BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0095.0054.p         (167 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_769086.1| hypothetical protein bll2446 [Bradyrhizobium ja...   291   3e-77
ref|YP_001204032.1| hypothetical protein BRADO1931 [Bradyrhizobi...   258   3e-67
ref|YP_576399.1| hypothetical protein Nham_1091 [Nitrobacter ham...   245   2e-63
ref|YP_319591.1| hypothetical protein Nwi_2989 [Nitrobacter wino...   240   7e-62
ref|ZP_01046289.1| hypothetical protein NB311A_05398 [Nitrobacte...   236   1e-60

>ref|NP_769086.1| hypothetical protein bll2446 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47711.1| bll2446 [Bradyrhizobium japonicum USDA 110]
          Length = 167

 Score =  291 bits (744), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 136/166 (81%), Positives = 151/166 (90%)

Query: 1   MSFHDAVVPAYLQILNSLTGELTKAEAHCEAKKIAPEVLLGSRLYPDMLPLTKQVQLVCD 60
           MSF+DAVVPAYLQ+LNSLTG LTKAEAHC AKK+ P VLLGSRL+PDMLPL+KQ+QLV D
Sbjct: 1   MSFYDAVVPAYLQMLNSLTGLLTKAEAHCAAKKVDPSVLLGSRLFPDMLPLSKQIQLVSD 60

Query: 61  HAARGCARLTHSEVPSTPDTEKSFGELKQRLAKTIDYVKSFKPAQFDGADARDVTFPIGP 120
            AA+GCARLTHSEVPSTPDTEK+F ELKQRLAKTIDYVKSFKPAQF+GAD +DVTFP GP
Sbjct: 61  FAAKGCARLTHSEVPSTPDTEKTFEELKQRLAKTIDYVKSFKPAQFEGADTKDVTFPAGP 120

Query: 121 DRTMTLKGQQFLSAFSFPNFYFHAVTAHDILRHNGVEIGKRXLQGS 166
           D+++T+KGQQFLSAFS PNFYFHA TAH ILRHNGVEIGKR   G+
Sbjct: 121 DKSITMKGQQFLSAFSLPNFYFHATTAHGILRHNGVEIGKRDFLGA 166


>ref|YP_001204032.1| hypothetical protein BRADO1931 [Bradyrhizobium sp. ORS 278]
 emb|CAL75795.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 160

 Score =  258 bits (658), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 119/158 (75%), Positives = 137/158 (86%)

Query: 8   VPAYLQILNSLTGELTKAEAHCEAKKIAPEVLLGSRLYPDMLPLTKQVQLVCDHAARGCA 67
           +PAYLQ+L SL+G L+KAEA+CEAKKIAPEVLLG+RLYPDMLPL++QVQL CD AA+GCA
Sbjct: 1   MPAYLQMLGSLSGLLSKAEAYCEAKKIAPEVLLGARLYPDMLPLSRQVQLACDFAAKGCA 60

Query: 68  RLTHSEVPSTPDTEKSFGELKQRLAKTIDYVKSFKPAQFDGADARDVTFPIGPDRTMTLK 127
           RLTHSEVPSTPDTE SF EL+QRL KT DY+K+F PAQF+GAD RDVTFP GP+ ++TLK
Sbjct: 61  RLTHSEVPSTPDTETSFAELRQRLTKTADYLKTFTPAQFEGADGRDVTFPSGPNTSVTLK 120

Query: 128 GQQFLSAFSFPNFYFHAVTAHDILRHNGVEIGKRXLQG 165
           GQ F++  SFPNFYFHA  AH ILRHNGVEIGKR   G
Sbjct: 121 GQDFVNRISFPNFYFHAAIAHGILRHNGVEIGKRDFLG 158


>ref|YP_576399.1| hypothetical protein Nham_1091 [Nitrobacter hamburgensis X14]
 gb|ABE61939.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 196

 Score =  245 bits (626), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 113/165 (68%), Positives = 136/165 (82%)

Query: 1   MSFHDAVVPAYLQILNSLTGELTKAEAHCEAKKIAPEVLLGSRLYPDMLPLTKQVQLVCD 60
           MSF+D+  PA+LQ L +L+  L+KAEAH  A+KIAPE LL +RLYPDMLPLT+Q+Q+ CD
Sbjct: 30  MSFYDSAAPAFLQTLGALSDILSKAEAHAVARKIAPETLLTARLYPDMLPLTRQIQIACD 89

