BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0096.0012.p (433 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771479.1| type II citrate synthase [Bradyrhizobium japoni... 846 0.0 ref|YP_001206103.1| type II citrate synthase [Bradyrhizobium sp.... 845 0.0 gb|AAB39736.1| citrate synthase [Bradyrhizobium japonicum] 842 0.0 ref|YP_001240440.1| type II citrate synthase [Bradyrhizobium sp.... 840 0.0 ref|ZP_01047945.1| citrate synthase [Nitrobacter sp. Nb-311A] >g... 810 0.0 >ref|NP_771479.1| type II citrate synthase [Bradyrhizobium japonicum USDA 110] sp|P94325.2|CISY_BRAJA RecName: Full=Citrate synthase dbj|BAC50104.1| citrate synthase [Bradyrhizobium japonicum USDA 110] Length = 434 Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/434 (92%), Positives = 418/434 (96%), Gaps = 1/434 (0%) Query: 1 MDAKSS-KTATLTIGNKNYDFPILSGTVGPDVIDIGKLYGQAGVFTYDPGFTSTGSCQSK 59 MDAK+S KTATLT+GNKNYD PI SG+VGPDVIDIGKLYGQ+G+FTYDPGFTST SCQSK Sbjct: 1 MDAKASNKTATLTVGNKNYDLPIHSGSVGPDVIDIGKLYGQSGLFTYDPGFTSTASCQSK 60 Query: 60 ITYIDGDAGVLEYRGYPIEQLAEHGDFLETCYLLLYGDLPTPAQKKDFDYRVIHHTMVHE 119 ITYIDGDAGVLEYRGYPIEQLAE+GDFLETCYLLLYG+LPT AQKKDFD RVIHHTMVHE Sbjct: 61 ITYIDGDAGVLEYRGYPIEQLAENGDFLETCYLLLYGNLPTAAQKKDFDDRVIHHTMVHE 120 Query: 120 QMARFFQGFRRDAHPMAIMVAAVGALAAFYHDSTDINDPRQRMIASMRMIAKVPTLAAMA 179 QMARFFQGFRRDAHPMA+MVA+VGALAAFYHDSTDINDP+QRMIASMRMIAK+PTLAAMA Sbjct: 121 QMARFFQGFRRDAHPMAVMVASVGALAAFYHDSTDINDPKQRMIASMRMIAKIPTLAAMA 180 Query: 180 YKYTIGQPFVYPKNSLSFAENFLNMCFAVPCEEYKINPVLADALDKIFILHADHEQNAST 239 YKYTIGQPFVYPKNSL FAENFL+MCFAVPCEEYKINPVLADALDKIFILHADHEQNAST Sbjct: 181 YKYTIGQPFVYPKNSLKFAENFLHMCFAVPCEEYKINPVLADALDKIFILHADHEQNAST 240 Query: 240 STVRIAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLYDIGKVENIPDFIAKVKDKN 299 STVRIAGSSGANPFACIAAGIACLWGPAHGGANEAAL ML +IG V+ IP+FIAKVKDKN Sbjct: 241 STVRIAGSSGANPFACIAAGIACLWGPAHGGANEAALAMLAEIGSVDKIPEFIAKVKDKN 300 Query: 300 SEVRLMGFGHRVYKNYDPRAKIMQKMCHAVLKETGHGDDPMLKVAMELEKIALSDPYFID 359 SEVRLMGFGHRVYKNYDPRAKIMQKMCHAVLKETGHGDDPMLKVAMELEKIALSD YFID Sbjct: 301 SEVRLMGFGHRVYKNYDPRAKIMQKMCHAVLKETGHGDDPMLKVAMELEKIALSDQYFID 360 Query: 360 RKLYPNVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYT 419 RKLYPNVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYT Sbjct: 361 RKLYPNVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYT 420 Query: 420 GVARRDYVQIDKRK 433 GV RRDYV I RK Sbjct: 421 GVTRRDYVAIKDRK 434 >ref|YP_001206103.1| type II