLME 200 Query: 190 NWLLAHPGKINAVLAENDEMALGAIEAMRSAKVDFKSVPVLAIDGIPDGKRAVRKGEMTV 249 NWL AHP +IN V+ +NDEMALGAIEA+++A +D KS + IDGI D RAV+ GEMT Sbjct: 201 NWLTAHPKQINGVIGQNDEMALGAIEAIKAAGLDEKSFAIAGIDGITDALRAVKAGEMT- 259 Query: 250 TLYKYARAEGQGAVDLALRAIKGDSYKPQSEIWNSL--MEWKGGTEKDYVVPWLLLDSSN 307 ++ + ARA+ QGA+DLA+ + YKPQS+IW + M W G +K+Y VPW + + N Sbjct: 260 SILQDARAQAQGALDLAIFYARKGDYKPQSDIWATYKDMPWNDGKDKNYNVPWTPVTADN 319 Query: 308 VAKYM 312 V K + Sbjct: 320 VDKLL 324 >ref|ZP_08872818.1| periplasmic-binding protein/LacI transcriptional regulator [Verminephrobacter sp. At4] Length = 334 Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 138/297 (46%), Positives = 196/297 (65%), Gaps = 5/297 (1%) Query: 15 RIAALSFGESGEYMKAWSSEIQNHPAVKDGSVAVTIFDGKYDPLVQANQIDTAITQKFNA 74 +I A +G GE+M+ W + ++ HPAVKDGSV +TIFDGKYD L Q NQ +T +TQKF+ Sbjct: 29 KIGAAVYGLKGEFMQLWVNALKEHPAVKDGSVKLTIFDGKYDALTQNNQFETMVTQKFDG 88 Query: 75 IIMAPFDLQASAPAIDKAIAAGIPVIVSALKTASKGYTASIIVNDTEGGRIIGEELGKLL 134 I+ P D+QA A A++KA A IPV+ S + S + + +DT G + E + K + Sbjct: 89 ILFVPIDIQAGAQAVEKAAEAKIPVVGSNARVLSDKLVSYVGSDDTVAGALEAEAVIKAM 148 Query: 135 PNGGNVVLMEGPIGQSAQIERKAGVDAGLAKFPKLKLLASKSGNWSRAEGQALMENWLLA 194 GNVV++EGPIGQSAQIER+ G A LAK+ +K+L ++ NWSRAE +LMENWL A Sbjct: 149 GGKGNVVIIEGPIGQSAQIERRKGNQAALAKYKDVKVLEMRTANWSRAEALSLMENWLTA 208 Query: 195 HPGKINAVLAENDEMALGAIEAMRSAKVDFKSVPVLAIDGIPDGKRAVRKGEMTVTLYKY 254 H GKI+ V+ +NDEMALGAIEA+++ + KS+PV IDG+ D RAV++G M +++ + Sbjct: 209 HAGKIHGVIGQNDEMALGAIEALKAKGLSPKSIPVAGIDGVTDAIRAVKEGHM-MSILQD 267 Query: 255 ARAEGQGAVDLALRAIKGDSYKPQSEIWNSL----MEWKGGTEKDYVVPWLLLDSSN 307 A+ + QG +D+ LR I G Y+P++ +WN + W GT + Y VPW + N Sbjct: 268 AQGQAQGGLDVLLRHIVGPGYEPRAALWNDYASEGLSWGDGTARQYNVPWTPITLQN 324