BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0096.0021.p (391 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_576987.1| ComEC/Rec2-related protein [Nitrobacter hamburg... 426 e-117 ref|NP_771470.1| hypothetical protein bll4830 [Bradyrhizobium ja... 419 e-115 ref|YP_001240436.1| putative ComEC/Rec2 family protein [Bradyrhi... 407 e-111 ref|NP_948245.1| ComEC/Rec2-like protein [Rhodopseudomonas palus... 401 e-109 ref|YP_532323.1| ComEC/Rec2-like protein [Rhodopseudomonas palus... 398 e-109 >ref|YP_576987.1| ComEC/Rec2-related protein [Nitrobacter hamburgensis X14] gb|ABE62527.1| ComEC/Rec2-related protein [Nitrobacter hamburgensis X14] Length = 413 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 239/339 (70%), Positives = 260/339 (76%), Gaps = 5/339 (1%) Query: 1 MAEQGTTPGGKRGYAGTWPPRAAAPAGGYFPARV--GIWKPVVETLRRWAGAEAGAGRLL 58 M E+G GYAGTWP R A A P++ G +V LR WA AEAGAGRLL Sbjct: 1 MPERGRARDRAGGYAGTWPSRQAVAAS---PSQTPSGTLPALVARLRAWARAEAGAGRLL 57 Query: 59 PWVPVAFGTGIAFYFAAEHEPVLSVAATVAILLCLLALLLRRRSVFPVIAMLAAVAAGFA 118 PWVPVAFG GIA YF+A+HEP+ V A A LC+ ALLLRR +FP M+AA+A GFA Sbjct: 58 PWVPVAFGAGIAIYFSADHEPIAWVVAATAGALCVAALLLRRHRLFPAAVMIAAMATGFA 117 Query: 119 TATWKTARVAHTVLARPMFSVALTGFVEARDIREKTDRFVLRVVSMESPRDMTKLDRVRL 178 AT TARVAH VL RPM+S + GFVE R++RE+TDRFVLRVV M+ P KLDRVRL Sbjct: 118 VATVNTARVAHVVLTRPMYSPLIKGFVETREVRERTDRFVLRVVRMDDPWRHVKLDRVRL 177 Query: 179 SVKKGTAPDVGSFVELKARLLPPLGPQRPGSYDFGRDLYFQGIGASGFVMGAVKTREPPA 238 SVKKGTAP VGSFVELKARL PPL P RPGSYDF RD+YFQGIGASGFVMGA+K PP Sbjct: 178 SVKKGTAPAVGSFVELKARLQPPLTPLRPGSYDFARDMYFQGIGASGFVMGAIKIVNPPR 237 Query: 239 TGGFALRYAAFMQGLRDAIDARIRTTLDGDQRAIATALLTGRRDAISTPVNDAMFISGLG 298 GG ALRYAA MQ +RDAIDARIR L GD RAIATALLTGRRDAI+TPVNDAMFISGLG Sbjct: 238 GGGIALRYAALMQEMRDAIDARIRLVLSGDSRAIATALLTGRRDAITTPVNDAMFISGLG 297 Query: 299 HVLSISGYHMAVVASVVFFAVRALLALFPALTAGHPIKK 337 HVLSISGYHMAVVA VVFFAVRALLAL PALTA PIKK Sbjct: 298 HVLSISGYHMAVVAGVVFFAVRALLALIPALTATFPIKK 336 >ref|NP_771470.1| hypothetical protein bll4830 [Bradyrhizobium japonicum USDA 110] dbj|BAC50095.1| bll4830 [Bradyrhizobium japonicum USDA 110] Length = 776 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 246/337 (72%), Positives = 276/337 (81%), Gaps = 1/337 (0%) Query: 1 MAEQGTTPGGKRGYAGTWPPRAAAPAGGYFPARVGIWKPVVETLRRWAGAEAGAGRLLPW 60 MAE G P +G AGTWP AAPAGG+ PA G W +VE LR W AEAGAGRLLPW Sbjct: 18 MAEPGR-PARSQGIAGTWPVGRAAPAGGFAPAGFGAWPALVEALRAWMRAEAGAGRLLPW 76 Query: 61 VPVAFGTGIAFYFAAEHEPVLSVAATVAILLCLLALLLRRRSVFPVIAMLAAVAAGFATA 120 VPVAFG+GIA YF A+HEPVL V A +A L L A+LLRR +F M+AA+AAGFA A Sbjct: 77 