BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0097.0016.p (240 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08628471.1| LrgA-associated membrane protein LrgB [Bradyr... 375 e-102 ref|YP_001237256.1| putative inner membrane protein yohK [Bradyr... 371 e-101 ref|NP_767988.1| hypothetical protein blr1348 [Bradyrhizobium ja... 369 e-100 ref|YP_530515.1| LrgB-like protein [Rhodopseudomonas palustris B... 351 6e-95 ref|YP_567472.1| LrgB-like protein [Rhodopseudomonas palustris B... 345 3e-93 >ref|ZP_08628471.1| LrgA-associated membrane protein LrgB [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08795.1| LrgA-associated membrane protein LrgB [Bradyrhizobiaceae bacterium SG-6C] Length = 240 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 185/240 (77%), Positives = 217/240 (90%) Query: 1 MNEHPFSLWVYLSQSPLLWLTVTLSVYAITDALSLATHRHPLANPVLHSIWIIGGFLIMT 60 M ++PFSLWVYLSQ+PLLWL+VTL+VYA DALSLATHR+PL NPVLHSIW+IG FL +T Sbjct: 1 MTDNPFSLWVYLSQTPLLWLSVTLAVYAAADALSLATHRNPLMNPVLHSIWVIGLFLYLT 60 Query: 61 GTSYTTYFSGAQFVHFLLGPATVALAIPLYDHRKRVIAAIVPMLISLVAGSITAIVSVVL 120 GTSYTTYF GAQFVHFLLGPATVALA+PLY++R RV AAI+PML +L+ GS TAIVSV+L Sbjct: 61 GTSYTTYFGGAQFVHFLLGPATVALAVPLYENRARVAAAILPMLAALLVGSATAIVSVML 120 Query: 121 FARAFGLPQAVILSLAPKSVTAGVAMGISESLRGDASLTAVSVVLTGIMGAIIVTPLMNR 180 FA A GLP+ ++L+LAPKSVTAGVAMGISE+L + ++T ++ VLTG+MGAI+VTP MNR Sbjct: 121 FAEAAGLPREIVLALAPKSVTAGVAMGISETLGANPAITVIATVLTGVMGAIVVTPTMNR 180 Query: 181 IAVTDFRARGFAVGIAAHGIGTARAFQVDEVAGVFSGIAMGLNALVTSLLVPLAVTLLLH 240 + +TDFRARGFAVG+A+HGIGTARAFQVDEVAGVF+GIAMGLNALVTSLLVPLAVTLLL Sbjct: 181 LGITDFRARGFAVGLASHGIGTARAFQVDEVAGVFAGIAMGLNALVTSLLVPLAVTLLLR 240 >ref|YP_001237256.1| putative inner membrane protein yohK [Bradyrhizobium sp. BTAi1] gb|ABQ33350.1| putative Inner membrane protein yohK [Bradyrhizobium sp. BTAi1] Length = 240 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 184/240 (76%), Positives = 212/240 (88%) Query: 1 MNEHPFSLWVYLSQSPLLWLTVTLSVYAITDALSLATHRHPLANPVLHSIWIIGGFLIMT 60 M+ +PFSLWVYL+QSPLLWLTVTL +YA+TDA+SL T RHPLANPVLH++WI+ FL++T Sbjct: 1 MSANPFSLWVYLAQSPLLWLTVTLVIYAVTDAVSLRTRRHPLANPVLHAMWIVAAFLLLT 60 Query: 61 GTSYTTYFSGAQFVHFLLGPATVALAIPLYDHRKRVIAAIVPMLISLVAGSITAIVSVVL 120 GT YTTYF+GAQFVHFLLGPATVALA+PLY +R V+ AIVPML +L+ GSITAIVSV+L Sbjct: 61 GTPYTTYFAGAQFVHFLLGPATVALAVPLYQNRGIVLQAIVPMLAALIVGSITAIVSVIL 120 Query: 121 FARAFGLPQAVILSLAPKSVTAGVAMGISESLRGDASLTAVSVVLTGIMGAIIVTPLMNR 180 A AFGLPQ V+LSLAPKSVTAGVAMGISESL D SLTAV+VVLTGI+GA+IVTPLMN Sbjct: 121 LAEAFGLPQDVVLSLAPKSVTAGVAMGISESLHADPSLTAVAVVLTGIIGAVIVTPLMNS 180 Query: 181 IAVTDFRARGFAVGIAAHGIGTARAFQVDEVAGVFSGIAMGLNALVTSLLVPLAVTLLLH 240 +TDFRARGFA G+AAHGIGTARAFQVD +AG FSGIAM LNALVTS LVP+A+TLL+ Sbjct: 181 TGITDFRARGFAAGLAAHGIGTARAFQVDALAGTFSGIAMSLNALVTSFLVPIAITLLVR 240 >ref|NP_767988.1| hypothetical protein blr1348 [Bradyrhizobium japonicum USDA 110] dbj|BAC46613.1| blr1348 [Bradyrhizobium japonicum USDA 110] Length = 240 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 193/240 (80%), Positives = 220/240 (91%) Query: 1 