BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0095.0041.p (226 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004513660.1| hypothetical protein Metme_2779 [Methylomona... 229 2e-58 ref|ZP_08825592.1| hypothetical protein ThidrDRAFT_4407 [Thiorho... 214 1e-53 emb|CBJ41168.1| conserved membrane protein of unknown function [... 212 4e-53 emb|CAQ18201.1| conserved hypothetical protein [Ralstonia solana... 209 2e-52 ref|YP_003748852.1| hypothetical protein RCFBP_mp30401 [Ralstoni... 207 1e-51 >ref|YP_004513660.1| hypothetical protein Metme_2779 [Methylomonas methanica MC09] gb|AEG01161.1| hypothetical protein Metme_2779 [Methylomonas methanica MC09] Length = 228 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 109/204 (53%), Positives = 146/204 (71%), Gaps = 7/204 (3%) Query: 7 SAFFGVLAAAAVVGSAVLFGKWQTLR---RAEYIRTFHWPAGLLARLEKRHPGFTRKDSA 63 + FF V+ ++ V+ +W+ LR RA +IR + +P GL +L +R+P + DS Sbjct: 4 TIFFIVMCLIILL---VVVRRWRYLRMEKRANFIRRYQFPPGLDEKLIRRYPLLSANDSD 60 Query: 64 LVSRGLRQFFLAYLMSGKRYVSMPSQAADDLWHEFILYTREYDAFCRRAFGGFLHHTPAV 123 L++R LRQFFLAYL G R+VSMPS+ ADD WHEFILYTR Y+ FCR+AFG F HHTPAV Sbjct: 61 LITRALRQFFLAYLQGGCRFVSMPSKLADDYWHEFILYTRHYEMFCRKAFGRFFHHTPAV 120 Query: 124 VLVKERRRSNEGLRRVWWYCCKYENIDPVRPTRLPLLFALDAKLNIANGFIYHTDCETLR 183 VL K R++N+GLRR+WW+CC+ E IDP +P+RLPLLFALD++ NI +GF+Y DC R Sbjct: 121 VLGKN-RQNNKGLRRIWWFCCREEGIDPKKPSRLPLLFALDSRFNIPDGFVYTADCRHFR 179 Query: 184 RSGIGGSSPYCGGDFSDSSIDGSS 207 + G ++ YCGGDFS + DGS+ Sbjct: 180 KMGSESATVYCGGDFSSTGFDGST 203 >ref|ZP_08825592.1| hypothetical protein ThidrDRAFT_4407 [Thiorhodococcus drewsii AZ1] gb|EGV27770.1| hypothetical protein ThidrDRAFT_4407 [Thiorhodococcus drewsii AZ1] Length = 224 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 114/203 (56%), Positives = 136/203 (66%), Gaps = 10/203 (4%) Query: 16 AAVVGSAVLF---GKWQTLRR---AEYIRTFHWPAGLLARLEKRHPGFTRKDSALVSRGL 69 A ++GS VLF W + RR A +IR++ +P GLL RL R+P + D LVSR L Sbjct: 5 AILIGSIVLFLLSKVWSSRRRKKRANFIRSYPFPNGLLDRLAARYPSLSTHDRHLVSRAL 64 Query: 70 RQFFLAYLMSGKRYVSMPSQAADDLWHEFILYTREYDAFCRRAFGGFLHHTPAVVLVKER 129 RQFFL YL SG+R+VSMPS+ DDLWHEFILYTR YDAFCRRAFG FLHHTPAVV+ + Sbjct: 65 RQFFLVYLASGRRFVSMPSRVTDDLWHEFILYTRHYDAFCRRAFGRFLHHTPAVVMGSD- 123 Query: 130 RRSNEGLRRVWWYCCKYENIDPVRPTRLPLLFALDAKLNIANGFIYHTDCETLRRSGIGG 189 R N GLRR WW+ C+ E +DP +P RLPLLFALDA+L I +GF Y DC R GI Sbjct: 124 RLGNAGLRRAWWFACREERLDPKKPARLPLLFALDAQLGIEDGFRYALDCHPQR--GIVE 181 Query: 190 SSP-YCGGDFSDSSIDGSSAGFG 211 P +C D + DGSS G G Sbjct: 182 DEPVHCIADLASGGFDGSSDGCG 204 >emb|CBJ41168.1| conserved membrane protein of unknown function [Ralstonia solanacearum CMR15] Length = 227 Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 105/187 (56%), Positives = 123/187 (65%), Gaps = 3/187 (1%) Query: 25 FGKWQTLRRAEYIRTFHWPAGLLARLEKRHPGFTRKDSALVSRGLRQFFLAYLMSGKRYV 84 +G WQ +R +IRT+ WP GLL R +HPG + S V + LRQFFL +L S YV Sbjct: 21 WGTWQRTQRETFIRTYAWPPGLLERFADKHPGLSAAASGQVEQALRQFFLVHLRSDCGYV 80 Query: 85 SMPSQAADDLWHEFILYTREYDAFCRRAFGGFLHHTPAVVLVKERRRSNEGLRRVWWYCC 144 SMPS+ ADDLWHEFILYTREY FCRRAFG FLHH P+ L R+ SN GLRR W + C Sbjct: 81 SMPSRVADDLWHEFILYTREYRDFCRRAFGKFLHHLPSAALSPVRKPSNIGLRRTWTWAC 140 Query: 145 KYENIDPVRPTRLPLLFALDAKLNIANGFIYHTDCETLRRSGIGGSSPYCGGDFSDSSID 204 E+I P RP RLPLLFA+DAKL I NGF Y DC + G + +CG DFS +D Sbjct: 141 HDEDIHPRRPDRLPLLFAIDAKLAIPNGFFYLPDCAKRQH---GSETVHCGADFSSRHVD 197 Query: 205 GSSAGFG 211 GS AGFG Sbjct: 198 GSIAGFG 204 >emb|CAQ18201.1| conserved hypothetical protein [Ralstonia solanacearum MolK2] Length = 216 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 103/187 (55%), Positives = 121/187 (64%), Gaps = 3/187 (1%) Query: 25 FGKWQTLRRAEYIRTFHWPAGLLARLEKRHPGFTRKDSALVSRGLRQFFLAYLMSGKRYV 84 +G W+ RR ++IRT+ WP GLL R ++ P + D V + LRQFFL +L S YV Sbjct: 7 WGAWRRKRREDFIRTYKWPPGLLERFSEKRPELSAADRRHVEQALRQFFLVHLRSDCEYV 66 Query: 85 SMPSQAADDLWHEFILYTREYDAFCRRAFGGFLHHTPAVVLVKERRRSNEGLRRVWWYCC 144 SMPS+ DDLWHEFILYTREY FC RAFG FLHH P+ L RR+SN GLRR WW+ C Sbjct: 67 SMPSRVVDDLWHEFILYTREYRDFCSRAFGKFLHHLPSAALSPVRRQSNIGLRRAWWWAC 126 Query: 145 KYENIDPVRPTRLPLLFALDAKLNIANGFIYHTDCETLRRSGIGGSSPYCGGDFSDSSID 204 + E I P RP RLPLLFA+D KL I NGF Y DC R +GG + CG DF ID Sbjct: 127 RDEGIHPRRPDRLPLLFAIDRKLAIPNGFFYLPDCA---RRQVGGETMQCGADFCSRHID 183 Query: 205 GSSAGFG 211 GS GFG Sbjct: 184 GSIEGFG 190 >ref|YP_003748852.1| hypothetical protein RCFBP_mp30401 [Ralstonia solanacearum CFBP2957] emb|CBJ54484.1| conserved membrane protein of unknown function [Ralstonia solanacearum CFBP2957] Length = 229 Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 106/199 (53%), Positives = 126/199 (63%), Gaps = 6/199 (3%) Query: 16 AAVVGSAVLFGK---WQTLRRAEYIRTFHWPAGLLARLEKRHPGFTRKDSALVSRGLRQF 72 A VG ++ GK W+ RR ++IRT+ WP GLL R ++ PG + D V + LRQF Sbjct: 8 TAGVGLMLVLGKGGAWRRKRREDFIRTYKWPPGLLERFSEKRPGLSVADRGHVEQALRQF 67 Query: 73 FLAYLMSGKRYVSMPSQAADDLWHEFILYTREYDAFCRRAFGGFLHHTPAVVLVKERRRS 132 FL +L S YVSMPS+ ADDLWHEFILYTREY FC RAFG FLHH P+ L R++S Sbjct: 68 FLVHLRSDCEYVSMPSRVADDLWHEFILYTREYRDFCSRAFGKFLHHLPSAALSPVRKQS 127 Query: 133 NEGLRRVWWYCCKYENIDPVRPTRLPLLFALDAKLNIANGFIYHTDCETLRRSGIGGSSP 192 N GLRR W + C+ E I P RP RLPLLFA+D KL I NGF Y DC + GG + Sbjct: 128 NIGLRRTWSWACRDEGIHPRRPDRLPLLFAIDRKLAIPNGFFYLPDCA---KRQAGGETL 184 Query: 193 YCGGDFSDSSIDGSSAGFG 211 CG DF IDGS GFG Sbjct: 185 QCGADFCSRHIDGSIEGFG 203