VPVAFGSGIALYFTADHEPVLWVVAAIAAALMLGAVLLRRSRLFAPAIMIAAIAAGFAVA 136 Query: 121 TWKTARVAHTVLARPMFSVALTGFVEARDIREKTDRFVLRVVSMESPRDMTKLDRVRLSV 180 TWKTAR+AHTVLA+P++SVAL+GFVE RDIRE+TDRFVLRV +ME+ R KL+RVRLSV Sbjct: 137 TWKTARIAHTVLAKPLYSVALSGFVETRDIRERTDRFVLRVAAMEAQRSEVKLERVRLSV 196 Query: 181 KKGTAPDVGSFVELKARLLPPLGPQRPGSYDFGRDLYFQGIGASGFVMGAVKTREPPATG 240 +KGTAP+VGSFV+LKARL+PP+ P RPGSYDF RD++FQGIGASGFVMGA+ PP G Sbjct: 197 RKGTAPEVGSFVQLKARLMPPISPVRPGSYDFSRDMFFQGIGASGFVMGAIAAAVPPDAG 256 Query: 241 GFALRYAAFMQGLRDAIDARIRTTLDGDQRAIATALLTGRRDAISTPVNDAMFISGLGHV 300 G LRYAAFMQGLRDAIDAR+R TL+GD RAIATALLTGRRDAI+TPVNDAMFISGLGHV Sbjct: 257 GLRLRYAAFMQGLRDAIDARVRATLEGDNRAIATALLTGRRDAITTPVNDAMFISGLGHV 316 Query: 301 LSISGYHMAVVASVVFFAVRALLALFPALTAGHPIKK 337 LSISGYHMAVVA VVFFAVRALLAL P L G PIKK Sbjct: 317 LSISGYHMAVVAGVVFFAVRALLALIPGLAVGFPIKK 353 >ref|YP_001240436.1| putative ComEC/Rec2 family protein [Bradyrhizobium sp. BTAi1] gb|ABQ36530.1| putative ComEC/Rec2 family protein [Bradyrhizobium sp. BTAi1] Length = 762 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 234/341 (68%), Positives = 262/341 (76%), Gaps = 5/341 (1%) Query: 1 MAEQGTTPGGKRGYAGT----WPPRAAAPAGGYFPARVGIWKPVVETLRRWAGAEAGAGR 56 MAE PG +RG AG WPPR A GG+ W + L RW EAGAGR Sbjct: 1 MAEPARPPGWRRGIAGVMADVWPPRGAR-TGGWPEVGADAWPSLSAHLTRWTREEAGAGR 59 Query: 57 LLPWVPVAFGTGIAFYFAAEHEPVLSVAATVAILLCLLALLLRRRSVFPVIAMLAAVAAG 116 LLPWVPVAFG GIA YFAA+HEP L + A+LLC++A+L+RR +FP M+AA A+G Sbjct: 60 LLPWVPVAFGAGIAVYFAADHEPALWASVPTALLLCIVAVLMRRHPLFPAAVMIAAAASG 119 Query: 117 FATATWKTARVAHTVLARPMFSVALTGFVEARDIREKTDRFVLRVVSMESPRDMTKLDRV 176 +A AT KTARVAH VL RP++SVAL+GFVEARDIRE++DR VLRV +MES R L RV Sbjct: 120 YAVATSKTARVAHPVLPRPLYSVALSGFVEARDIRERSDRIVLRVTAMESDRHAITLTRV 179 Query: 177 RLSVKKGTAPDVGSFVELKARLLPPLGPQRPGSYDFGRDLYFQGIGASGFVMGAVKTREP 236 RL+V+KGTAPDVGSFV+LKARLLPPL P RPGSYDF RD++FQGIGASGFVMG + T P Sbjct: 180 RLAVRKGTAPDVGSFVQLKARLLPPLAPVRPGSYDFARDMFFQGIGASGFVMGGITTLTP 239 Query: 237 PATGGFALRYAAFMQGLRDAIDARIRTTLDGDQRAIATALLTGRRDAISTPVNDAMFISG 296 P GGF LRY A MQGLRDAIDARIR LDGD+RAIATALLTGRRDAI+ VNDAMFISG Sbjct: 240 PQEGGFGLRYGAAMQGLRDAIDARIRARLDGDERAIATALLTGRRDAITPDVNDAMFISG 299 Query: 297 LGHVLSISGYHMAVVASVVFFAVRALLALFPALTAGHPIKK 337 LGHVLSISGYHMAVVA VVFFAVRALLAL P LT PIKK Sbjct: 300 LGHVLSISGYHMAVVAGVVFFAVRALLALIPGLTVSLPIKK 340 >ref|NP_948245.1| ComEC/Rec2-like protein [Rhodopseudomonas palustris CGA009] emb|CAE28345.1| possible DNA uptake protein, ComEC [Rhodopseudomonas palustris CGA009] Length = 755 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 225/328 (68%), Positives = 248/328 (75%), Gaps = 3/328 (0%) Query: 11 