citrate synthase [Bradyrhizobium sp. ORS 278] emb|CAL77878.1| citrate synthase [Bradyrhizobium sp. ORS 278] Length = 434 Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/433 (92%), Positives = 417/433 (96%), Gaps = 1/433 (0%) Query: 1 MDAKS-SKTATLTIGNKNYDFPILSGTVGPDVIDIGKLYGQAGVFTYDPGFTSTGSCQSK 59 MDAKS SKTATLT+GNKNYD PILSGTVGPDVIDIGKLY QAG+FTYDPGFTSTGSCQSK Sbjct: 1 MDAKSESKTATLTVGNKNYDLPILSGTVGPDVIDIGKLYAQAGMFTYDPGFTSTGSCQSK 60 Query: 60 ITYIDGDAGVLEYRGYPIEQLAEHGDFLETCYLLLYGDLPTPAQKKDFDYRVIHHTMVHE 119 ITYIDGDAGVLEYRGYPIEQLAE GDFLETCYLLLYG+LPTPAQKKDFDYRV HHTMVHE Sbjct: 61 ITYIDGDAGVLEYRGYPIEQLAEKGDFLETCYLLLYGELPTPAQKKDFDYRVTHHTMVHE 120 Query: 120 QMARFFQGFRRDAHPMAIMVAAVGALAAFYHDSTDINDPRQRMIASMRMIAKVPTLAAMA 179 QMARFFQGFRRDAHPMA+MVA+VGALAAFYHDSTDINDP+QRMIAS+RMIAK+PTLAAMA Sbjct: 121 QMARFFQGFRRDAHPMAVMVASVGALAAFYHDSTDINDPKQRMIASIRMIAKIPTLAAMA 180 Query: 180 YKYTIGQPFVYPKNSLSFAENFLNMCFAVPCEEYKINPVLADALDKIFILHADHEQNAST 239 YKY+IGQPFVYPKN+LSF+ENFLNMCFAVPCEEYK NPVLA+ALDKIFILHADHEQNAST Sbjct: 181 YKYSIGQPFVYPKNALSFSENFLNMCFAVPCEEYKPNPVLANALDKIFILHADHEQNAST 240 Query: 240 STVRIAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLYDIGKVENIPDFIAKVKDKN 299 STVRIAGSSGANPFACIAAGIACLWGPAHGGANEAALNML +IG V+ IP+FIAKVKDKN Sbjct: 241 STVRIAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLAEIGTVDKIPEFIAKVKDKN 300 Query: 300 SEVRLMGFGHRVYKNYDPRAKIMQKMCHAVLKETGHGDDPMLKVAMELEKIALSDPYFID 359 S+VRLMGFGHRVYKNYDPRAKIMQKMCHAVLKETGH DD MLKVAMELEKIALSD YFID Sbjct: 301 SDVRLMGFGHRVYKNYDPRAKIMQKMCHAVLKETGHADDQMLKVAMELEKIALSDQYFID 360 Query: 360 RKLYPNVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYT 419 RKLYPNVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYT Sbjct: 361 RKLYPNVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYT 420 Query: 420 GVARRDYVQIDKR 432 GV R Y+ IDKR Sbjct: 421 GVTTRQYIDIDKR 433 >gb|AAB39736.1| citrate synthase [Bradyrhizobium japonicum] Length = 434 Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/434 (92%), Positives = 417/434 (96%), Gaps = 1/434 (0%) Query: 1 MDAKSS-KTATLTIGNKNYDFPILSGTVGPDVIDIGKLYGQAGVFTYDPGFTSTGSCQSK 59 MDAK+S KTATLT+GNKNYD PI SG+VGPDVIDIGKLYGQ+G+FTYDPGFTST SCQSK Sbjct: 1 MDAKASNKTATLTVGNKNYDLPIHSGSVGPDVIDIGKLYGQSGLFTYDPGFTSTASCQSK 60 Query: 60 ITYIDGDAGVLEYRGYPIEQLAEHGDFLETCYLLLYGDLPTPAQKKDFDYRVIHHTMVHE 119 ITYIDGDAGVLEYRGYPIEQLAE+GDFLETCYLLLYG+LPT AQKKDFD RVIHHTMVHE Sbjct: 61 ITYIDGDAGVLEYRGYPIEQLAENGDFLETCYLLLYGNLPTAAQKKDFDDRVIHHTMVHE 