BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0096.0001.p (268 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771495.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase... 480 e-133 ref|YP_576976.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase... 473 e-131 ref|YP_486435.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase... 470 e-131 ref|ZP_01047953.1| 1-deoxy-D-xylulose 5-phosphate reductoisomera... 468 e-130 ref|YP_001206111.1| 1-deoxy-D-xylulose 5-phosphate reductoisomer... 464 e-129 >ref|NP_771495.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Bradyrhizobium japonicum USDA 110] sp|Q89KP9.1|DXR_BRAJA RecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase dbj|BAC50120.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Bradyrhizobium japonicum USDA 110] Length = 407 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 237/268 (88%), Positives = 251/268 (93%) Query: 1 LVCAGDIFMERAKKAGACILPADSEHNALFQALASGNREELTRVIITASGGPFXTGAPAD 60 LVCAGD FM+RA KAGACILPADSEHNALFQAL SGNR+EL RVIITASGGPF T PAD Sbjct: 140 LVCAGDFFMQRAAKAGACILPADSEHNALFQALGSGNRDELVRVIITASGGPFRTWKPAD 199 Query: 61 IEQATLEQALKHPNWSMGQKITIDSASMMNKGLEVIEASYLFALTPDEIDVLVHPQSIIH 120 IEQATL QALKHPNWSMGQKITIDSASMMNKGLEVIEASYLFAL+PDEIDVLVHPQSIIH Sbjct: 200 IEQATLAQALKHPNWSMGQKITIDSASMMNKGLEVIEASYLFALSPDEIDVLVHPQSIIH 259 Query: 121 GMVEFSDRSVVAQLGTPDMRIPIAHCLGWPDRVVGPSAKLDLAKIGQLTFETPDFERFPG 180 GMVEFSDRSVVAQLG+PDMR PIAHCLGWPDR+ GP+AKLDLAKIGQLTFE PDFERFPG Sbjct: 260 GMVEFSDRSVVAQLGSPDMRTPIAHCLGWPDRIKGPAAKLDLAKIGQLTFEAPDFERFPG 319 Query: 181 LRLAYEALRMGHGATTVYNAANEIAVAAFIAGKIKFGAIARLVEATMNDWIRSGNQPPLR 240 LRLAY++LR G GATTVYNAANE+AVAAFIAGKI+FGAIARLVEAT+ DWIR GNQ PL Sbjct: 320 LRLAYDSLRTGKGATTVYNAANEVAVAAFIAGKIRFGAIARLVEATLEDWIRGGNQTPLT 379 Query: 241 SADDAISVDHIARNKAAALLPQIALKAT 268 SADDAISVDH+ARN+AAALLPQIALKA+ Sbjct: 380 SADDAISVDHVARNRAAALLPQIALKAS 407 >ref|YP_576976.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Nitrobacter hamburgensis X14] sp|Q1QMN1.1|DXR_NITHX RecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase gb|ABE62516.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Nitrobacter hamburgensis X14] Length = 407 Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust. Identities = 227/268 (84%), Positives = 245/268 (91%) Query: 1 LVCAGDIFMERAKKAGACILPADSEHNALFQALASGNREELTRVIITASGGPFXTGAPAD 60 LVCAGD FM+RA KAGACILPADSEHNALFQAL+SGNR+ELTRVIITASGGPF T A AD Sbjct: 140 LVCAGDFFMQRAAKAGACILPADSEHNALFQALSSGNRDELTRVIITASGGPFRTWAAAD 