BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0096.0009.p (392 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771487.1| lipid-A-disaccharide synthase [Bradyrhizobium j... 586 e-165 ref|YP_004108916.1| lipid-A-disaccharide synthase [Rhodopseudomo... 556 e-156 ref|YP_001992232.1| lipid-A-disaccharide synthase [Rhodopseudomo... 555 e-156 ref|NP_948250.1| lipid-A-disaccharide synthase [Rhodopseudomonas... 552 e-155 ref|YP_781484.1| lipid-A-disaccharide synthase [Rhodopseudomonas... 537 e-150 >ref|NP_771487.1| lipid-A-disaccharide synthase [Bradyrhizobium japonicum USDA 110] sp|Q89KQ7.1|LPXB_BRAJA RecName: Full=Lipid-A-disaccharide synthase dbj|BAC50112.1| lipid A-disaccharide synthase [Bradyrhizobium japonicum USDA 110] Length = 392 Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust. Identities = 308/393 (78%), Positives = 337/393 (85%), Gaps = 5/393 (1%) Query: 1 MQVRSPSTVRKIFLIATEESGDRLGAALMQVLRQRLGDAVQFSGVGGQAMAAQGIASLFP 60 MQ R P RKIFLIATEESGDRLG+ALM+VLRQRLGD VQF GVGG+ MA +G+ +LFP Sbjct: 2 MQGRDPK--RKIFLIATEESGDRLGSALMKVLRQRLGDGVQFEGVGGRTMAREGLETLFP 59 Query: 61 IEELSIMGFAAVVKQLPKILRLIRRTADAVLADAPDMLVIIDSPDFTHRVARRVRARNPN 120 IEELSI+GFAAVV+QLPKILRLIR TADAVL PD LVIIDSPDFTHRVARRVRARNP Sbjct: 60 IEELSIVGFAAVVQQLPKILRLIRETADAVLEAVPDALVIIDSPDFTHRVARRVRARNPA 119 Query: 121 IPIVDYVSPSVWAWRPGRARAMQRYVDHVLALLPFEPEEYRKLQGPPCSYVGHPLTEQLA 180 IPIVDYVSP +WAWRPGRAR M YVDHVL LLPFEPEEYRKL GPPCSYVGHPL EQL Sbjct: 120 IPIVDYVSPQLWAWRPGRARTMLGYVDHVLGLLPFEPEEYRKLGGPPCSYVGHPLIEQLG 179 Query: 181 SLRPNEDEQKRRDAQPPVLLVLPGSRRSEIRHHLALFGTALGQLSKQT-PFELVLPTMPH 239 SLRPN +EQKRR+++ PVLLVLPGSRRSEIRHH+ +FG ALG+L + FEL+LPTMPH Sbjct: 180 SLRPNAEEQKRRNSELPVLLVLPGSRRSEIRHHIEVFGAALGRLQAEGRAFELMLPTMPH 239 Query: 240 LEAMVREGVASWPVVPRLAIGETEKRAAFRVARAALAKSGTVTLELALSGIPMVTAYRVG 299 LEA VREG+ASWPV P++ IGE EKRAAFR+A AALAKSGTVTLELALSGIPMVTAYRVG Sbjct: 240 LEATVREGIASWPVKPQIVIGEAEKRAAFRIAHAALAKSGTVTLELALSGIPMVTAYRVG 299 Query: 300 AAEAFILRRAIRVSSVILANLVIGSDIIPEFLQEDCTPDKLAAALRDVLADSPDRLRQLV 359 A EAFILRRAIRVSSVILANLVIG D+IPEFLQEDCTP+KLA AL +VL DS R RQ+ Sbjct: 300 AIEAFILRRAIRVSSVILANLVIGEDVIPEFLQEDCTPEKLAPALSEVLTDSDMRRRQVE 359 Query: 360 GFATMDGKMSTGDQPPSVRAADIVLAEM--GRR 390 FA +D MSTG++ PSV AADIVLA M GRR Sbjct: 360 