120 Query: 120 QMARFFQGFRRDAHPMAIMVAAVGALAAFYHDSTDINDPRQRMIASMRMIAKVPTLAAMA 179 QMARFFQGFRRDAHPMA+MVA+VGALAAFYHDSTDINDP+QRMIASMRMIAK+PTLAAMA Sbjct: 121 QMARFFQGFRRDAHPMAVMVASVGALAAFYHDSTDINDPKQRMIASMRMIAKIPTLAAMA 180 Query: 180 YKYTIGQPFVYPKNSLSFAENFLNMCFAVPCEEYKINPVLADALDKIFILHADHEQNAST 239 YKYTIGQPFVYPKNSL FAENFL+MCFAV CEEYKINPVLADALDKIFILHADHEQNAST Sbjct: 181 YKYTIGQPFVYPKNSLKFAENFLHMCFAVSCEEYKINPVLADALDKIFILHADHEQNAST 240 Query: 240 STVRIAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLYDIGKVENIPDFIAKVKDKN 299 STVRIAGSSGANPFACIAAGIACLWGPAHGGANEAAL ML +IG V+ IP+FIAKVKDKN Sbjct: 241 STVRIAGSSGANPFACIAAGIACLWGPAHGGANEAALAMLGEIGSVDKIPEFIAKVKDKN 300 Query: 300 SEVRLMGFGHRVYKNYDPRAKIMQKMCHAVLKETGHGDDPMLKVAMELEKIALSDPYFID 359 SEVRLMGFGHRVYKNYDPRAKIMQKMCHAVLKETGHGDDPMLKVA+ELEKIALSD YFID Sbjct: 301 SEVRLMGFGHRVYKNYDPRAKIMQKMCHAVLKETGHGDDPMLKVALELEKIALSDQYFID 360 Query: 360 RKLYPNVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYT 419 RKLYPNVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYT Sbjct: 361 RKLYPNVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYT 420 Query: 420 GVARRDYVQIDKRK 433 GV RRDYV I RK Sbjct: 421 GVTRRDYVAIKDRK 434 >ref|YP_001240440.1| type II citrate synthase [Bradyrhizobium sp. BTAi1] gb|ABQ36534.1| citrate synthase [Bradyrhizobium sp. BTAi1] Length = 434 Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/433 (91%), Positives = 417/433 (96%), Gaps = 1/433 (0%) Query: 1 MDAKS-SKTATLTIGNKNYDFPILSGTVGPDVIDIGKLYGQAGVFTYDPGFTSTGSCQSK 59 MDAKS SKTATLT+GNKN+D PILSGTVGPDVIDIGKLY Q G+FTYDPGFTSTGSCQSK Sbjct: 1 MDAKSASKTATLTVGNKNFDLPILSGTVGPDVIDIGKLYAQTGMFTYDPGFTSTGSCQSK 60 Query: 60 ITYIDGDAGVLEYRGYPIEQLAEHGDFLETCYLLLYGDLPTPAQKKDFDYRVIHHTMVHE 119 ITYIDGDAGVLEYRGYPIEQLAE GDFLETCYLLLYG+LPT AQKKDFDYRV HHTMVHE Sbjct: 61 ITYIDGDAGVLEYRGYPIEQLAEKGDFLETCYLLLYGELPTAAQKKDFDYRVTHHTMVHE 120 Query: 120 QMARFFQGFRRDAHPMAIMVAAVGALAAFYHDSTDINDPRQRMIASMRMIAKVPTLAAMA 179 QM+RFF GFRRDAHPMA+MVA+VGALAAFYHDSTDINDP+QRMIASMRMIAK+PTLAAMA Sbjct: 121 QMSRFFHGFRRDAHPMAVMVASVGALAAFYHDSTDINDPKQRMIASMRMIAKIPTLAAMA 180 Query: 180 YKYTIGQPFVYPKNSLSFAENFLNMCFAVPCEEYKINPVLADALDKIFILHADHEQNAST 239 YKYTIGQPFVYPKN+LSFAENFL+MCFAVPCE+YK NPVLADALDKIFILHADHEQNAST Sbjct: 181 YKYTIGQPFVYPKNALSFAENFLHMCFAVPCEDYKPNPVLADALDKIFILHADHEQNAST 240 Query: 240 STVRIAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLYDIGKVENIPDFIAKVKDKN 299 STVRIAGSSGANPFACIAAGIACLWGPAHGGANEAALNML +IG V+ IP+FIAKVKDKN