BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0095.0043.p         (69 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_487801.1| hypothetical protein RPB_4198 [Rhodopseudomonas...   125   2e-27
ref|YP_531261.1| hypothetical protein RPC_1380 [Rhodopseudomonas...   125   3e-27
ref|YP_571172.1| hypothetical protein RPD_4052 [Rhodopseudomonas...   125   3e-27
ref|YP_780328.1| hypothetical protein RPE_1396 [Rhodopseudomonas...   122   2e-26
ref|YP_001238339.1| hypothetical protein BBta_2255 [Bradyrhizobi...   121   3e-26

>ref|YP_487801.1| hypothetical protein RPB_4198 [Rhodopseudomonas palustris HaA2]
 gb|ABD08890.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 69

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/69 (86%), Positives = 65/69 (94%)

Query: 1  MSKGSNFWVIGGEFGSMNFHKLVEGSAQVRGPFKTRKEAEECWKEVSEESRHKAGVRFSI 60
          MS GSNFWVIGGEFGSMNFHKLVEGSAQV+GPFKTRKEAEE WK VSEE+RH+AGVRFSI
Sbjct: 1  MSNGSNFWVIGGEFGSMNFHKLVEGSAQVQGPFKTRKEAEEAWKVVSEENRHRAGVRFSI 60

Query: 61 VEEPSRVSA 69
          VEEP+R +A
Sbjct: 61 VEEPNRATA 69


>ref|YP_531261.1| hypothetical protein RPC_1380 [Rhodopseudomonas palustris BisB18]
 gb|ABD86942.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisB18]
          Length = 69

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/66 (90%), Positives = 64/66 (96%)

Query: 4  GSNFWVIGGEFGSMNFHKLVEGSAQVRGPFKTRKEAEECWKEVSEESRHKAGVRFSIVEE 63
          GSNFWVIGGEFGSMNFHKLVEGSAQV+GPFKTRKEAE+ W+EVSEE+RHKAGVRFSIVEE
Sbjct: 3  GSNFWVIGGEFGSMNFHKLVEGSAQVKGPFKTRKEAEDAWREVSEENRHKAGVRFSIVEE 62

Query: 64 PSRVSA 69
          PSRV A
Sbjct: 63 PSRVPA 68


>ref|YP_571172.1| hypothetical protein RPD_4052 [Rhodopseudomonas palustris BisB5]
 gb|ABE41271.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 69

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/69 (86%), Positives = 65/69 (94%)

Query: 1  MSKGSNFWVIGGEFGSMNFHKLVEGSAQVRGPFKTRKEAEECWKEVSEESRHKAGVRFSI 60
          MS GSNFWVIGGEFGSMNFHKLVEGSAQV+GPFKTRKEAEE WK VSEE+RH+AGVRFSI
Sbjct: 1  MSNGSNFWVIGGEFGSMNFHKLVEGSAQVQGPFKTRKEAEEAWKIVSEENRHRAGVRFSI 60

Query: 61 VEEPSRVSA 69
          VEEP+R +A
Sbjct: 61 VEEPNRATA 69


>ref|YP_780328.1| hypothetical protein RPE_1396 [Rhodopseudomonas palustris BisA53]
 gb|ABJ05348.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisA53]
          Length = 71

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/66 (87%), Positives = 63/66 (95%)

Query: 1  MSKGSNFWVIGGEFGSMNFHKLVEGSAQVRGPFKTRKEAEECWKEVSEESRHKAGVRFSI 60
          M+ GSNFWVIGGEFGSMNFHKLVEGSAQV+GPFKTRKEAEE WK VSEE+RH+AGVRFSI
Sbjct: 1  MTTGSNFWVIGGEFGSMNFHKLVEGSAQVKGPFKTRKEAEEAWKIVSEENRHRAGVRFSI 60

Query: 61 VEEPSR 66
          VEEP+R
Sbjct: 61 VEEPNR 66


>ref|YP_001238339.1| hypothetical protein BBta_2255 [Bradyrhizobium sp. BTAi1]
 gb|ABQ34433.1| hypothetical protein BBta_2255 [Bradyrhizobium sp. BTAi1]
          Length = 68

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/65 (87%), Positives = 62/65 (95%)

Query: 5  SNFWVIGGEFGSMNFHKLVEGSAQVRGPFKTRKEAEECWKEVSEESRHKAGVRFSIVEEP 64
          SNFWVIGGEFGSMNFHKLVEGSAQV+GPFK+RKEAE+CW+EVSEE+RHKAGVRFSIVEEP
Sbjct: 3  SNFWVIGGEFGSMNFHKLVEGSAQVKGPFKSRKEAEDCWREVSEENRHKAGVRFSIVEEP 62

Query: 65 SRVSA 69
           R  A
Sbjct: 63 QRAPA 67