BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0095.0029.p         (76 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001204061.1| hypothetical protein BRADO1962 [Bradyrhizobi...   124   5e-27
ref|YP_001238353.1| hypothetical protein BBta_2269 [Bradyrhizobi...   122   1e-26
ref|YP_568432.1| double-transmembrane region-like protein [Rhodo...   121   4e-26
ref|ZP_08628626.1| putative membrane protein [Bradyrhizobiaceae ...   115   2e-24
ref|NP_769103.1| hypothetical protein bll2463 [Bradyrhizobium ja...   115   2e-24

>ref|YP_001204061.1| hypothetical protein BRADO1962 [Bradyrhizobium sp. ORS 278]
 emb|CAL75824.1| conserved hypothetical protein; putative membrane protein
          [Bradyrhizobium sp. ORS 278]
          Length = 937

 Score =  124 bits (311), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 61/65 (93%), Positives = 63/65 (96%)

Query: 4  GLPLSFAEPLLLLGLVSLPVLWWLLRVMPPRPRRIEFPPTRLLFDIAPKEETPSRTPWWL 63
          GLPLSFAEPLLL GL+SLPVLWWLLRVMPPRPRRIEFPPTRLLFDI PKEETPSR+PWWL
Sbjct: 3  GLPLSFAEPLLLTGLISLPVLWWLLRVMPPRPRRIEFPPTRLLFDITPKEETPSRSPWWL 62

Query: 64 TLLRL 68
          TLLRL
Sbjct: 63 TLLRL 67


>ref|YP_001238353.1| hypothetical protein BBta_2269 [Bradyrhizobium sp. BTAi1]
 gb|ABQ34447.1| putative membrane protein of unknown function [Bradyrhizobium sp.
          BTAi1]
          Length = 940

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/65 (92%), Positives = 63/65 (96%)

Query: 4  GLPLSFAEPLLLLGLVSLPVLWWLLRVMPPRPRRIEFPPTRLLFDIAPKEETPSRTPWWL 63
          GLPLSFAEPLLL GL+SLPVLWWLLRVMPPRPRRIEFPPTRLLFDI P+EETPSR+PWWL
Sbjct: 3  GLPLSFAEPLLLTGLISLPVLWWLLRVMPPRPRRIEFPPTRLLFDITPREETPSRSPWWL 62

Query: 64 TLLRL 68
          TLLRL
Sbjct: 63 TLLRL 67


>ref|YP_568432.1| double-transmembrane region-like protein [Rhodopseudomonas
          palustris BisB5]
 gb|ABE38531.1| Double-transmembrane region-like [Rhodopseudomonas palustris
          BisB5]
          Length = 941

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/68 (85%), Positives = 64/68 (94%)

Query: 1  MIAGLPLSFAEPLLLLGLVSLPVLWWLLRVMPPRPRRIEFPPTRLLFDIAPKEETPSRTP 60
          MI GLPLSFAEPLLL+GLV+LP LWWLLRV PPRPRRI+FPPTRLLF+IAP+EETPSRTP
Sbjct: 1  MIGGLPLSFAEPLLLIGLVALPALWWLLRVTPPRPRRIDFPPTRLLFEIAPREETPSRTP 60

Query: 61 WWLTLLRL 68
          WWLT LR+
Sbjct: 61 WWLTALRM 68


>ref|ZP_08628626.1| putative membrane protein [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP08691.1| putative membrane protein [Bradyrhizobiaceae bacterium SG-6C]
          Length = 954

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 4  GLPLSFAEPLLLLGLVSLPVLWWLLRVMPPRPRRIEFPPTRLLFDIAPKEETPSRTPWWL 63
          GLPLSFAEP LL GL+SLP LWWLLRVMPPRPRR++FPPTRLLFDI PKEETPSR+PWWL
Sbjct: 3  GLPLSFAEPWLLAGLLSLPALWWLLRVMPPRPRRVDFPPTRLLFDIVPKEETPSRSPWWL 62

Query: 64 TLLR 67
          TLLR
Sbjct: 63 TLLR 66


>ref|NP_769103.1| hypothetical protein bll2463 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47728.1| bll2463 [Bradyrhizobium japonicum USDA 110]
          Length = 937

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/59 (93%), Positives = 58/59 (98%)

Query: 4  GLPLSFAEPLLLLGLVSLPVLWWLLRVMPPRPRRIEFPPTRLLFDIAPKEETPSRTPWW 62
          GLPL+F EPLLL+GLVSLPVLWWLLRVMPPRPRRIEFPPTRLLFDIAP+EETPSRTPWW
Sbjct: 3  GLPLAFTEPLLLIGLVSLPVLWWLLRVMPPRPRRIEFPPTRLLFDIAPREETPSRTPWW 61