Sbjct: 241 STVRIAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLAEIGTVDKIPEFIAKVKDKN 300 Query: 300 SEVRLMGFGHRVYKNYDPRAKIMQKMCHAVLKETGHGDDPMLKVAMELEKIALSDPYFID 359 S+VRLMGFGHRVYKNYDPRAKIMQKMCHAVLKETGH DD MLKVA+ELEKIALSD YFID Sbjct: 301 SDVRLMGFGHRVYKNYDPRAKIMQKMCHAVLKETGHADDQMLKVALELEKIALSDQYFID 360 Query: 360 RKLYPNVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYT 419 RKLYPNVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYT Sbjct: 361 RKLYPNVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYT 420 Query: 420 GVARRDYVQIDKR 432 GVA R+YV+IDKR Sbjct: 421 GVATRNYVEIDKR 433 >ref|ZP_01047945.1| citrate synthase [Nitrobacter sp. Nb-311A] gb|EAQ34079.1| citrate synthase [Nitrobacter sp. Nb-311A] Length = 433 Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/432 (87%), Positives = 401/432 (92%) Query: 1 MDAKSSKTATLTIGNKNYDFPILSGTVGPDVIDIGKLYGQAGVFTYDPGFTSTGSCQSKI 60 M+A S+KTATLT+ NK Y+FP+LSGTVGPDVIDIGKLY QAG+FTYDP FTST SCQS I Sbjct: 1 MNATSTKTATLTVDNKTYEFPVLSGTVGPDVIDIGKLYAQAGMFTYDPAFTSTASCQSTI 60 Query: 61 TYIDGDAGVLEYRGYPIEQLAEHGDFLETCYLLLYGDLPTPAQKKDFDYRVIHHTMVHEQ 120 TYIDGD GVLEYRGYPIEQLAE GDFLETCYLLLYG+LPT +QK DFD RV HHTMVHEQ Sbjct: 61 TYIDGDEGVLEYRGYPIEQLAEKGDFLETCYLLLYGELPTKSQKNDFDERVTHHTMVHEQ 120 Query: 121 MARFFQGFRRDAHPMAIMVAAVGALAAFYHDSTDINDPRQRMIASMRMIAKVPTLAAMAY 180 M RFFQ FRRDAHPMA+MVAAVGALAAFYHDSTDINDP+QRM+ASMRMIAK+PTLAAMAY Sbjct: 121 MTRFFQSFRRDAHPMAVMVAAVGALAAFYHDSTDINDPKQRMVASMRMIAKMPTLAAMAY 180 Query: 181 KYTIGQPFVYPKNSLSFAENFLNMCFAVPCEEYKINPVLADALDKIFILHADHEQNASTS 240 KYTIGQPF+YP NSLSFAENFL+MCFAVPCE Y INPVLADALDKIFILHADHEQNASTS Sbjct: 181 KYTIGQPFIYPNNSLSFAENFLHMCFAVPCENYNINPVLADALDKIFILHADHEQNASTS 240 Query: 241 TVRIAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLYDIGKVENIPDFIAKVKDKNS 300 TVRIAGSSGANPFACIAAGIACLWGPAHGGANEAAL ML +IG V+ IPDFI +VKDKNS Sbjct: 241 TVRIAGSSGANPFACIAAGIACLWGPAHGGANEAALTMLSEIGTVDRIPDFIDRVKDKNS 300 Query: 301 EVRLMGFGHRVYKNYDPRAKIMQKMCHAVLKETGHGDDPMLKVAMELEKIALSDPYFIDR 360 +VRLMGFGHRVYKNYDPRAKIMQKMCHAVL ETGHG+DPMLKVA+ELEKIAL+D YFI+R Sbjct: 301 DVRLMGFGHRVYKNYDPRAKIMQKMCHAVLNETGHGNDPMLKVALELEKIALNDEYFINR 360 Query: 361 KLYPNVDFYSGITLKAMGFPVSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYTG 420 KLYPNVDFYSG+TLKAMGFP SMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYTG Sbjct: 361 KLYPNVDFYSGLTLKAMGFPTSMFTVLFAVARTVGWISQWSEMIEDPQQKIGRPRQLYTG 420 Query: 421 VARRDYVQIDKR 432 RRDY+ + R Sbjct: 421 ATRRDYIDMTHR 432