BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0095.0053.p (361 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771300.1| ABC transporter [Bradyrhizobium japonicum USDA ... 437 e-120 ref|YP_001203691.1| putative ABC transporter-like [Bradyrhizobiu... 341 1e-91 ref|YP_001242295.1| putative ABC transporter-like protein [Brady... 334 1e-89 ref|YP_579123.1| ABC transporter related [Nitrobacter hamburgens... 310 3e-82 ref|YP_001202450.1| putative ABC transporter ATP binding protein... 304 2e-80 >ref|NP_771300.1| ABC transporter [Bradyrhizobium japonicum USDA 110] dbj|BAC49925.1| blr4660 [Bradyrhizobium japonicum USDA 110] Length = 379 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 230/357 (64%), Positives = 276/357 (77%), Gaps = 1/357 (0%) Query: 3 TRTRFAPEEKQLLLRFWQSASGYWRGSSGWLGWFLVVLLIANVILQLLTQYGLNFWNRDF 62 T +P E+QLLLRFW+SA G+W+G S W L VLL+A V+LQLLTQY LNFWNRDF Sbjct: 4 NETYHSPGERQLLLRFWKSARGFWKGKSAGWAWLLTVLLVATVLLQLLTQYSLNFWNRDF 63 Query: 63 FNAVEQKNQPELIHQALRFVPLAGASIALDVSSVWVRMTLQRSWRAWLSSRLYDYWLKDD 122 FNAVE+K+ EL+ QALRF+PLA AS++L V SVW RMTLQR WRAWLS LY YWL+ D Sbjct: 64 FNAVERKDGKELLSQALRFMPLAAASLSLAVFSVWGRMTLQRKWRAWLSDELYRYWLERD 123 Query: 123 RYKRLRFIPGDSEAPEYRIAEDAKVATDLPIDLAVGLLQSLLTIATFIGVLWSVGGGLTI 182 R+ RL F+ GD +APEYRIAED ++ATDLP+DL +GL+ SLLT ATFIG+L VGG LTI Sbjct: 124 RFVRLNFVAGDYQAPEYRIAEDCRLATDLPVDLVLGLVASLLTAATFIGILGVVGGNLTI 183 Query: 183 HVGGFALLVPGYLVVAVIAYSSLLATFIWLAAGRLTRVIEENKRMEAELRAIGTHLRESG 242 G L +PGYLVVAV+ YS +A L RLT V+EENKR EA+LRA+GTH+RESG Sbjct: 184 DAAGLTLTIPGYLVVAVVVYSIAVAAVTMLIGRRLTDVLEENKRAEAQLRAVGTHVRESG 243 Query: 243 EGKVTLAANTDGRHVIGAALKAVIHVWRIYCWQLMRMTLVTYTSLLITPVIGLLLCLPKY 302 E DG I ALKAVI W YCWQL+R+T++T+T+ L+TPVIG+LLC+PKY Sbjct: 244 ESMAPGMKGDDGIRAIHPALKAVIASWLNYCWQLVRLTIITHTNSLLTPVIGVLLCMPKY 303 Query: 303 LAGMMTLGEVVQASAAFVVVQTAFNWFTDNYAKLAEWAASANRVASLLLALDQ-DQP 358 +AG M LGEVVQA+AAFVVVQ+A +WFTDNY +LAEWAASANRVASLL ALD+ D+P Sbjct: 304 VAGTMLLGEVVQAAAAFVVVQSACSWFTDNYPRLAEWAASANRVASLLFALDKLDRP 360 >ref|YP_001203691.1| putative ABC transporter-like [Bradyrhizobium sp. ORS 278] emb|CAL75454.1| putative ABC transporter-like [Bradyrhizobium sp. ORS 278] Length = 392 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 168/342 (49%), Positives = 227/342 (66%), Gaps = 6/342 (1%) Query: 17 RFWQSASGYWRGSSGWLGWFLVVLLIANVILQLLTQYGLNFWNRDFFNAVEQKNQPELIH 76 RFW +A G+WRG+ W W L +L+ V LQL Q N W RDFFNA+E ++ L Sbjct: 33 RFWLTARGFWRGAKAWRVWLLCAVLVGIVALQLYVQLRFNTWTRDFFNALEGRDPARLRQ 92 Query: 77 QALRFVPLAGASIALDVSSVWVRMTLQRSWRAWLSSRLYDYWLKDDRYKRLRFIPGDSEA 136 QA+ VPL AS+ L ++SVW RMT+QR+WR WL++ + DYW+++DRY RL GD + Sbjct: 93 