199 Query: 61 IEQATLEQALKHPNWSMGQKITIDSASMMNKGLEVIEASYLFALTPDEIDVLVHPQSIIH 120 IE+ATL QALKHPNWSMG+KITIDSASMMNKGLEVIEA+ LF LTPDEIDVLVHPQSI+H Sbjct: 200 IEKATLAQALKHPNWSMGRKITIDSASMMNKGLEVIEAACLFTLTPDEIDVLVHPQSIVH 259 Query: 121 GMVEFSDRSVVAQLGTPDMRIPIAHCLGWPDRVVGPSAKLDLAKIGQLTFETPDFERFPG 180 GMVEFSDRSVVAQLGTPDMR PIAHCLGWP+R+VGP+AKLDLA IGQLTFE PDF RFP Sbjct: 260 GMVEFSDRSVVAQLGTPDMRTPIAHCLGWPERIVGPAAKLDLASIGQLTFEAPDFTRFPA 319 Query: 181 LRLAYEALRMGHGATTVYNAANEIAVAAFIAGKIKFGAIARLVEATMNDWIRSGNQPPLR 240 LRLAY+ALR G+GATTVYNAANEIAVAAFI KI+FGAIARLVEATMN W+R+GN PL Sbjct: 320 LRLAYDALRTGNGATTVYNAANEIAVAAFIGEKIRFGAIARLVEATMNGWVRAGNLAPLA 379 Query: 241 SADDAISVDHIARNKAAALLPQIALKAT 268 SADDAI++DH ARN AA+LLPQIA KAT Sbjct: 380 SADDAIAIDHNARNMAASLLPQIAAKAT 407 >ref|YP_486435.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Rhodopseudomonas palustris HaA2] sp|Q2IW86.1|DXR_RHOP2 RecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase gb|ABD07524.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Rhodopseudomonas palustris HaA2] Length = 407 Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust. Identities = 228/268 (85%), Positives = 243/268 (90%) Query: 1 LVCAGDIFMERAKKAGACILPADSEHNALFQALASGNREELTRVIITASGGPFXTGAPAD 60 LVCAGD FM RA AG+CILPADSEHNALFQALASGNR ELTRVIITASGGPF T + AD Sbjct: 140 LVCAGDFFMSRAVAAGSCILPADSEHNALFQALASGNRHELTRVIITASGGPFRTWSAAD 199 Query: 61 IEQATLEQALKHPNWSMGQKITIDSASMMNKGLEVIEASYLFALTPDEIDVLVHPQSIIH 120 IEQATL QALKHPNWSMGQKITIDSASMMNKGLEVIEASYLFAL+PDEIDVLVHPQSI+H Sbjct: 200 IEQATLAQALKHPNWSMGQKITIDSASMMNKGLEVIEASYLFALSPDEIDVLVHPQSIVH 259 Query: 121 GMVEFSDRSVVAQLGTPDMRIPIAHCLGWPDRVVGPSAKLDLAKIGQLTFETPDFERFPG 180 GMVEF+D SVVAQLG PDMRIPIAHCLGWPDR+VG +A+LDLAKIGQLTFE PDFERFPG Sbjct: 260 GMVEFADHSVVAQLGAPDMRIPIAHCLGWPDRIVGRAARLDLAKIGQLTFEAPDFERFPG 319 Query: 181 LRLAYEALRMGHGATTVYNAANEIAVAAFIAGKIKFGAIARLVEATMNDWIRSGNQPPLR 240 LRLAY+ALR G+GATTVYNAANEIAVAAFIA KI+FGAIARLVE T+N WIR+GN PL Sbjct: 320 LRLAYDALRAGNGATTVYNAANEIAVAAFIAQKIRFGAIARLVEDTLNAWIRAGNLAPLG 379 Query: 241 SADDAISVDHIARNKAAALLPQIALKAT 268 SADDAI+VDH AR AA LLPQIA KA+ Sbjct: 380 SADDAIAVDHNARKMAATLLPQIAAKAS 407 >ref|ZP_01047953.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Nitrobacter sp. Nb-311A] gb|EAQ34087.