AFARLDTIMSTGNKAPSVLAADIVLATMRKGRR 392 >ref|YP_004108916.1| lipid-A-disaccharide synthase [Rhodopseudomonas palustris DX-1] gb|ADU44183.1| lipid-A-disaccharide synthase [Rhodopseudomonas palustris DX-1] Length = 397 Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust. Identities = 274/385 (71%), Positives = 318/385 (82%), Gaps = 1/385 (0%) Query: 9 VRKIFLIATEESGDRLGAALMQVLRQRLGDAVQFSGVGGQAMAAQGIASLFPIEELSIMG 68 VR ++LIATEESGDRLG ALM+ LR R G V+F+G+GG MA +G+ SLFPIEELSI+G Sbjct: 11 VRTVYLIATEESGDRLGGALMRELRARFGARVRFAGIGGHTMAGEGLVSLFPIEELSIIG 70 Query: 69 FAAVVKQLPKILRLIRRTADAVLADAPDMLVIIDSPDFTHRVARRVRARNPNIPIVDYVS 128 FAAVV++LP IL+LIRR ADAVLA PD+LVIIDSPDFTHRVARRVR R+P IPIVDYVS Sbjct: 71 FAAVVQRLPLILKLIRRAADAVLAAKPDILVIIDSPDFTHRVARRVRLRDPAIPIVDYVS 130 Query: 129 PSVWAWRPGRARAMQRYVDHVLALLPFEPEEYRKLQGPPCSYVGHPLTEQLASLRPNEDE 188 P+VWAWRPGRARAM YVDHV+ALLPFEP EYR+LQGPPCSYVGHPLTEQ SLRP++ E Sbjct: 131 PTVWAWRPGRARAMLGYVDHVMALLPFEPAEYRRLQGPPCSYVGHPLTEQFGSLRPSQTE 190 Query: 189 QKRRDAQPPVLLVLPGSRRSEIRHHLALFGTALGQLSKQ-TPFELVLPTMPHLEAMVREG 247 Q RRDAQPPVLLVLPGSRRSE+RHH A FG +L +L + FE VLPT PHLEA+VR Sbjct: 191 QARRDAQPPVLLVLPGSRRSEVRHHAAAFGDSLAKLRRDGVAFEAVLPTTPHLEALVRAA 250 Query: 248 VASWPVVPRLAIGETEKRAAFRVARAALAKSGTVTLELALSGIPMVTAYRVGAAEAFILR 307 VASW V PR+ +GE EKRAAFR+A AALAKSGTVTLELA++G+PMVTAYR G+ E +I R Sbjct: 251 VASWEVQPRIVVGEQEKRAAFRIAHAALAKSGTVTLELAIAGVPMVTAYRAGSLEIWIAR 310 Query: 308 RAIRVSSVILANLVIGSDIIPEFLQEDCTPDKLAAALRDVLADSPDRLRQLVGFATMDGK 367 R +R +VILANLVIG D++PEF+QEDC D+LA A+RD+L D+P R RQL GFA +D Sbjct: 311 RVVRPGTVILANLVIGDDVVPEFIQEDCVADRLAPAVRDLLGDTPARRRQLAGFARIDAI 370 Query: 368 MSTGDQPPSVRAADIVLAEMGRRST 392 +STGDQ PS RAADIV M RR + Sbjct: 371 LSTGDQTPSGRAADIVADVMQRRRS 395 >ref|YP_001992232.1| lipid-A-disaccharide synthase [Rhodopseudomonas palustris TIE-1] gb|ACF01757.1| lipid-A-disaccharide synthase [Rhodopseudomonas palustris TIE-1] Length = 393 Score = 555 bits (1429), Expect = e-156, Method: Compositional matrix adjust. Identities = 272/379 (71%), Positives = 314/379 (82%), Gaps = 1/379 (0%) Query: 10 RKIFLIATEESGDRLGAALMQVLRQRLGDAVQFSGVGGQAMAAQGIASLFPIEELSIMGF 69 R ++LIATEESGDRLGAALM+ LR RLG V+F+GVGG MA +G+ASLFPIEELSI+GF Sbjct: 12 RTVYLIATEESGDRLGAALMRELRARLGSKVRFAGVGGHCMAGEGLASLFPIEELSIIGF 71 Query: 