QAMLLVPLCAASVVLAIASVWGRMTIQRNWRQWLAAEVIDYWIENDRYARLATTKGDQKI 152 Query: 137 PEYRIAEDAKVATDLPIDLAVGLLQSLLTIATFIGVLWSVGGGLTIHVGGFALLVPGYLV 196 PEYRIAED ++ATD P+D AV ++ SLLT F+ VLW VGG ++ + G L +PGYLV Sbjct: 153 PEYRIAEDVRIATDAPVDFAVNVVSSLLTAVIFLQVLWQVGGPISFAISGLELWLPGYLV 212 Query: 197 VAVIAYSSLLATFIWLAAGRLTRVIEENKRMEAELRAIGTHLRESGEGKVTLAANTDGRH 256 ++V+AYS L+ + LT VI+ + E+EL LR+ GEG + D R Sbjct: 213 ISVVAYSGLVTGAMLWVGAPLTHVIQVKNQSESELITAAHRLRDIGEG---VTPKEDKRG 269 Query: 257 VIGA---ALKAVIHVWRIYCWQLMRMTLVTYTSLLITPVIGLLLCLPKYLAGMMTLGEVV 313 VI A AL VI WR CW+LMRMTLV++T+ L+ P+IGL+LC PK+L G MTLGE+ Sbjct: 270 VIAALWQALDRVIRQWRRLCWRLMRMTLVSHTNSLLAPIIGLVLCAPKFLDGQMTLGELT 329 Query: 314 QASAAFVVVQTAFNWFTDNYAKLAEWAASANRVASLLLALDQ 355 QA+AAF +VQ AFNW DNY+++A+W +S RV LLL+LD+ Sbjct: 330 QAAAAFTLVQGAFNWLVDNYSRVADWMSSLERVGGLLLSLDE 371 >ref|YP_001242295.1| putative ABC transporter-like protein [Bradyrhizobium sp. BTAi1] gb|ABQ38389.1| putative ABC transporter-like protein [Bradyrhizobium sp. BTAi1] Length = 374 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 164/342 (47%), Positives = 225/342 (65%), Gaps = 6/342 (1%) Query: 17 RFWQSASGYWRGSSGWLGWFLVVLLIANVILQLLTQYGLNFWNRDFFNAVEQKNQPELIH 76 RFW +A +W GS+ W W L LI V+LQL Q+ N+WNRDFF+A+E+++ L Sbjct: 15 RFWLTARQFWLGSAAWRVWLLCAALIVLVVLQLYVQFRFNYWNRDFFDALERRDPTRLRQ 74 Query: 77 QALRFVPLAGASIALDVSSVWVRMTLQRSWRAWLSSRLYDYWLKDDRYKRLRFIPGDSEA 136 QA+ +PL +S+ L + SVW RM +QR+WR WLS+++ DYW+++DRY RL + GD + Sbjct: 75 QAVLLIPLCLSSVVLAIVSVWGRMAMQRNWRQWLSAKVIDYWVENDRYARLATVRGDQKI 134 Query: 137 PEYRIAEDAKVATDLPIDLAVGLLQSLLTIATFIGVLWSVGGGLTIHVGGFALLVPGYLV 196 PEYRIAED ++ATD P+D AV ++ SLLT F+ VLW VGG + G L +PGYLV Sbjct: 135 PEYRIAEDIRIATDAPVDFAVSMISSLLTAVVFVQVLWQVGGSIGFAAAGLQLWIPGYLV 194 Query: 197 VAVIAYSSLLATFIWLAAGRLTRVIEENKRMEAELRAIGTHLRESGEGKVTLAANTDGRH 256 V+VI YS L+ + LTRVI+ + E+EL HLR+ GEG + + R Sbjct: 195 VSVIVYSVLVTGAMLWVGSPLTRVIQTKNQAESELITAAHHLRDIGEG---ITPKHEERG 251 Query: 257 VIGA---ALKAVIHVWRIYCWQLMRMTLVTYTSLLITPVIGLLLCLPKYLAGMMTLGEVV 313 VI AL I W+ CWQLMR TLV++ + LI P+IGL+LC PK+LA MTLGE+ Sbjct: 252 VIAGIWMALDRTIQQWKRLCWQLMRNTLVSHLNTLIAPIIGLVLCAPKFLADQMTLGELT 311 Query: 314 QASAAFVVVQTAFNWFTDNYAKLAEWAASANRVASLLLALDQ 355 QA+AAF +VQ +FNW DN++++AEW +S RV LLL+LD+ Sbjct: 312 QAAAAFTLVQGSFNWMVDNFSRVAEWTSSLERVGGLLLSLDR 353 >ref|YP_579123.1| ABC transporter related [Nitrobacter hamburgensis X14] gb|ABE64663.1| ABC transporter related protein [Nitrobacter hamburgensis X14] Length = 642 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 154/341 (45%), Positives = 212/341 (62%) Query: 14 LLLRFWQSASGYWRGSSGWLGWFLVVLLIANVILQLLTQYGLNFWNRDFFNAVEQKNQPE 73 LL RFW SA