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Nitrobacter sp. Nb-311A] Length = 407 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 226/268 (84%), Positives = 243/268 (90%) Query: 1 LVCAGDIFMERAKKAGACILPADSEHNALFQALASGNREELTRVIITASGGPFXTGAPAD 60 LVCAGD FM+RA KAGACILPADSEHNALFQAL+SGNR+ELTRVIITASGGPF T A AD Sbjct: 140 LVCAGDFFMQRAAKAGACILPADSEHNALFQALSSGNRDELTRVIITASGGPFRTWAAAD 199 Query: 61 IEQATLEQALKHPNWSMGQKITIDSASMMNKGLEVIEASYLFALTPDEIDVLVHPQSIIH 120 IE ATL QALKHPNWSMG+KITIDSASMMNKGLEVIEA+ LFAL P+EIDVLVHPQSIIH Sbjct: 200 IENATLAQALKHPNWSMGRKITIDSASMMNKGLEVIEAACLFALEPEEIDVLVHPQSIIH 259 Query: 121 GMVEFSDRSVVAQLGTPDMRIPIAHCLGWPDRVVGPSAKLDLAKIGQLTFETPDFERFPG 180 GMVEFSDRSVVAQLGTPDMR PIAHCLGWP+R+ GP+ KLDLA IGQLTFE PDF RFP Sbjct: 260 GMVEFSDRSVVAQLGTPDMRTPIAHCLGWPERIAGPAVKLDLASIGQLTFEAPDFARFPA 319 Query: 181 LRLAYEALRMGHGATTVYNAANEIAVAAFIAGKIKFGAIARLVEATMNDWIRSGNQPPLR 240 LRLAY+ALR G+GATTVYNAANEIAVAAFIA KI+FGAIARLVEATMNDW+R+GN PL Sbjct: 320 LRLAYDALRTGNGATTVYNAANEIAVAAFIAEKIRFGAIARLVEATMNDWVRAGNLAPLS 379 Query: 241 SADDAISVDHIARNKAAALLPQIALKAT 268 SADDAI+VDH ARN AA+LLPQIA A+ Sbjct: 380 SADDAIAVDHNARNMAASLLPQIAAMAS 407 >ref|YP_001206111.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Bradyrhizobium sp. ORS 278] sp|A4YVG0.1|DXR_BRASO RecName: Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Short=DXP reductoisomerase; AltName: Full=1-deoxyxylulose-5-phosphate reductoisomerase; AltName: Full=2-C-methyl-D-erythritol 4-phosphate synthase emb|CAL77886.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) [Bradyrhizobium sp. ORS 278] Length = 407 Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust. Identities = 229/268 (85%), Positives = 247/268 (92%) Query: 1 LVCAGDIFMERAKKAGACILPADSEHNALFQALASGNREELTRVIITASGGPFXTGAPAD 60 LVCAGD FM+RA +AGACILPADSEHNALFQAL+SGNREEL RVIITASGGPF T AP D Sbjct: 140 LVCAGDFFMQRAAQAGACILPADSEHNALFQALSSGNREELVRVIITASGGPFRTWAPQD 199 Query: 61 IEQATLEQALKHPNWSMGQKITIDSASMMNKGLEVIEASYLFALTPDEIDVLVHPQSIIH 120 IEQATLEQALKHPNWSMGQKITIDSASMMNKGLEVIEASYLFAL+PDEIDVLVHPQSI+H Sbjct: 200 IEQATLEQALKHPNWSMGQKITIDSASMMNKGLEVIEASYLFALSPDEIDVLVHPQSIVH 259 Query: 121 GMVEFSDRSVVAQLGTPDMRIPIAHCLGWPDRVVGPSAKLDLAKIGQLTFETPDFERFPG 180 GMVEFSDRSVVAQLG PDMRIPIAHCLGWP+R+ GPSA+LDLAKIG LTFE PDFERFPG Sbjct: 260 GMVEFSDRSVVAQLGAPDMRIPIAHCLGWPERIKGPSARLDLAKIGTLTFEAPDFERFPG 319 Query: 181 LRLAYEALRMGHGATTVYNAANEIAVAAFIAGKIKFGAIARLVEATMNDWIRSGNQPPLR 240 LRLAY++LR G GATTV+NAANE+AVAAFI G I+FGAIARLVEAT+NDW RSGNQ PL Sbjct: 320 LRLAYDSLRAGRGATTVFNAANEVAVAAFIGGHIRFGAIARLVEATLNDWTRSGNQAPLS 379 Query: 241 SADDAISVDHIARNKAAALLPQIALKAT 268 SADDAI++DH AR +AA LLPQIA KA+ Sbjct: 380 SADDAIAIDHDARKRAAGLLPQIAAKAS 407