Query: 61  HAARGCARLTHSEVPSTPDTEKSFGELKQRLAKTIDYVKSFKPAQFDGADARDVTFPIGP 120
            A + CARL+ SEVPSTPDTEK+F EL+QRLAK  DYVK   PA+F+GA+ RDVTFP GP
Sbjct: 90  FAVKTCARLSGSEVPSTPDTEKTFDELQQRLAKATDYVKDAAPAKFEGAENRDVTFPAGP 149

Query: 121 DRTMTLKGQQFLSAFSFPNFYFHAVTAHDILRHNGVEIGKRXLQG 165
           D+TMTLKGQQ+LS F+ PNFYFHA TA+DILRHNG+EIGKR   G
Sbjct: 150 DKTMTLKGQQYLSHFALPNFYFHATTAYDILRHNGLEIGKRDFMG 194


>ref|YP_319591.1| hypothetical protein Nwi_2989 [Nitrobacter winogradskyi Nb-255]
 gb|ABA06239.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
          Length = 167

 Score =  240 bits (612), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 109/165 (66%), Positives = 134/165 (81%)

Query: 1   MSFHDAVVPAYLQILNSLTGELTKAEAHCEAKKIAPEVLLGSRLYPDMLPLTKQVQLVCD 60
           MSFHD+  PA+LQ+L +L+  L KAEAH  A+KIAPE LL +RLYPDMLPLT+Q+Q+ CD
Sbjct: 1   MSFHDSASPAFLQMLGALSDILRKAEAHASARKIAPETLLTARLYPDMLPLTRQIQIACD 60

Query: 61  HAARGCARLTHSEVPSTPDTEKSFGELKQRLAKTIDYVKSFKPAQFDGADARDVTFPIGP 120
            A + CARL+ SEVPSTPDTEK+F EL+QR+AK  DYV+   P +FDGA+ R++TFP G 
Sbjct: 61  FAVKTCARLSGSEVPSTPDTEKTFDELQQRIAKATDYVRKLPPDKFDGAEDREITFPAGR 120

Query: 121 DRTMTLKGQQFLSAFSFPNFYFHAVTAHDILRHNGVEIGKRXLQG 165
           D+TMTLKGQQ+LS F+ PNFYFHA TA+DILRHNGVE+GKR   G
Sbjct: 121 DQTMTLKGQQYLSHFALPNFYFHATTAYDILRHNGVELGKRDFMG 165


>ref|ZP_01046289.1| hypothetical protein NB311A_05398 [Nitrobacter sp. Nb-311A]
 gb|EAQ35826.1| hypothetical protein NB311A_05398 [Nitrobacter sp. Nb-311A]
          Length = 167

 Score =  236 bits (601), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 108/165 (65%), Positives = 134/165 (81%)

Query: 1   MSFHDAVVPAYLQILNSLTGELTKAEAHCEAKKIAPEVLLGSRLYPDMLPLTKQVQLVCD 60
           MSF+D+  PA+LQ L +L+  L KAEAH  A+KIAPE LL +RLYPDMLPLT+Q+Q+ CD
Sbjct: 1   MSFYDSAPPAFLQTLGALSDILRKAEAHASARKIAPETLLTARLYPDMLPLTRQIQIACD 60

Query: 61  HAARGCARLTHSEVPSTPDTEKSFGELKQRLAKTIDYVKSFKPAQFDGADARDVTFPIGP 120
            A + CARLT SE+PSTPDTEK+F EL+QR+AK  +YV++  P +F+GA+ RDVTFP G 
Sbjct: 61  FAVKTCARLTGSEIPSTPDTEKTFDELQQRIAKATEYVRNAAPDKFEGAEHRDVTFPAGR 120

Query: 121 DRTMTLKGQQFLSAFSFPNFYFHAVTAHDILRHNGVEIGKRXLQG 165
           D+TMTLKGQQ+LS F+ PNFYFHA TA+DILRHNGVE+GKR   G
Sbjct: 121 DQTMTLKGQQYLSHFALPNFYFHATTAYDILRHNGVELGKRDFMG 165