KRGYAGTWPPRAAAPAGGYFPARVGIWKPVV-ETLRRWAGAEAGAGRLLPWVPVAFGTGI 69 R A TWP RA A AG P + W P + LR W AEAG GRLLPW PVAFG GI Sbjct: 5 DRTRARTWPTRAPAGAGALLPFGLS-WGPAFFDLLRDWVRAEAGPGRLLPWTPVAFGAGI 63 Query: 70 AFYFAAEHEPVLSVAATVAILLCLLALLLRRRSVFPVIAMLAAVAAGFATATWKTARVAH 129 A YFAA+HEPV VAA A + A+LLRR F + +L A+ AGFATA+ K AR+AH Sbjct: 64 ALYFAADHEPVAWVAAATAAGFVIAAVLLRRSRAFAPVLLLTALLAGFATASLKAARIAH 123 Query: 130 TVLARPMFSVALTGFVEARDIREKTDRFVLRVVSMESPRDMTKLDRVRLSVKKGTAPDVG 189 VLA P+F+ L GFVE R+ RE+TDRFVLRV M++ R T L+RVRLSVKKGTAP VG Sbjct: 124 PVLAAPVFAAELRGFVEIREERERTDRFVLRVTQMQAARAPT-LERVRLSVKKGTAPTVG 182 Query: 190 SFVELKARLLPPLGPQRPGSYDFGRDLYFQGIGASGFVMGAVKTREPPATGGFALRYAAF 249 SFV LKARL PPL P RPGSYDF RDLYFQGI ASGFV+GA+ T EPP GG+ LRYAA Sbjct: 183 SFVTLKARLQPPLQPLRPGSYDFARDLYFQGIAASGFVLGAITTTEPPQDGGWRLRYAAV 242 Query: 250 MQGLRDAIDARIRTTLDGDQRAIATALLTGRRDAISTPVNDAMFISGLGHVLSISGYHMA 309 MQGLRDAIDARIR +L GD RAIATALLTG+RDAISTPVNDAMFISGLGHVLSISGYHMA Sbjct: 243 MQGLRDAIDARIRASLGGDPRAIATALLTGKRDAISTPVNDAMFISGLGHVLSISGYHMA 302 Query: 310 VVASVVFFAVRALLALFPALTAGHPIKK 337 VVA VVFFA+RALLAL P LT PIKK Sbjct: 303 VVAGVVFFALRALLALIPRLTVTFPIKK 330 >ref|YP_532323.1| ComEC/Rec2-like protein [Rhodopseudomonas palustris BisB18] gb|ABD88004.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisB18] Length = 774 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 233/339 (68%), Positives = 257/339 (75%), Gaps = 2/339 (0%) Query: 1 MAEQGTT--PGGKRGYAGTWPPRAAAPAGGYFPARVGIWKPVVETLRRWAGAEAGAGRLL 58 M+E G + G R A TWP AA A G P V W+ ++E LR WA AEAGAGRLL Sbjct: 1 MSEAGNSRPKTGARAGARTWPLGEAARAAGLVPFGVRAWQALIERLRGWAHAEAGAGRLL 60 Query: 59 PWVPVAFGTGIAFYFAAEHEPVLSVAATVAILLCLLALLLRRRSVFPVIAMLAAVAAGFA 118 PWVPV+FG GIA YFAA+HEP+ VAA A A+ LRR+ VF + ++AA+AAGFA Sbjct: 61 PWVPVSFGAGIALYFAADHEPIAWVAALAAAGFGAAAVALRRQRVFALAVLIAALAAGFA 120 Query: 119 TATWKTARVAHTVLARPMFSVALTGFVEARDIREKTDRFVLRVVSMESPRDMTKLDRVRL 178 T K R+AH VLARPM SV L GFVE + R+KTDRFVLR+ M+ RD K +RVRL Sbjct: 121 TVALKANRIAHGVLARPMHSVGLQGFVETHEERDKTDRFVLRITQMDVSRDPIKFERVRL 180 Query: 179 SVKKGTAPDVGSFVELKARLLPPLGPQRPGSYDFGRDLYFQGIGASGFVMGAVKTREPPA 238 SVKKGTAP VGSFVELKARL PPL P RPG+YDFGRDLYFQ I A+GFVMGA+K R PP Sbjct: 181 SVKKGTAPQVGSFVELKARLTPPLQPLRPGAYDFGRDLYFQNIAATGFVMGAIKPRPPPG 240 Query: 239 TGGFALRYAAFMQGLRDAIDARIRTTLDGDQRAIATALLTGRRDAISTPVNDAMFISGLG 298 GFALRYAA MQGLRDAIDARIR TL GD RAIATALLTGRRDAIS PVNDAMF+SGLG Sbjct: 241 EIGFALRYAATMQGLRDAIDARIRLTLSGDNRAIATALLTGRRDAISVPVNDAMFVSGLG 300 Query: 299 HVLSISGYHMAVVASVVFFAVRALLALFPALTAGHPIKK 337 HVLSISGYHMAVVA VVFFAVRALLAL PALT PIKK Sbjct: 301 HVLSISGYHMAVVAGVVFFAVRALLALIPALTVTFPIKK 339