BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0096.0025.p (234 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001240434.1| LexA repressor [Bradyrhizobium sp. BTAi1] >g... 414 e-114 ref|YP_001206097.1| LexA repressor [Bradyrhizobium sp. ORS 278] ... 414 e-114 ref|NP_771466.1| LexA repressor [Bradyrhizobium japonicum USDA 1... 410 e-113 ref|YP_004108921.1| LexA family transcriptional repressor [Rhodo... 410 e-112 ref|YP_486422.1| LexA repressor [Rhodopseudomonas palustris HaA2... 409 e-112 >ref|YP_001240434.1| LexA repressor [Bradyrhizobium sp. BTAi1] sp|A5EK34.1|LEXA_BRASB RecName: Full=LexA repressor gb|ABQ36528.1| SOS-response transcriptional repressor, LexA [Bradyrhizobium sp. BTAi1] Length = 232 Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust. Identities = 213/235 (90%), Positives = 220/235 (93%), Gaps = 4/235 (1%) Query: 1 MLTRKQYELLRFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR 60 MLTRKQYELLRFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR Sbjct: 1 MLTRKQYELLRFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR 60 Query: 61 ARAIEVIKLPELSAGGGNGRRGFTPSVIEGTLGR-RASTPPIAEDDGNRPVAVPVMGRIA 119 ARAIEVIKLPELS N RRGFTPSVIEG LG+ R STP A DDG RPVAVPVMGRIA Sbjct: 61 ARAIEVIKLPELSQAASN-RRGFTPSVIEGNLGKVRTSTP--ALDDGERPVAVPVMGRIA 117 Query: 120 AGTPIEALQTRSHTISVPPDMLGAGEHYALEVRGDSMVDAGILDGDMALIQRNDVANTGD 179 AGTPIEALQTRSHTISVP DMLG G+HYALEVRGDSMVDAGILDGDMALIQRN+ A+TGD Sbjct: 118 AGTPIEALQTRSHTISVPADMLGNGDHYALEVRGDSMVDAGILDGDMALIQRNETADTGD 177 Query: 180 IVVALIDEEEATLKRFRRRGASIALEPANTAYEVRILPPNRVRIQGKLIGLYRKY 234 IVVALID+EEATLKRFRRRGASIALEPANTAYEVRILPPNRV+IQGKL+GLYRKY Sbjct: 178 IVVALIDDEEATLKRFRRRGASIALEPANTAYEVRILPPNRVKIQGKLVGLYRKY 232 >ref|YP_001206097.1| LexA repressor [Bradyrhizobium sp. ORS 278] sp|A4YVE6.1|LEXA_BRASO RecName: Full=LexA repressor emb|CAL77872.1| SOS response transcriptional repressor, lexA [Bradyrhizobium sp. ORS 278] Length = 232 Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust. Identities = 213/235 (90%), Positives = 221/235 (94%), Gaps = 4/235 (1%) Query: 1 MLTRKQYELLRFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR 60 MLTRKQYELLRFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR Sbjct: 1 MLTRKQYELLRFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR 60 Query: 61 ARAIEVIKLPELSAGGGNGRRGFTPSVIEGTLGR-RASTPPIAEDDGNRPVAVPVMGRIA 119 ARAIEVIKLPELS GN RRGFTPSVIEG LG+ R STP A +DG RPVAVPVMGRIA Sbjct: 61 ARAIEVIKLPELSQAAGN-RRGFTPSVIEGNLGKVRTSTP--ALEDGERPVAVPVMGRIA 117 Query: 120 AGTPIEALQTRSHTISVPPDMLGAGEHYALEVRGDSMVDAGILDGDMALIQRNDVANTGD 179 AGTPIEALQTRSHTISVP DMLG G+HYALEVRGDSMVDAGILDGDMALIQRN+ A+TGD Sbjct: 118 AGTPIEALQTRSHTISVPADMLGNGDHYALEVRGDSMVDAGILDGDMALIQRNETADTGD 177 Query: 180 IVVALIDEEEATLKRFRRRGASIALEPANTAYEVRILPPNRVRIQGKLIGLYRKY 234 IVVALID+EEATLKRFRRRGASIALEPANTAYEVRILPPNRV+IQGKL+GLYRKY Sbjct: 178 IVVALIDDEEATLKRFRRRGASIALEPANTAYEVRILPPNRVKIQGKLVGLYRKY 232 >ref|NP_771466.1| LexA repressor [Bradyrhizobium japonicum USDA 110] sp|Q89KS7.1|LEXA_BRAJA RecName: Full=LexA repressor dbj|BAC50091.1| LexA repressor [Bradyrhizobium japonicum USDA 110] Length = 231 Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust. Identities = 210/235 (89%), Positives = 222/235 (94%), Gaps = 5/235 (2%) Query: 1 MLTRKQYELLRFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR 60 MLTRKQYELLRFI+ERLKE+GVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR Sbjct: 1 MLTRKQYELLRFISERLKESGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR 60 Query: 61 ARAIEVIKLPELSAGGGNGRRGFTPSVIEGTLGR-RASTPPIAEDDGNRPVAVPVMGRIA 119 ARAIEVIKLPEL A GN RRGFTPSVIEG LG+ RAS+ + D+G RPVAVPVMGRIA Sbjct: 61 ARAIEVIKLPELQAAAGN-RRGFTPSVIEGNLGKVRASS---SADEGERPVAVPVMGRIA 116 Query: 120 AGTPIEALQTRSHTISVPPDMLGAGEHYALEVRGDSMVDAGILDGDMALIQRNDVANTGD 179 AGTPIEALQTRSHTISVPPDMLG+GEHYALEVRGDSMV+AGILDGDMALIQRN+ A+TGD Sbjct: 117 AGTPIEALQTRSHTISVPPDMLGSGEHYALEVRGDSMVEAGILDGDMALIQRNESADTGD 176 Query: 180 IVVALIDEEEATLKRFRRRGASIALEPANTAYEVRILPPNRVRIQGKLIGLYRKY 234 IVVALID+EEATLKRFRRRGASIALEPAN AYEVRILPPNRV+IQGKLIGLYRKY Sbjct: 177 IVVALIDDEEATLKRFRRRGASIALEPANAAYEVRILPPNRVKIQGKLIGLYRKY 231 >ref|YP_004108921.1| LexA family transcriptional repressor [Rhodopseudomonas palustris DX-1] gb|ADU44188.1| transcriptional repressor, LexA family [Rhodopseudomonas palustris DX-1] Length = 236 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 210/236 (88%), Positives = 221/236 (93%), Gaps = 2/236 (0%) Query: 1 MLTRKQYELLRFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR 60 MLTRKQ+ELL+FINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR Sbjct: 1 MLTRKQFELLKFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR 60 Query: 61 ARAIEVIKLPELSAGGGNGRRGFTPSVIEGTLGR-RASTPPIAEDDGNR-PVAVPVMGRI 118 ARAIEVIKLP+ S GN RRGFTPSVIEG LG+ R +P +EDDG+R VAVPVMGRI Sbjct: 61 ARAIEVIKLPDTSGMPGNARRGFTPSVIEGNLGKVRPPSPVPSEDDGDRGSVAVPVMGRI 120 Query: 119 AAGTPIEALQTRSHTISVPPDMLGAGEHYALEVRGDSMVDAGILDGDMALIQRNDVANTG 178 AAGTPIEALQTRSHT+SVP DMLG+GEHYALEVRGDSMV+AGILDGDMALIQ+NDVANTG Sbjct: 121 AAGTPIEALQTRSHTVSVPADMLGSGEHYALEVRGDSMVEAGILDGDMALIQKNDVANTG 180 Query: 179 DIVVALIDEEEATLKRFRRRGASIALEPANTAYEVRILPPNRVRIQGKLIGLYRKY 234 DIVVALIDEEEATLKRFRRRGASIALEPAN AYEVRILPPNRVRIQGKLIGLYRKY Sbjct: 181 DIVVALIDEEEATLKRFRRRGASIALEPANAAYEVRILPPNRVRIQGKLIGLYRKY 236 >ref|YP_486422.1| LexA repressor [Rhodopseudomonas palustris HaA2] sp|Q2IW99.1|LEXA_RHOP2 RecName: Full=LexA repressor gb|ABD07511.1| SOS-response transcriptional repressor, LexA [Rhodopseudomonas palustris HaA2] Length = 234 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 209/235 (88%), Positives = 220/235 (93%), Gaps = 2/235 (0%) Query: 1 MLTRKQYELLRFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR 60 MLTRKQ+ELL+FINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR Sbjct: 1 MLTRKQFELLKFINERLKEAGVPPSFDEMKDALDLRSKSGIHRLITALEERGFIRRLPNR 60 Query: 61 ARAIEVIKLPELSAGGGNGRRGFTPSVIEGTLGR-RASTPPIAEDDGNRPVAVPVMGRIA 119 ARAIEVIKLP+L G RRGFTPSVIEG LG+ R +P AEDD +R VAVPVMGRIA Sbjct: 61 ARAIEVIKLPDLGGNSG-ARRGFTPSVIEGNLGKVRPPSPQHAEDDSDRNVAVPVMGRIA 119 Query: 120 AGTPIEALQTRSHTISVPPDMLGAGEHYALEVRGDSMVDAGILDGDMALIQRNDVANTGD 179 AGTPIEALQTRSHTISVPPDMLG+GEHYALEVRGDSM+DAGILDGDMALIQRN+ A+TGD Sbjct: 120 AGTPIEALQTRSHTISVPPDMLGSGEHYALEVRGDSMMDAGILDGDMALIQRNESADTGD 179 Query: 180 IVVALIDEEEATLKRFRRRGASIALEPANTAYEVRILPPNRVRIQGKLIGLYRKY 234 IVVALIDEEEATLKRFRRRGASIALEPAN+AYEVRILPPNRVRIQGKLIGLYRKY Sbjct: 180 IVVALIDEEEATLKRFRRRGASIALEPANSAYEVRILPPNRVRIQGKLIGLYRKY 234