G+W + G L W + LIA +I + QY +N WNR F+A+E+++ Sbjct: 44 LLTRFWISAKGFWGANGGKLAWVFSLGLIALIITNVAFQYAINVWNRAIFDAIEKRDAAT 103 Query: 74 LIHQALRFVPLAGASIALDVSSVWVRMTLQRSWRAWLSSRLYDYWLKDDRYKRLRFIPGD 133 + + F PLA S+AL V V+ RM +QR WRAWL+ + WL + RY +L + GD Sbjct: 104 VFYLTGVFFPLASGSVALGVFQVFARMGIQRRWRAWLTDSVVSRWLTNGRYYQLNLVSGD 163 Query: 134 SEAPEYRIAEDAKVATDLPIDLAVGLLQSLLTIATFIGVLWSVGGGLTIHVGGFALLVPG 193 E PEYRIAED +VATD P+D A G++ + L+ ATFI VLW++GG LT+ VGG VPG Sbjct: 164 HENPEYRIAEDLRVATDAPVDFASGVISAFLSAATFIVVLWTIGGALTLTVGGSTFTVPG 223 Query: 194 YLVVAVIAYSSLLATFIWLAAGRLTRVIEENKRMEAELRAIGTHLRESGEGKVTLAANTD 253 +LVVA + Y+ + + + V E + EAE R T +RE+GE L + Sbjct: 224 FLVVAAVIYAGVTSGSMVYIGRHFVAVSESKNQAEAEYRYALTRVRENGESIALLGGEEE 283 Query: 254 GRHVIGAALKAVIHVWRIYCWQLMRMTLVTYTSLLITPVIGLLLCLPKYLAGMMTLGEVV 313 R I +VI W + C Q MR T+V+ S LI PVI LLLC PK+L G MTLG+V+ Sbjct: 284 ERDGINKTFASVIKQWALLCGQHMRTTIVSQGSSLIAPVIPLLLCAPKFLDGSMTLGQVM 343 Query: 314 QASAAFVVVQTAFNWFTDNYAKLAEWAASANRVASLLLALD 354 QA++AF +VQ+AF W DNY +LA+W A A R+ASL++++D Sbjct: 344 QAASAFTIVQSAFGWLVDNYPRLADWNACARRIASLMMSID 384 >ref|YP_001202450.1| putative ABC transporter ATP binding protein/permease [Bradyrhizobium sp. ORS 278] emb|CAL74200.1| putative ABC transporter (fused ATP-binding and permease components) [Bradyrhizobium sp. ORS 278] Length = 658 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 152/354 (42%), Positives = 216/354 (61%), Gaps = 6/354 (1%) Query: 7 FAPEEKQ------LLLRFWQSASGYWRGSSGWLGWFLVVLLIANVILQLLTQYGLNFWNR 60 +PEE + LL RFW SA GYW + L W + L+ ++ + QYG+N WNR Sbjct: 52 LSPEEAEQVRKRYLLTRFWISARGYWGRAGDRLAWPFTIGLLMLIVGTVAFQYGINVWNR 111 Query: 61 DFFNAVEQKNQPELIHQALRFVPLAGASIALDVSSVWVRMTLQRSWRAWLSSRLYDYWLK 120 F+A+E+++ + H F PLA S+ L V+ V+ RM +QR WRAWL++ + WL Sbjct: 112 SIFDAIEKRDAATVFHLTAIFFPLAIGSVILAVAQVYARMAIQRRWRAWLTNSVITRWLT 171 Query: 121 DDRYKRLRFIPGDSEAPEYRIAEDAKVATDLPIDLAVGLLQSLLTIATFIGVLWSVGGGL 180 RY +L + GD + PEYRIAED ++ATD P+D G+ +LL+ ATFI VLW++GG L Sbjct: 172 SGRYYQLNLVSGDHKNPEYRIAEDLRIATDSPVDFVAGVTSALLSAATFIVVLWTIGGAL 231 Query: 181 TIHVGGFALLVPGYLVVAVIAYSSLLATFIWLAAGRLTRVIEENKRMEAELRAIGTHLRE 240 T+ +GG L +PG+LV+A + Y+ + + I R + E+ + EA+ R T +RE Sbjct: 232 TLRLGGSELTIPGFLVIAAVVYAVIASGSIMAIGRRFVQTSEDKNQAEADFRYTLTRVRE 291 Query: 241 SGEGKVTLAANTDGRHVIGAALKAVIHVWRIYCWQLMRMTLVTYTSLLITPVIGLLLCLP 300 +GE L T+ R I V+ W Q MR TLV+ S LI PV+ LLLC P Sbjct: 292 NGESIALLGGETEERAGIDRTFGNVLQQWARLAGQHMRTTLVSQGSSLIAPVVPLLLCAP 351 Query: 301 KYLAGMMTLGEVVQASAAFVVVQTAFNWFTDNYAKLAEWAASANRVASLLLALD 354 K+L G MTLG+V+QA++AF +VQTAF W DNY +LA+W A A R+ASL+++LD Sbjct: 352 KFLDGSMTLGQVMQAASAFTIVQTAFGWLVDNYPRLADWNACARRIASLMMSLD 405