70 AAVVKQLPKILRLIRRTADAVLADAPDMLVIIDSPDFTHRVARRVRARNPNIPIVDYVSP 129 AAVV++LP IL+LIRR DAVL PD+LVIIDSPDFTHRVARRVR R+P+IPIVDYVSP Sbjct: 72 AAVVQRLPMILKLIRRAVDAVLTAKPDILVIIDSPDFTHRVARRVRQRDPSIPIVDYVSP 131 Query: 130 SVWAWRPGRARAMQRYVDHVLALLPFEPEEYRKLQGPPCSYVGHPLTEQLASLRPNEDEQ 189 +VWAWRPGRARAM YVDHVLALLPFEP EYR+LQGPPCSYVGHPLTEQL SLRP+ EQ Sbjct: 132 TVWAWRPGRARAMLGYVDHVLALLPFEPAEYRRLQGPPCSYVGHPLTEQLGSLRPDAAEQ 191 Query: 190 KRRDAQPPVLLVLPGSRRSEIRHHLALFGTALGQLSKQ-TPFELVLPTMPHLEAMVREGV 248 RR+A PPVLLVLPGSRRSE+RHH A FG L +L + FE VLPT PHLE +VR V Sbjct: 192 ARREASPPVLLVLPGSRRSEVRHHAAAFGNTLARLKHEGVAFEAVLPTTPHLEGLVRAAV 251 Query: 249 ASWPVVPRLAIGETEKRAAFRVARAALAKSGTVTLELALSGIPMVTAYRVGAAEAFILRR 308 ASW V PR+ +GE +KRAAFR+A AALAKSGTVTLELA++G+PMVTAYR G+ E +I RR Sbjct: 252 ASWEVQPRIVVGEQDKRAAFRIAHAALAKSGTVTLELAIAGVPMVTAYRAGSVEIWIARR 311 Query: 309 AIRVSSVILANLVIGSDIIPEFLQEDCTPDKLAAALRDVLADSPDRLRQLVGFATMDGKM 368 +R +VILANLV+G D+IPEF+QEDC PDKL A+RD+L D+P R RQL GFA +D + Sbjct: 312 VVRPGTVILANLVMGDDVIPEFIQEDCVPDKLVPAVRDLLGDTPARRRQLAGFAKIDDIL 371 Query: 369 STGDQPPSVRAADIVLAEM 387 STG+Q PS RAADIVL M Sbjct: 372 STGEQTPSGRAADIVLDVM 390 >ref|NP_948250.1| lipid-A-disaccharide synthase [Rhodopseudomonas palustris CGA009] sp|Q6N5R2.1|LPXB_RHOPA RecName: Full=Lipid-A-disaccharide synthase emb|CAE28350.1| lipid-A-disaccharide synthase [Rhodopseudomonas palustris CGA009] Length = 393 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 271/380 (71%), Positives = 314/380 (82%), Gaps = 1/380 (0%) Query: 9 VRKIFLIATEESGDRLGAALMQVLRQRLGDAVQFSGVGGQAMAAQGIASLFPIEELSIMG 68 VR ++LIATEESGDRLGAALM+ LR RLG V+F+GVGG MA +G+ASLFPIEELSI+G Sbjct: 11 VRTVYLIATEESGDRLGAALMRELRARLGSKVRFAGVGGHCMAGEGLASLFPIEELSIIG 70 Query: 69 FAAVVKQLPKILRLIRRTADAVLADAPDMLVIIDSPDFTHRVARRVRARNPNIPIVDYVS 128 FAAVV++LP IL+LIRR DAVL PD+LVIIDSPDFTHRVARRVR R+P+IPIVDYVS Sbjct: 71 FAAVVQRLPMILKLIRRAVDAVLTAKPDILVIIDSPDFTHRVARRVRQRDPSIPIVDYVS 130 Query: 129 PSVWAWRPGRARAMQRYVDHVLALLPFEPEEYRKLQGPPCSYVGHPLTEQLASLRPNEDE 188 P+VWAWRPGRARAM YVDHVLALLPFEP EYR+LQGPPCSYVGHPLTEQ SLRP+ E Sbjct: 131 PTVWAWRPGRARAMLGYVDHVLALLPFEPAEYRRLQGPPCSYVGHPLTEQFGSLRPDAAE 190 Query: 189 QKRRDAQPPVLLVLPGSRRSEIRHHLALFGTALGQLSKQ-TPFELVLPTMPHLEAMVREG 247 Q RR+A PPVLLVLPGSRRSE+RHH A FG L +L + FE VLPT PHLE +VR Sbjct: 191 QARREASPPVLLVLPGSRRSEVRHHAAAFGDTLARLKHEGVAFEAVLPTTPHLEGLVRAA 250 Query: 248 VASWPVVPRLAIGETEKRAAFRVARAALAKSGTVTLELALSGIPMVTAYRVGAAEAFILR 307 VASW V PR+ +GE +KRAAFR+A AALAKSGTVTLELA++G+PMVTAYR G+ E +I R Sbjct: 251 VASWEVQPRIVVGEQDKRAAFRIAHAALAKSGTVTLELAIAGVPMVTAYRAGSVEIWIAR 310 Query: 308 RAIRVSSVILANLVIGSDIIPEFLQEDCTPDKLAAALRDVLADSPDRLRQLVGFATMDGK 367 R +R +VILANLV+G D+IPEF+QEDC PDKL A+RD+L ++P R RQL GFA +D Sbjct: 311 RVVRPGTVILANLVMGDDVIPEFIQEDCVPDKLVPAVRDLLGNTPARRRQLAGFAKIDDI 370 Query: 368 MSTGDQPPSVRAADIVLAEM 387 +STG+Q PS RAADIVL M Sbjct: 371 LSTGEQTPSGRAADIVLDVM 390 >ref|YP_781484.1| lipid-A-disaccharide synthase [Rhodopseudomonas palustris BisA53] gb|ABJ06504.1| lipid-A-disaccharide synthase [Rhodopseudomonas palustris BisA53] Length = 391 Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust. Identities = 278/377 (73%), Positives = 320/377 (84%), Gaps = 1/377 (0%) Query: 12 IFLIATEESGDRLGAALMQVLRQRLGDAVQFSGVGGQAMAAQGIASLFPIEELSIMGFAA 71 IFLIATEESGDRLGA LMQ LRQRLG AV+F GVGG AMA +G+ SLFPIE+LSI+G AA Sbjct: 9 IFLIATEESGDRLGAHLMQALRQRLGGAVRFEGVGGTAMAREGLQSLFPIEQLSIIGLAA 68 Query: 72 VVKQLPKILRLIRRTADAVLADAPDMLVIIDSPDFTHRVARRVRARNPNIPIVDYVSPSV 131 VV++LP ILRLIR AVL +PD+LVIIDSPDFTHRVA+RVRAR+P+IPIVDYV+P+V Sbjct: 69 VVQRLPLILRLIREATKAVLEASPDVLVIIDSPDFTHRVAKRVRARDPSIPIVDYVAPTV 128 Query: 132 WAWRPGRARAMQRYVDHVLALLPFEPEEYRKLQGPPCSYVGHPLTEQLASLRPNEDEQKR 191 WAWRPGRARAM RYVDHVLALLPFEP E+R+L GPPCSYVGHPLTEQ +L PNE+E+ R Sbjct: 129 WAWRPGRARAMLRYVDHVLALLPFEPAEFRRLHGPPCSYVGHPLTEQTDTLHPNEEERAR 188 Query: 192 RDAQPPVLLVLPGSRRSEIRHHLALFGTALGQLSKQ-TPFELVLPTMPHLEAMVREGVAS 250 RDA+PP LLVLPGSRRSEIRHH+A+FG ALG L +Q FELVLPT PHLEAMVR GVA+ Sbjct: 189 RDAEPPTLLVLPGSRRSEIRHHIAVFGEALGLLRQQGLAFELVLPTTPHLEAMVRAGVAT 248 Query: 251 WPVVPRLAIGETEKRAAFRVARAALAKSGTVTLELALSGIPMVTAYRVGAAEAFILRRAI 310 WPV PR+ +G+ +KRAAFR+ARAALAKSGTVTLELA++G+PMVTAYR G AEA+I RR + Sbjct: 249 WPVTPRIVVGDVDKRAAFRIARAALAKSGTVTLELAIAGVPMVTAYRAGTAEAWIGRRVV 308 Query: 311 RVSSVILANLVIGSDIIPEFLQEDCTPDKLAAALRDVLADSPDRLRQLVGFATMDGKMST 370 R +VILANLVIG D++PEF+QE CT LAAALR+VLAD+P R RQ GFA +D MST Sbjct: 309 RPGTVILANLVIGEDVVPEFIQEACTAPTLAAALREVLADTPARRRQRDGFARIDAIMST 368 Query: 371 GDQPPSVRAADIVLAEM 387 G PS RAADIVLA + Sbjct: 369 GGHSPSERAADIVLASL 385