MNEHPFSLWVYLSQSPLLWLTVTLSVYAITDALSLATHRHPLANPVLHSIWIIGGFLIMT 60 M ++PFSLWVYLSQSPLLWLTVTL VYA TDA+SLA+ RHPLANPVLH++WIIG FL++T Sbjct: 1 MKDNPFSLWVYLSQSPLLWLTVTLLVYASTDAVSLASRRHPLANPVLHAMWIIGVFLLVT 60 Query: 61 GTSYTTYFSGAQFVHFLLGPATVALAIPLYDHRKRVIAAIVPMLISLVAGSITAIVSVVL 120 GTSYTTYF+GAQFVHFLLGPATVALA+PLY++RKRV+++IVPML++LVAGS+TA+VSVVL Sbjct: 61 GTSYTTYFAGAQFVHFLLGPATVALAVPLYENRKRVVSSIVPMLVALVAGSVTAVVSVVL 120 Query: 121 FARAFGLPQAVILSLAPKSVTAGVAMGISESLRGDASLTAVSVVLTGIMGAIIVTPLMNR 180 A GLP+ V+LSLAPKSVTAGVAMGI+ESL D SL AV+V+LTGIMGAIIVTPLMNR Sbjct: 121 LAELAGLPRDVVLSLAPKSVTAGVAMGIAESLHADPSLAAVAVILTGIMGAIIVTPLMNR 180 Query: 181 IAVTDFRARGFAVGIAAHGIGTARAFQVDEVAGVFSGIAMGLNALVTSLLVPLAVTLLLH 240 VTDFRARGFA G+AAHGIGTARAFQVDE+AGVFSGIAM LNALVTS LVPLAVTLL+ Sbjct: 181 TGVTDFRARGFAAGLAAHGIGTARAFQVDEIAGVFSGIAMSLNALVTSFLVPLAVTLLVR 240 >ref|YP_530515.1| LrgB-like protein [Rhodopseudomonas palustris BisB18] gb|ABD86196.1| LrgB-like protein [Rhodopseudomonas palustris BisB18] Length = 241 Score = 351 bits (900), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 175/240 (72%), Positives = 209/240 (87%) Query: 1 MNEHPFSLWVYLSQSPLLWLTVTLSVYAITDALSLATHRHPLANPVLHSIWIIGGFLIMT 60 M ++PF+LWVYLSQSPLLWLT TL VYA+TDA+S A+ R+PLANPVLH++W+IG FL +T Sbjct: 1 MIDNPFALWVYLSQSPLLWLTTTLVVYAMTDAVSQASRRNPLANPVLHAMWVIGIFLWLT 60 Query: 61 GTSYTTYFSGAQFVHFLLGPATVALAIPLYDHRKRVIAAIVPMLISLVAGSITAIVSVVL 120 GTSY TYF GAQFVHFLLGP TVALA+PLY++R V+AAIVPML++LV GS+TAI SVV Sbjct: 61 GTSYQTYFEGAQFVHFLLGPVTVALAVPLYENRNAVMAAIVPMLLALVVGSVTAIGSVVG 120 Query: 121 FARAFGLPQAVILSLAPKSVTAGVAMGISESLRGDASLTAVSVVLTGIMGAIIVTPLMNR 180 A+AFGLP V+LS+ PKSVTA VAMGI+ES+ D SL AV+V+LTGI+GAIIVTPLMN Sbjct: 121 LAKAFGLPDIVMLSMTPKSVTAPVAMGIAESIHADPSLAAVAVILTGIIGAIIVTPLMNL 180 Query: 181 IAVTDFRARGFAVGIAAHGIGTARAFQVDEVAGVFSGIAMGLNALVTSLLVPLAVTLLLH 240 + VTDFRARGFAVG+A+HGIGTA+AFQ++ VAG F+GIAM LNAL+TSLLVPLA TLL H Sbjct: 181 VKVTDFRARGFAVGLASHGIGTAQAFQINPVAGAFAGIAMSLNALLTSLLVPLAATLLFH 240 >ref|YP_567472.1| LrgB-like protein [Rhodopseudomonas palustris BisB5] gb|ABE37571.1| LrgB-like protein [Rhodopseudomonas palustris BisB5] Length = 240 Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 181/240 (75%), Positives = 213/240 (88%) Query: 1 MNEHPFSLWVYLSQSPLLWLTVTLSVYAITDALSLATHRHPLANPVLHSIWIIGGFLIMT 60 M+ PFSLWVYLSQ+PLLWLTVTL VYA TDA+S AT R PLANPVLH+IWIIG FL +T Sbjct: 1 MSATPFSLWVYLSQTPLLWLTVTLLVYAATDAVSQATERSPLANPVLHAIWIIGAFLWLT 60 Query: 61 GTSYTTYFSGAQFVHFLLGPATVALAIPLYDHRKRVIAAIVPMLISLVAGSITAIVSVVL 120 GTSYTTYFSGAQFVHFLLGPATVALA+PLY++R++VIAAIVPM ++LV G I AIVSV++ Sbjct: 61 GTSYTTYFSGAQFVHFLLGPATVALAVPLYENRRQVIAAIVPMALALVVGCIVAIVSVMV 120 Query: 121 FARAFGLPQAVILSLAPKSVTAGVAMGISESLRGDASLTAVSVVLTGIMGAIIVTPLMNR 180 A+ GLP+ V+LSLA KSVTAGVAMGISESL D SLTAV+VVLTG+MGAI+VTPLMN Sbjct: 121 LAQLAGLPETVVLSLASKSVTAGVAMGISESLNADPSLTAVAVVLTGVMGAIMVTPLMNA 180 Query: 181 IAVTDFRARGFAVGIAAHGIGTARAFQVDEVAGVFSGIAMGLNALVTSLLVPLAVTLLLH 240 + + DFRARGF+VG+A+HGIGTARAFQVD +AGVF+GIAM LNAL+T++LVP+AVTLL+ Sbjct: 181 LGIRDFRARGFSVGLASHGIGTARAFQVDAIAGVFAGIAMSLNALITAMLVPVAVTLLVK 240